Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G144700 Phaseolus vulgaris HOM05D006175 ORTHO05D008081 3.6e-310 1067.4 530 100.0
VMungo0464G1920 Vigna mungo HOM05D006175 ORTHO05D008081 3.6e-278 961.1 538 89.4
Glyma.16G218700 Glycine max HOM05D006175 ORTHO05D008081 1.2e-260 902.9 530 84.7
Lj2g0014656 Lotus japonicus HOM05D006175 ORTHO05D008081 3.1e-253 878.2 538 81.6
arahy.Tifrunner.gnm1.ann1.R57YID Arachis hypogaea HOM05D006175 ORTHO05D008081 7.1e-250 867.1 538 81.8
arahy.Tifrunner.gnm1.ann1.SV5NHS Arachis hypogaea HOM05D006175 ORTHO05D008081 3.3e-247 858.2 547 80.3
Cfa020669 Carpinus fangiana HOM05D006175 ORTHO05D008081 2.8e-246 855.1 529 79.4
Eucgr.H00594 Eucalyptus grandis HOM05D006175 ORTHO05D008081 6.9e-245 850.5 531 77.8
CiPaw.15G150200 Carya illinoinensis HOM05D006175 ORTHO05D008081 3.4e-244 848.2 536 78.0
Ciclev10019690m.g Citrus clementina HOM05D006175 ORTHO05D008081 1.6e-241 839.3 530 77.0
QL10p033089 Quercus lobata HOM05D006175 ORTHO05D008081 2.1e-241 839.0 561 75.0
Potri.012G039300 Populus trichocarpa HOM05D006175 ORTHO05D008081 8.7e-240 833.6 536 75.6
TWI60G0630 Tripterygium wilfordii HOM05D006175 ORTHO05D008081 1.3e-238 829.7 530 76.2
Gohir.D05G004300 Gossypium hirsutum HOM05D006175 ORTHO05D008081 2.4e-237 825.5 530 75.3
CANSAT01G2997 Cannabis sativa HOM05D006175 ORTHO05D008081 1.5e-236 822.8 534 74.7
Gohir.A05G003900 Gossypium hirsutum HOM05D006175 ORTHO05D008081 5.8e-236 820.8 530 74.9
MELO3C001937.2 Cucumis melo HOM05D006175 ORTHO05D008081 1.7e-235 819.3 529 75.4
Thecc.03G068300 Theobroma cacao HOM05D006175 ORTHO05D008081 2.9e-235 818.5 525 75.2
Duzib168G0906 Durio zibethinus HOM05D006175 ORTHO05D008081 1.4e-234 816.2 559 71.7
GSVIVG01008158001 Vitis vinifera HOM05D006175 ORTHO05D008081 1.9e-234 815.8 530 75.1
Atru.chr3.1303 Acer truncatum HOM05D006175 ORTHO05D008081 2.5e-234 815.5 530 74.3
PGR083G2599 Punica granatum HOM05D006175 ORTHO05D008081 1.2e-233 813.1 530 74.5
Sed0010232 Sechium edule HOM05D006175 ORTHO05D008081 7.9e-233 810.4 527 74.8
ClCG04G012690 Citrullus lanatus HOM05D006175 ORTHO05D008081 1.0e-232 810.1 535 75.0
CsaV3_1G032270 Cucumis sativus L. HOM05D006175 ORTHO05D008081 2.3e-232 808.9 530 75.3
Cc04_g09090 Coffea canephora HOM05D006175 ORTHO05D008081 5.1e-232 807.7 533 74.5
Gorai.009G004100 Gossypium raimondii HOM05D006175 ORTHO05D008081 1.1e-231 806.6 535 74.0
FvH4_5g17980 Fragaria vesca HOM05D006175 ORTHO05D008081 2.9e-227 792.0 526 74.1
Oeu019145.1 Olea europaea HOM05D006175 ORTHO05D008081 2.1e-225 785.8 542 72.0
Medtr6g075170 Medicago truncatula HOM05D006175 ORTHO05D008081 1.0e-224 783.5 534 73.8
TPR.G28014 Trifolium pratense HOM05D006175 ORTHO05D008081 1.0e-224 783.5 556 71.4
PGSC0003DMG400031043 Solanum tuberosum HOM05D006175 ORTHO05D008081 1.3e-224 783.1 532 72.0
Solyc03g098250.4 Solanum lycopersicum HOM05D006175 ORTHO05D008081 3.9e-224 781.6 532 71.8
DCAR_023267 Daucus carota HOM05D006175 ORTHO05D008081 8.7e-224 780.4 571 68.0
Sabra12G0027800 Salix brachista HOM05D006175 ORTHO05D008081 1.5e-223 779.6 540 72.0
RcHm_v2.0_Chr7g0177621 Rosa chinensis HOM05D006175 ORTHO05D008081 2.5e-223 778.9 545 72.8
Migut.O00238 Erythranthe guttata HOM05D006175 ORTHO05D008081 5.7e-223 777.7 537 72.1
Sopen03g028960 Solanum pennellii HOM05D006175 ORTHO05D008081 2.0e-220 769.2 532 71.2
Thhalv10001961m.g Eutrema salsugineum HOM05D006175 ORTHO05D008081 1.2e-217 760.0 528 71.0
SHI32102 Sapria himalayana HOM05D006175 ORTHO05D008081 1.6e-217 759.6 565 67.3
THA.LOC104810934 Tarenaya hassleriana HOM05D006175 ORTHO05D008081 4.6e-217 758.1 530 69.2
SpUn0288_0010 Schrenkiella parvula HOM05D006175 ORTHO05D008081 6.1e-217 757.7 528 70.8
PSO782G5703 Papaver somniferum HOM05D006175 ORTHO05D008081 1.8e-216 756.1 525 69.9
AT5G22110 Arabidopsis thaliana HOM05D006175 ORTHO05D008081 3.0e-216 755.4 526 71.1
PSO063G7422 Papaver somniferum HOM05D006175 ORTHO05D008081 3.9e-216 755.0 525 69.7
Zm00001eb037700 Zea mays HOM05D006175 ORTHO05D008081 6.7e-216 754.2 530 69.1
AL6G33090 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 1.1e-215 753.4 526 71.3
Manes.03G098800 Manihot esculenta HOM05D006175 ORTHO05D008081 1.1e-215 753.4 491 75.8
Prupe.8G055400 Prunus persica HOM05D006175 ORTHO05D008081 1.1e-215 753.4 536 69.6
CAN.G637.8 Capsicum annuum HOM05D006175 ORTHO05D008081 4.3e-215 751.5 533 70.0
TAR622G0246 Trochodendron aralioides HOM05D006175 ORTHO05D008081 2.2e-214 749.2 504 73.6
Carub.0006s1975 Capsella rubella HOM05D006175 ORTHO05D008081 2.8e-214 748.8 530 70.8
Lsat_1_v5_gn_2_15241 Lactuca sativa HOM05D006175 ORTHO05D008081 1.4e-213 746.5 529 69.8
Aa31LG1G13320 Aethionema arabicum HOM05D006175 ORTHO05D008081 1.8e-213 746.1 526 69.8
Dinv02367 Davidia involucrata HOM05D006175 ORTHO05D008081 5.3e-213 744.6 535 71.0
Aqoxy2G03817 Aquilegia oxysepala HOM05D006175 ORTHO05D008081 1.2e-212 743.4 532 68.0
Peaxi162Scf00171g00431 Petunia axillaris HOM05D006175 ORTHO05D008081 4.2e-210 734.9 537 68.9
SalBow5G1258 Salvia bowleyana HOM05D006175 ORTHO05D008081 1.2e-209 733.4 545 67.2
ECA238G0751 Erigeron canadensis HOM05D006175 ORTHO05D008081 4.7e-209 731.5 527 68.7
SGA_v2.0_scaffold90G27775 Striga asiatica HOM05D006175 ORTHO05D008081 7.9e-209 730.7 532 68.0
MD06G1235400 Malus domestica HOM05D006175 ORTHO05D008081 1.4e-208 729.9 535 68.4
Cpa.g.sc103.12 Carica papaya HOM05D006175 ORTHO05D008081 9.7e-207 723.8 524 68.9
Os05g0160800 Oryza sativa ssp. japonica HOM05D006175 ORTHO05D008081 6.3e-206 721.1 504 69.4
C03p31990 Brassica napus HOM05D006175 ORTHO05D008081 1.1e-205 720.3 528 68.6
BcaC01g04929 Brassica carinata HOM05D006175 ORTHO05D008081 1.8e-205 719.5 528 68.6
BolC3t15542H Brassica oleracea HOM05D006175 ORTHO05D008081 3.1e-205 718.8 528 68.6
BcaB01g03058 Brassica carinata HOM05D006175 ORTHO05D008081 4.1e-205 718.4 528 68.6
A03p26700 Brassica napus HOM05D006175 ORTHO05D008081 7.0e-205 717.6 527 68.3
EL10Ac3g05085 Beta vulgaris HOM05D006175 ORTHO05D008081 2.2e-203 712.6 531 65.9
CSS0011699 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D008081 2.9e-203 712.2 548 66.4
Sc10g0008900 Simmondsia chinensis HOM05D006175 ORTHO05D008081 5.0e-203 711.4 532 66.2
SEGI_25528 Sequoiadendron giganteum HOM05D006175 ORTHO05D008081 8.5e-203 710.7 533 64.7
BraA03t11882Z Brassica rapa HOM05D006175 ORTHO05D008081 7.2e-202 707.6 530 67.7
vmacro03513 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 1.5e-191 673.3 605 58.7
Lj5A165T85 Lonicera japonica HOM05D006175 ORTHO05D008081 2.6e-191 672.5 482 70.3
Nitab4.5_0005973g0040 Nicotiana tabacum HOM05D006175 ORTHO05D008081 3.7e-190 668.7 552 62.9
Haze_18963 Corylus avellana HOM05D006175 ORTHO05D008081 7.7e-188 661.0 528 65.0
COL.COLO4_27108 Corchorus olitorius HOM05D006175 ORTHO05D008081 1.0e-187 660.6 511 65.8
Ah.04g156800 Amaranthus hybridus HOM05D006175 ORTHO05D008081 1.0e-176 624.0 531 58.9
Hund09784 Selenicereus undatus HOM05D006175 ORTHO05D008081 2.9e-174 615.9 531 60.5
Pp3c16_3220 Physcomitrium patens HOM05D006175 ORTHO05D008081 3.9e-171 605.5 525 55.0
SMO089G0008 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 5.6e-170 601.7 528 55.7
AUR62002056 Chenopodium quinoa HOM05D006175 ORTHO05D008081 4.0e-168 595.5 584 55.7
Nitab4.5_0001180g0190 Nicotiana tabacum HOM05D006175 ORTHO05D008081 1.2e-167 594.0 541 58.2
Mapoly0003s0120 Marchantia polymorpha HOM05D006175 ORTHO05D008081 5.0e-163 578.6 524 53.4
ATR0598G269 Amborella trichopoda HOM05D006175 ORTHO05D008081 1.9e-162 576.6 533 56.7
AUR62028170 Chenopodium quinoa HOM05D006175 ORTHO05D008081 2.3e-160 569.7 532 56.0
vmacro01251 Vaccinium macrocarpon HOM05D006175 ORTHO05D008081 2.9e-158 562.8 633 50.9
Lalb_Chr22g0353691 Lupinus albus HOM05D006175 ORTHO05D008081 1.1e-157 560.8 301 88.4
Prupe.5G240100 Prunus persica HOM05D006175 ORTHO05D008081 1.1e-157 560.8 556 56.1
HPP92_019162 Vanilla planifolia HOM05D006175 ORTHO05D008081 1.1e-157 560.8 525 55.8
SMO200G0091 Selaginella moellendorffii HOM05D006175 ORTHO05D008081 5.2e-152 542.0 532 50.6
AagrBONN_evm.TU.Sc2ySwM_369.495 Anthoceros agrestis HOM05D006175 ORTHO05D008081 3.3e-138 496.1 523 48.0
HanXRQChr05g0129731 Helianthus annuus HOM05D006175 ORTHO05D008081 2.8e-137 493.0 316 73.7
Psat6g072600 Pisum sativum HOM05D006175 ORTHO05D008081 1.9e-133 480.3 558 51.6
Rhsim06G0000100 Rhododendron simsii HOM05D006175 ORTHO05D008081 4.8e-129 465.7 300 71.7
HanXRQChr11g0338981 Helianthus annuus HOM05D006175 ORTHO05D008081 9.9e-127 458.0 301 72.8
MD14G1242400 Malus domestica HOM05D006175 ORTHO05D008081 3.8e-126 456.1 447 55.0
unitig_0.g1094 Utricularia gibba HOM05D006175 ORTHO05D008081 5.7e-114 415.6 564 44.9
Glyma.09G169100 Glycine max HOM05D006175 ORTHO05D008081 7.4e-114 415.2 303 70.6
FAN18G1603 Fragaria x ananassa HOM05D006175 ORTHO05D008081 2.9e-110 403.3 244 79.5
MCO14G014 Micromonas commoda HOM05D006175 ORTHO05D008081 3.6e-92 343.2 640 31.7
AL4G26880 Arabidopsis lyrata HOM05D006175 ORTHO05D008081 5.5e-85 319.3 371 49.6
Lalb_Chr22g0353701 Lupinus albus HOM05D006175 ORTHO05D008081 1.0e-78 298.5 215 73.5
Cre10.g424200 Chlamydomonas reinhardtii HOM05D006175 ORTHO05D008081 1.9e-77 294.3 497 36.4
VMungo1215G0683 Vigna mungo HOM05D006175 ORTHO05D008081 3.8e-70 270.0 217 63.6
HanXRQChr05g0129721 Helianthus annuus HOM05D006175 ORTHO05D008081 1.3e-65 255.0 211 64.0
PRCOL_00003367 Prasinoderma coloniale HOM05D006175 ORTHO05D008081 1.1e-64 251.9 570 30.5
HanXRQChr11g0338971 Helianthus annuus HOM05D006175 ORTHO05D008081 7.0e-64 249.2 211 63.0
FAN04G2119 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.9e-61 241.1 208 62.5
FAN08G2730 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.6e-60 238.0 208 61.5
FAN13G0892 Fragaria x ananassa HOM05D006175 ORTHO05D008081 1.6e-60 238.0 208 61.5
AUR62043421 Chenopodium quinoa HOM05D006175 ORTHO05D008081 3.7e-57 226.9 171 63.2
CDE04G1443 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.6e-44 184.9 104 82.7
Ca_23674_v3 Cicer arietinum L. HOM05D006175 ORTHO05D008081 5.1e-38 163.3 185 51.9
CDE04G2185 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 7.3e-37 159.5 85 83.5
Thecc.10G092900 Theobroma cacao HOM05D006175 ORTHO05D008952 9.6e-29 132.5 131 52.7
CDE04G3312 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 1.5e-26 125.2 324 29.6
CSS0024377 Camellia sinensis var. sinensis HOM05D006175 ORTHO05D043346 6.0e-15 86.7 51 82.4
Thecc.04G242900 Theobroma cacao HOM05D006175 ORTHO05D008081 6.7e-14 83.2 48 83.3
CDE04G3394 Ceratophyllum demersum HOM05D006175 ORTHO05D008081 6.2e-12 76.6 100 49.0
TPR.G28017 Trifolium pratense HOM05D006175 ORTHO05D008081 2.2e-09 68.2 62 54.8
BcaC05g28616 Brassica carinata HOM05D002760 ORTHO05D001361 3.8e-09 67.4 31 90.3
A07p06810 Brassica napus HOM05D002760 ORTHO05D003169 3.8e-09 67.4 31 90.3
BNapus_Darmor_BZH_scaffold_38p01460 Brassica napus HOM05D002760 ORTHO05D003169 3.8e-09 67.4 31 90.3
BraA03t12607Z Brassica rapa HOM05D002760 ORTHO05D003169 3.8e-09 67.4 31 90.3
C05p47240 Brassica napus HOM05D002760 ORTHO05D003169 1.1e-08 65.9 31 87.1
Gohir.D04G101160 Gossypium hirsutum HOM05D006175 ORTHO05D047312 1.9e-08 65.1 69 53.6
Gorai.009G404500 Gossypium raimondii HOM05D006175 ORTHO05D047312 1.9e-08 65.1 70 52.9
Nn2g11046 Nelumbo nucifera HOM05D006175 ORTHO05D008081 1.6e-07 62.0 50 60.0


User provided reference genes

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