Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 3.7e-73 278.1 138 100.0
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 4.6e-68 261.2 138 94.2
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 1.3e-65 253.1 138 89.9
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 8.2e-65 250.4 137 90.5
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.8e-64 249.2 138 89.1
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 4.5e-63 244.6 136 88.2
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 1.9e-61 239.2 137 86.9
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 3.2e-61 238.4 135 85.9
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 7.2e-61 237.3 135 86.7
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 9.4e-61 236.9 136 84.6
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 3.6e-60 235.0 134 84.3
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 8.8e-59 230.3 131 85.5
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 1.5e-58 229.6 128 88.3
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 2.0e-58 229.2 135 84.4
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 2.6e-58 228.8 128 87.5
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 2.6e-58 228.8 134 83.6
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 9.7e-58 226.9 137 83.9
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 9.7e-58 226.9 137 83.9
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 3.7e-57 224.9 134 82.1
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 1.1e-56 223.4 131 85.5
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 1.8e-56 222.6 134 83.6
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 1.8e-56 222.6 134 80.6
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 1.8e-56 222.6 138 81.9
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 1.8e-56 222.6 134 79.9
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 2.4e-56 222.2 134 80.6
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 7.0e-56 220.7 134 81.3
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 9.1e-56 220.3 135 80.0
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 9.1e-56 220.3 135 80.0
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 2.0e-55 219.2 134 81.3
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 2.6e-55 218.8 136 80.1
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 2.6e-55 218.8 133 82.0
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 3.5e-55 218.4 134 79.1
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 3.5e-55 218.4 133 82.7
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 4.5e-55 218.0 134 81.3
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 5.9e-55 217.6 134 81.3
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 1.0e-54 216.9 133 82.7
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.3e-54 216.5 134 80.6
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.2e-54 215.7 134 78.4
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 2.2e-54 215.7 134 80.6
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 2.9e-54 215.3 134 79.9
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 5.0e-54 214.5 135 80.0
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 6.5e-54 214.2 134 76.9
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 6.5e-54 214.2 132 80.3
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 8.5e-54 213.8 135 80.0
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 1.5e-53 213.0 134 79.1
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 1.5e-53 213.0 134 79.1
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 1.5e-53 213.0 133 80.5
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 1.9e-53 212.6 132 77.3
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 1.9e-53 212.6 134 79.1
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 1.9e-53 212.6 133 78.9
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 2.5e-53 212.2 134 77.6
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 2.5e-53 212.2 135 79.3
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 2.5e-53 212.2 135 79.3
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 2.5e-53 212.2 133 80.5
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 2.5e-53 212.2 134 77.6
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 3.2e-53 211.8 133 78.9
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 9.4e-53 210.3 134 75.4
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 9.4e-53 210.3 134 79.9
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 1.6e-52 209.5 134 77.6
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 2.1e-52 209.1 139 74.1
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 6.1e-52 207.6 135 74.8
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 8.0e-52 207.2 119 85.7
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 1.8e-51 206.1 136 75.7
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 2.3e-51 205.7 135 75.6
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 2.3e-51 205.7 131 75.6
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 3.9e-51 204.9 135 74.8
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 3.9e-51 204.9 144 74.3
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 3.9e-51 204.9 134 77.6
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 5.2e-51 204.5 134 76.9
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 8.8e-51 203.8 133 77.4
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.1e-50 203.4 135 74.8
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 2.6e-50 202.2 136 74.3
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 4.4e-50 201.4 138 73.2
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 4.4e-50 201.4 134 76.1
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 7.4e-50 200.7 134 73.1
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 1.3e-49 199.9 130 75.4
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 1.3e-49 199.9 133 72.2
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 1.7e-49 199.5 133 72.2
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 6.3e-49 197.6 135 74.8
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 8.2e-49 197.2 132 72.7
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 1.1e-48 196.8 132 74.2
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.4e-48 196.4 135 74.8
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 1.8e-48 196.1 134 73.1
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 5.3e-48 194.5 134 73.1
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 1.6e-47 193.0 141 68.8
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 1.6e-47 193.0 134 70.9
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 5.9e-47 191.0 134 72.4
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 5.9e-47 191.0 134 72.4
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 1.0e-46 190.3 133 71.4
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 1.7e-46 189.5 140 68.6
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 1.7e-46 189.5 140 68.6
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 1.7e-46 189.5 140 68.6
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 1.7e-46 189.5 140 68.6
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 2.2e-46 189.1 135 72.6
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 3.2e-45 185.3 132 70.5
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 5.5e-45 184.5 136 67.6
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.6e-44 183.0 139 64.7
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 2.3e-43 179.1 116 72.4
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 3.0e-43 178.7 116 74.1
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 3.0e-43 178.7 114 73.7
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 4.0e-43 178.3 115 73.9
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 5.2e-43 177.9 115 74.8
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 8.8e-43 177.2 112 74.1
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 1.2e-42 176.8 109 76.1
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 1.2e-42 176.8 130 66.2
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 1.2e-42 176.8 130 66.2
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 1.5e-42 176.4 115 71.3
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 1.5e-42 176.4 115 71.3
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 1.5e-42 176.4 115 71.3
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 2.0e-42 176.0 115 73.9
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 2.6e-42 175.6 116 72.4
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 4.4e-42 174.9 115 70.4
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 4.4e-42 174.9 115 70.4
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 7.5e-42 174.1 109 74.3
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 1.3e-41 173.3 108 75.0
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 1.7e-41 172.9 113 77.9
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 8.3e-41 170.6 141 65.2
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 1.8e-40 169.5 108 74.1
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 1.2e-39 166.8 119 68.1
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 7.7e-39 164.1 118 75.4
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 7.7e-39 164.1 96 75.0
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 4.2e-37 158.3 90 77.8
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 2.6e-34 149.1 129 58.1
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 7.0e-32 141.0 138 56.5
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 2.3e-30 136.0 83 77.1
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 1.1e-29 133.7 132 55.3
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 2.8e-28 129.0 118 56.8
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 2.0e-26 122.9 122 50.0
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 4.4e-26 121.7 109 58.7
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 3.7e-25 118.6 68 76.5
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 6.3e-25 117.9 136 50.7
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 2.4e-24 115.9 74 83.8
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 5.4e-24 114.8 56 87.5
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 1.3e-22 110.2 81 75.3
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 2.1e-20 102.8 75 74.7
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 2.3e-19 99.4 70 64.3
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 4.0e-19 98.6 93 61.3
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 4.0e-19 98.6 76 64.5
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 6.8e-19 97.8 120 43.3
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 1.5e-18 96.7 60 73.3
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 8.3e-17 90.9 127 42.5
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 1.0e-14 84.0 57 73.7
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 1.0e-14 84.0 56 67.9
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 1.2e-12 77.0 77 53.2
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 1.2e-12 77.0 105 40.0
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 5.2e-11 71.6 140 37.1
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 4.4e-10 68.6 79 54.4
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 2.2e-09 66.2 81 46.9


User provided reference genes

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