Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 1.6e-236 822.4 423 100.0
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 6.5e-222 773.9 423 92.2
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 5.9e-215 750.7 424 89.2
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 4.7e-212 741.1 424 88.2
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 1.1e-197 693.3 425 82.1
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 4.0e-195 684.9 426 81.2
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 2.6e-194 682.2 426 80.3
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 1.3e-193 679.9 426 80.5
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 4.1e-192 674.9 433 79.7
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 1.2e-191 673.3 426 79.8
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 4.0e-187 658.3 424 78.1
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 1.2e-186 656.8 426 78.6
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 2.6e-186 655.6 422 78.2
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 5.8e-186 654.4 426 77.5
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 1.3e-185 653.3 425 76.7
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 1.1e-184 650.2 421 77.7
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 2.1e-183 646.0 425 76.5
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 2.1e-183 646.0 425 77.9
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 4.6e-183 644.8 425 76.7
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 5.1e-182 641.3 425 75.5
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 8.6e-182 640.6 425 75.5
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 5.6e-181 637.9 425 75.8
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 9.5e-181 637.1 425 76.0
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 1.6e-180 636.3 425 76.0
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 3.6e-180 635.2 425 75.5
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 8.1e-180 634.0 425 75.5
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 1.1e-179 633.6 425 75.8
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 4.0e-179 631.7 425 74.6
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 5.2e-179 631.3 425 76.0
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 6.8e-179 630.9 425 74.4
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 8.9e-179 630.6 425 74.6
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 1.5e-178 629.8 425 75.3
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 2.0e-178 629.4 422 75.1
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 2.6e-178 629.0 422 74.6
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 3.4e-178 628.6 425 74.1
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 9.9e-178 627.1 425 73.9
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 3.8e-177 625.2 425 74.8
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 3.2e-176 622.1 422 73.9
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 3.2e-176 622.1 425 73.2
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 1.6e-175 619.8 425 73.6
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 2.7e-175 619.0 422 73.7
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 6.0e-175 617.8 422 73.7
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 5.1e-174 614.8 426 72.3
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 6.6e-174 614.4 422 72.0
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 8.7e-174 614.0 424 73.1
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 8.7e-174 614.0 425 71.5
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.5e-173 613.2 432 71.5
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 1.5e-173 613.2 425 71.5
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 1.9e-173 612.8 425 73.4
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 1.2e-172 610.1 425 70.6
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 2.1e-172 609.4 425 73.9
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 2.8e-172 609.0 426 73.2
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 2.8e-172 609.0 422 73.0
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 6.2e-172 607.8 425 71.5
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 1.1e-171 607.1 426 72.1
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 1.1e-171 607.1 425 72.7
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 2.4e-171 605.9 425 72.7
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 2.4e-171 605.9 425 72.0
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 4.0e-171 605.1 425 70.6
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 2.6e-170 602.4 426 71.8
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 3.4e-170 602.1 426 73.0
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 1.3e-169 600.1 460 70.0
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 1.3e-169 600.1 425 69.2
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 3.8e-169 598.6 422 71.3
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 3.8e-169 598.6 423 72.1
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 4.9e-169 598.2 422 74.4
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 3.2e-168 595.5 464 67.5
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 7.1e-168 594.3 426 70.9
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 5.1e-166 588.2 422 71.8
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 4.3e-165 585.1 423 70.2
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 9.6e-165 583.9 459 67.3
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 9.6e-165 583.9 425 68.2
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 1.6e-164 583.2 402 72.9
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 4.8e-164 581.6 423 69.5
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 2.4e-163 579.3 429 67.8
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 1.9e-160 569.7 425 67.3
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 1.2e-159 567.0 425 68.5
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 8.7e-158 560.8 422 65.9
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 7.4e-157 557.8 424 67.5
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 4.8e-156 555.1 432 66.9
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 5.8e-154 548.1 422 65.2
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 9.9e-154 547.4 425 68.5
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 2.9e-153 545.8 425 66.1
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 2.9e-153 545.8 423 67.8
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 2.4e-152 542.7 426 65.3
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 5.5e-152 541.6 426 65.5
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 4.6e-151 538.5 426 65.3
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 1.8e-150 536.6 424 64.2
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 2.3e-150 536.2 383 70.5
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 3.0e-150 535.8 426 65.7
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 5.1e-150 535.0 425 66.4
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 5.6e-149 531.6 425 66.8
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 6.2e-148 528.1 426 63.6
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 5.3e-147 525.0 425 63.3
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 6.9e-147 524.6 426 64.8
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 1.2e-146 523.9 426 63.8
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 1.5e-146 523.5 426 62.9
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 1.5e-146 523.5 324 79.9
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 2.0e-146 523.1 425 62.8
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 2.0e-146 523.1 426 64.1
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 4.5e-146 521.9 313 82.7
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 5.8e-146 521.5 427 63.0
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 7.6e-146 521.2 427 63.0
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 7.6e-146 521.2 426 62.9
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 4.9e-145 518.5 416 62.7
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 2.1e-143 513.1 426 62.9
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 2.1e-143 513.1 437 64.1
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 3.5e-143 512.3 425 62.1
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 3.5e-143 512.3 425 62.1
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 6.0e-143 511.5 426 62.4
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 1.3e-142 510.4 425 61.9
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 1.8e-142 510.0 425 61.4
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 3.9e-142 508.8 426 62.2
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 5.7e-141 505.0 425 61.2
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 4.8e-140 501.9 425 60.7
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 5.3e-139 498.4 381 67.5
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 1.2e-138 497.3 426 60.6
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 1.2e-138 497.3 425 61.6
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 2.7e-135 486.1 386 65.5
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 3.9e-134 482.3 444 58.8
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 1.9e-133 479.9 424 57.8
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 1.7e-132 476.9 356 66.0
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 3.4e-130 469.2 427 55.5
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 7.9e-127 458.0 427 55.0
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 1.5e-125 453.8 450 52.9
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 1.5e-122 443.7 385 60.3
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 2.2e-113 413.3 396 56.8
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 2.2e-113 413.3 241 87.6
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 1.4e-110 404.1 428 51.9
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 2.4e-107 393.3 239 83.7
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 3.0e-102 376.3 337 60.2
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 7.0e-99 365.2 284 62.7
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 1.2e-95 354.4 410 50.5
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 4.0e-94 349.4 356 54.8
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 4.4e-93 345.9 427 50.4
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 5.1e-73 279.3 430 39.1
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 5.6e-72 275.8 214 65.9
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 5.1e-65 252.7 325 47.1
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 3.4e-61 240.0 190 67.4
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 2.3e-57 227.3 483 33.7
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 1.9e-56 224.2 194 61.9
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 3.6e-55 219.9 357 41.5
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 2.1e-50 204.1 194 56.7
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 3.9e-49 199.9 305 42.0
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 3.2e-43 180.3 250 44.4
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 6.0e-42 176.0 140 57.9
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 1.2e-34 151.8 338 30.8
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 1.4e-30 138.3 150 49.3
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 2.4e-30 137.5 105 71.4
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.0e-25 122.1 80 63.8
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 9.7e-24 115.5 76 72.4
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 2.4e-22 110.9 75 66.7
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 2.4e-22 110.9 75 66.7
Cfa025081 Carpinus fangiana HOM05D004649 ORTHO05D005446 2.1e-18 97.8 329 24.0
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 2.3e-17 94.4 124 39.5
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 8.2e-15 85.9 63 71.4
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 3.1e-14 84.0 62 64.5
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 9.1e-14 82.4 48 81.2
FvH4_2g01181 Fragaria vesca HOM05D000564 ORTHO05D005446 1.1e-11 75.5 53 77.4
ECA232G4246 Erigeron canadensis HOM05D004649 ORTHO05D005446 3.0e-09 67.4 75 48.0
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 1.1e-08 65.5 49 65.3
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 1.1e-08 65.5 49 65.3
AT1G75990 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 4.4e-08 63.5 207 28.0
AL2G36010 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 7.4e-08 62.8 207 28.0
Carub.0002s2288 Capsella rubella HOM05D002716 ORTHO05D003324 9.7e-08 62.4 207 27.5
BcaC08g47308 Brassica carinata HOM05D002716 ORTHO05D003324 1.3e-07 62.0 213 27.2
C06p49910 Brassica napus HOM05D002716 ORTHO05D003324 1.3e-07 62.0 213 27.2
BolC6t40029H Brassica oleracea HOM05D002716 ORTHO05D003324 1.3e-07 62.0 213 27.2
Thhalv10007479m.g Eutrema salsugineum HOM05D002716 ORTHO05D003324 2.2e-07 61.2 204 26.5
A07p41500 Brassica napus HOM05D002716 ORTHO05D003324 2.8e-07 60.8 213 26.8
BraA07t31682Z Brassica rapa HOM05D002716 ORTHO05D003324 2.8e-07 60.8 213 26.8
Sp1g17970 Schrenkiella parvula HOM05D002716 ORTHO05D003324 3.7e-07 60.5 204 26.5
Sp5g31110 Schrenkiella parvula HOM05D002716 ORTHO05D003324 3.7e-07 60.5 213 26.3
Carub.0001s1973 Capsella rubella HOM05D002716 ORTHO05D003324 4.8e-07 60.1 204 26.5
CARHR020700 Cardamine hirsuta HOM05D002716 ORTHO05D003324 4.8e-07 60.1 204 26.5
AT1G20200 Arabidopsis thaliana HOM05D002716 ORTHO05D003324 6.3e-07 59.7 204 26.5
EL10As11g23980 Beta vulgaris HOM05D004649 ORTHO05D005446 6.3e-07 59.7 38 65.8
BcaB03g12876 Brassica carinata HOM05D002716 ORTHO05D003324 6.3e-07 59.7 204 26.5
AL1G33040 Arabidopsis lyrata HOM05D002716 ORTHO05D003324 8.2e-07 59.3 204 26.5
CARHR069530 Cardamine hirsuta HOM05D002716 ORTHO05D003324 1.1e-06 58.9 207 26.6
Nn4g22394 Nelumbo nucifera HOM05D004649 ORTHO05D005446 3.1e-06 57.4 49 61.2
BcaC07g39026 Brassica carinata HOM05D002716 ORTHO05D003324 4.1e-06 57.0 204 26.0
C08p20020 Brassica napus HOM05D002716 ORTHO05D003324 4.1e-06 57.0 204 26.0
BolC8t49637H Brassica oleracea HOM05D002716 ORTHO05D003324 4.1e-06 57.0 204 26.0


User provided reference genes

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