Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G262700 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 1.1e-174 616.7 343 100.0
VMungo0251G1454 Vigna mungo HOM05D001533 ORTHO05D005122 1.7e-164 582.8 343 94.2
Glyma.02G049100 Glycine max HOM05D001533 ORTHO05D005122 4.3e-155 551.6 343 89.8
Lj4g0002557 Lotus japonicus HOM05D001533 ORTHO05D005122 1.7e-151 539.7 345 84.6
Glyma.16G129200 Glycine max HOM05D001533 ORTHO05D005122 3.5e-149 531.9 343 86.9
Ca_22369_v3 Cicer arietinum L. HOM05D001533 ORTHO05D005122 1.6e-141 506.5 345 82.6
TPR.G30063 Trifolium pratense HOM05D001533 ORTHO05D005122 3.9e-140 501.9 345 78.6
Thecc.01G020200 Theobroma cacao HOM05D001533 ORTHO05D005122 9.6e-139 497.3 345 77.1
Ciclev10025997m.g Citrus clementina HOM05D001533 ORTHO05D005122 4.7e-138 495.0 345 75.9
COL.COLO4_21923 Corchorus olitorius HOM05D001533 ORTHO05D005122 3.1e-137 492.3 344 77.0
Prupe.7G167200 Prunus persica HOM05D001533 ORTHO05D005122 3.1e-137 492.3 340 76.8
vmacro18418 Vaccinium macrocarpon HOM05D001533 ORTHO05D005122 2.0e-136 489.6 337 75.4
MD02G1133400 Malus domestica HOM05D001533 ORTHO05D005122 2.6e-136 489.2 345 76.2
QL06p033501 Quercus lobata HOM05D001533 ORTHO05D005122 3.4e-136 488.8 344 76.7
Rhsim08G0034200 Rhododendron simsii HOM05D001533 ORTHO05D005122 5.8e-136 488.0 340 75.0
Phvul.002G109200 Phaseolus vulgaris HOM05D001533 ORTHO05D005122 9.9e-136 487.3 345 77.1
Glyma.01G166700 Glycine max HOM05D001533 ORTHO05D005122 8.4e-135 484.2 345 76.5
VMungo1215G1138 Vigna mungo HOM05D001533 ORTHO05D005122 5.4e-134 481.5 345 76.2
Haze_03774 Corylus avellana HOM05D001533 ORTHO05D005122 7.1e-134 481.1 330 77.3
TWI53G2031 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 1.2e-133 480.3 340 75.9
Cfa006964 Carpinus fangiana HOM05D001533 ORTHO05D005122 1.6e-133 479.9 330 77.0
Lj2g0008453 Lotus japonicus HOM05D001533 ORTHO05D005122 2.1e-133 479.6 345 76.2
Cpa.g.sc6.238 Carica papaya HOM05D001533 ORTHO05D005122 3.5e-133 478.8 340 74.1
MELO3C016393.2 Cucumis melo HOM05D001533 ORTHO05D005122 3.5e-133 478.8 340 75.6
TWI09G0584 Tripterygium wilfordii HOM05D001533 ORTHO05D005122 7.8e-133 477.6 337 75.4
CiPaw.07G057700 Carya illinoinensis HOM05D001533 ORTHO05D005122 1.1e-131 473.8 332 73.5
CsaV3_4G005560 Cucumis sativus L. HOM05D001533 ORTHO05D005122 3.3e-131 472.2 340 74.7
RcHm_v2.0_Chr2g0099581 Rosa chinensis HOM05D001533 ORTHO05D005122 7.3e-131 471.1 345 73.6
CiPaw.08G132200 Carya illinoinensis HOM05D001533 ORTHO05D005122 1.3e-130 470.3 340 72.4
Manes.01G145100 Manihot esculenta HOM05D001533 ORTHO05D005122 1.6e-130 469.9 340 74.1
ClCG07G008590 Citrullus lanatus HOM05D001533 ORTHO05D005122 3.1e-129 465.7 330 75.8
FvH4_1g11960 Fragaria vesca HOM05D001533 ORTHO05D005122 5.3e-129 464.9 337 73.3
FAN19G0503 Fragaria x ananassa HOM05D001533 ORTHO05D005122 1.5e-128 463.4 337 73.0
Potri.005G115500 Populus trichocarpa HOM05D001533 ORTHO05D005122 1.5e-128 463.4 344 73.3
Dinv33621 Davidia involucrata HOM05D001533 ORTHO05D005122 2.6e-128 462.6 345 73.6
FAN26G0519 Fragaria x ananassa HOM05D001533 ORTHO05D005122 4.5e-128 461.8 337 72.7
Duzib187G1725 Durio zibethinus HOM05D001533 ORTHO05D005122 5.8e-128 461.5 345 71.6
FAN28G1062 Fragaria x ananassa HOM05D001533 ORTHO05D005122 5.8e-128 461.5 337 72.7
Potri.007G012600 Populus trichocarpa HOM05D001533 ORTHO05D005122 5.8e-128 461.5 344 72.7
TAR381G0830 Trochodendron aralioides HOM05D001533 ORTHO05D005122 5.8e-128 461.5 345 71.6
Cc00_g26600 Coffea canephora HOM05D001533 ORTHO05D005122 9.9e-128 460.7 345 71.3
Actinidia31002 Actinidia chinensis HOM05D001533 ORTHO05D005122 1.3e-127 460.3 340 72.1
Sabra05G0094600 Salix brachista HOM05D001533 ORTHO05D005122 1.7e-127 459.9 373 68.6
FAN23G2041 Fragaria x ananassa HOM05D001533 ORTHO05D005122 6.4e-127 458.0 337 72.1
Peaxi162Scf00083g00714 Petunia axillaris HOM05D001533 ORTHO05D005122 6.4e-127 458.0 340 70.9
Sed0027203 Sechium edule HOM05D001533 ORTHO05D005122 6.4e-127 458.0 337 73.9
Nitab4.5_0006286g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.9e-126 456.4 340 70.9
CSS0008566 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 2.7e-125 452.6 317 77.3
Glyma.11G076600 Glycine max HOM05D001533 ORTHO05D005122 6.0e-125 451.4 331 75.5
Gorai.003G010300 Gossypium raimondii HOM05D001533 ORTHO05D005122 4.3e-123 445.3 345 71.6
CAN.G1671.6 Capsicum annuum HOM05D001533 ORTHO05D005122 5.6e-123 444.9 340 69.7
CAN.G893.6 Capsicum annuum HOM05D001533 ORTHO05D005122 7.4e-123 444.5 340 68.8
Gohir.A02G170000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 4.8e-122 441.8 345 71.0
Nn6g32353 Nelumbo nucifera HOM05D001533 ORTHO05D005122 1.8e-121 439.9 342 70.2
arahy.Tifrunner.gnm1.ann1.H1V2NS Arachis hypogaea HOM05D001533 ORTHO05D005122 6.9e-121 438.0 328 73.8
Solyc02g083990.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 6.9e-121 438.0 337 68.0
Sopen02g028790 Solanum pennellii HOM05D001533 ORTHO05D005122 9.9e-120 434.1 340 66.8
Peaxi162Scf00034g00264 Petunia axillaris HOM05D001533 ORTHO05D005122 1.9e-118 429.9 340 67.9
Nitab4.5_0000438g0040 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.6e-117 426.8 315 69.8
Solyc03g033580.3 Solanum lycopersicum HOM05D001533 ORTHO05D005122 3.5e-117 425.6 340 66.5
CSS0030027 Camellia sinensis var. sinensis HOM05D001533 ORTHO05D005122 1.3e-116 423.7 340 68.2
Sopen03g006360 Solanum pennellii HOM05D001533 ORTHO05D005122 3.0e-116 422.5 340 65.9
Gohir.D03G010000 Gossypium hirsutum HOM05D001533 ORTHO05D005122 8.7e-116 421.0 345 68.7
Duzib264G0112 Durio zibethinus HOM05D001533 ORTHO05D005122 4.3e-115 418.7 345 67.5
SGA_v2.0_scaffold137G35090 Striga asiatica HOM05D001533 ORTHO05D005122 1.6e-114 416.8 345 66.1
PSO170G0469 Papaver somniferum HOM05D001533 ORTHO05D005122 2.1e-114 416.4 341 66.6
MSTRG.2705 Avicennia marina HOM05D001533 ORTHO05D005122 4.8e-114 415.2 319 71.5
Gohir.A11G176200 Gossypium hirsutum HOM05D001533 ORTHO05D005122 1.1e-113 414.1 345 67.8
PSO700G0386 Papaver somniferum HOM05D001533 ORTHO05D005122 4.0e-113 412.1 341 66.0
Lalb_Chr09g0321781 Lupinus albus HOM05D001533 ORTHO05D005122 1.2e-112 410.6 345 68.7
Manes.02G103600 Manihot esculenta HOM05D001533 ORTHO05D005122 7.6e-112 407.9 343 66.5
Hma1.2p1_0743F.1_g211570 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 1.0e-111 407.5 340 66.2
Lalb_Chr05g0229891 Lupinus albus HOM05D001533 ORTHO05D005122 2.9e-111 406.0 345 68.7
Gorai.007G195800 Gossypium raimondii HOM05D001533 ORTHO05D005122 1.9e-110 403.3 345 67.0
Gohir.D11G183900 Gossypium hirsutum HOM05D001533 ORTHO05D005122 2.7e-109 399.4 345 66.7
arahy.Tifrunner.gnm1.ann1.JA3WP2 Arachis hypogaea HOM05D001533 ORTHO05D005122 3.0e-108 396.0 289 74.4
Hma1.2p1_2281F.1_g318810 Hydrangea macrophylla HOM05D001533 ORTHO05D005122 5.1e-108 395.2 284 71.8
Lj2C466T13 Lonicera japonica HOM05D001533 ORTHO05D005122 6.7e-108 394.8 338 65.1
SalBow3G3323 Salvia bowleyana HOM05D001533 ORTHO05D005122 3.3e-107 392.5 389 58.1
Duzib147G0876 Durio zibethinus HOM05D001533 ORTHO05D005122 7.4e-107 391.3 345 64.3
Nitab4.5_0006119g0010 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.6e-106 390.2 336 63.1
Atru.chr3.790 Acer truncatum HOM05D001533 ORTHO05D005122 4.1e-105 385.6 331 65.6
Lalb_Chr16g0377521 Lupinus albus HOM05D001533 ORTHO05D005122 9.0e-105 384.4 345 66.4
CANSAT80G2154 Cannabis sativa HOM05D001533 ORTHO05D005122 2.0e-104 383.3 345 64.1
DCAR_016613 Daucus carota HOM05D001533 ORTHO05D005122 2.0e-104 383.3 328 65.2
Nn5g29330 Nelumbo nucifera HOM05D001533 ORTHO05D005122 2.0e-104 383.3 341 62.5
Eucgr.J02426 Eucalyptus grandis HOM05D001533 ORTHO05D005122 5.0e-103 378.6 346 62.7
TAR628G0959 Trochodendron aralioides HOM05D001533 ORTHO05D005122 5.0e-103 378.6 340 63.5
THA.LOC104804260 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 2.7e-101 372.9 330 61.8
Oeu035307.1 Olea europaea HOM05D001533 ORTHO05D005122 1.8e-100 370.2 340 62.1
THA.LOC104807492 Tarenaya hassleriana HOM05D001533 ORTHO05D005122 3.9e-100 369.0 340 60.9
AUR62043756 Chenopodium quinoa HOM05D001533 ORTHO05D005122 6.7e-100 368.2 345 62.0
AUR62044201 Chenopodium quinoa HOM05D001533 ORTHO05D005122 6.7e-100 368.2 345 62.0
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 1.8e-97 360.1 283 71.4
Psat4g098560 Pisum sativum HOM05D001533 ORTHO05D005122 4.1e-97 359.0 341 63.0
CANSAT01G1879 Cannabis sativa HOM05D001533 ORTHO05D005122 5.3e-97 358.6 336 62.5
Os06g0715400 Oryza sativa ssp. japonica HOM05D001533 ORTHO05D005122 1.5e-96 357.1 328 60.4
AUR62007522 Chenopodium quinoa HOM05D001533 ORTHO05D005122 3.4e-96 355.9 338 60.4
Lj4C217T16 Lonicera japonica HOM05D001533 ORTHO05D005122 1.0e-95 354.4 331 61.0
EL10As8g23833 Beta vulgaris HOM05D001533 ORTHO05D005122 1.3e-95 354.0 367 57.5
ECA246G3074 Erigeron canadensis HOM05D001533 ORTHO05D005122 2.9e-95 352.8 343 59.5
Hund16484 Selenicereus undatus HOM05D001533 ORTHO05D005122 7.2e-94 348.2 345 58.6
Nitab4.5_0001959g0020 Nicotiana tabacum HOM05D001533 ORTHO05D005122 1.4e-92 344.0 282 64.5
PGR119G1411 Punica granatum HOM05D001533 ORTHO05D005122 1.8e-92 343.6 343 60.1
Zm00001eb228040 Zea mays HOM05D001533 ORTHO05D005122 1.8e-92 343.6 326 60.4
Aa31LG1G14750 Aethionema arabicum HOM05D001533 ORTHO05D005122 2.3e-92 343.2 338 57.4
Sp3g31420 Schrenkiella parvula HOM05D001533 ORTHO05D005122 3.9e-92 342.4 348 58.6
GSVIVG01018794001 Vitis vinifera HOM05D001533 ORTHO05D005122 6.7e-92 341.7 340 60.0
PGSC0003DMG400003635 Solanum tuberosum HOM05D001533 ORTHO05D005122 4.4e-91 339.0 261 67.0
AL3G51060 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 4.5e-88 328.9 345 56.2
AT2G17990 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 2.2e-87 326.6 342 56.1
Oeu005320.1 Olea europaea HOM05D001533 ORTHO05D005122 2.9e-87 326.2 294 62.6
Carub.0003s3213 Capsella rubella HOM05D001533 ORTHO05D005122 3.8e-87 325.9 343 55.7
MBI05_g43883_MAGBIO Magnolia biondii HOM05D001533 ORTHO05D005122 1.5e-83 313.9 337 57.0
Thhalv10022777m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 4.4e-83 312.4 335 57.6
Thhalv10004494m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 5.7e-83 312.0 339 53.4
CARHR108480 Cardamine hirsuta HOM05D001533 ORTHO05D005122 9.7e-83 311.2 323 57.3
A07p02680 Brassica napus HOM05D001533 ORTHO05D005122 6.3e-82 308.5 341 56.3
BraA07t28064Z Brassica rapa HOM05D001533 ORTHO05D005122 6.3e-82 308.5 341 56.3
CDE02G4489 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 2.4e-81 306.6 337 53.7
CDE04G1263 Ceratophyllum demersum HOM05D001533 ORTHO05D005122 4.1e-81 305.8 334 52.7
Aqoxy6G02302 Aquilegia oxysepala HOM05D001533 ORTHO05D005122 1.2e-80 304.3 325 56.3
C07p04980 Brassica napus HOM05D001533 ORTHO05D005122 1.6e-80 303.9 341 55.4
BcaC06g36351 Brassica carinata HOM05D001533 ORTHO05D005122 4.5e-80 302.4 341 55.1
Aa31LG8G15170 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.7e-79 300.4 331 55.0
Sc16g0002080 Simmondsia chinensis HOM05D001533 ORTHO05D005122 1.7e-79 300.4 345 53.6
Medtr8g076020 Medicago truncatula HOM05D001533 ORTHO05D005122 2.9e-79 299.7 340 55.6
BcaB08g34783 Brassica carinata HOM05D001533 ORTHO05D005122 3.6e-77 292.7 329 55.0
AL6G43540 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 6.8e-76 288.5 341 53.1
AL8G45270 Arabidopsis lyrata HOM05D001533 ORTHO05D005122 2.8e-74 283.1 346 51.7
A06p33470 Brassica napus HOM05D001533 ORTHO05D005122 6.3e-74 282.0 329 53.5
AT5G66250 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 9.1e-73 278.1 335 52.5
Aa31LG6G13050 Aethionema arabicum HOM05D001533 ORTHO05D005122 1.6e-72 277.3 343 47.8
BraA06t26280Z Brassica rapa HOM05D001533 ORTHO05D005122 4.5e-72 275.8 324 53.4
Sp2g30440 Schrenkiella parvula HOM05D001533 ORTHO05D005122 1.3e-71 274.2 288 58.3
BolC3t18147H Brassica oleracea HOM05D001533 ORTHO05D005122 1.7e-71 273.9 323 53.6
Oeu048459.1 Olea europaea HOM05D001533 ORTHO05D005122 2.2e-71 273.5 309 54.7
Ah.02g124450 Amaranthus hybridus HOM05D001533 ORTHO05D005122 1.9e-70 270.4 261 58.2
Carub.0008s2824 Capsella rubella HOM05D001533 ORTHO05D005122 2.7e-69 266.5 338 50.6
Thhalv10025665m.g Eutrema salsugineum HOM05D001533 ORTHO05D005122 2.7e-69 266.5 344 46.8
C03p58890 Brassica napus HOM05D001533 ORTHO05D005122 2.2e-66 256.9 323 51.7
C09p11970 Brassica napus HOM05D001533 ORTHO05D005122 1.1e-65 254.6 285 56.5
BcaNung04495 Brassica carinata HOM05D001533 ORTHO05D005122 4.5e-64 249.2 228 63.6
A09p10100 Brassica napus HOM05D001533 ORTHO05D005122 1.0e-63 248.1 284 55.6
BolC9t54085H Brassica oleracea HOM05D001533 ORTHO05D005122 5.0e-63 245.7 303 52.8
BraA09t36653Z Brassica rapa HOM05D001533 ORTHO05D005122 6.6e-63 245.4 296 53.0
Sp7g33880 Schrenkiella parvula HOM05D001533 ORTHO05D005122 1.6e-61 240.7 289 49.5
AagrBONN_evm.TU.Sc2ySwM_228.4945 Anthoceros agrestis HOM05D001533 ORTHO05D005122 3.6e-61 239.6 349 40.7
Lsat_1_v5_gn_4_146800 Lactuca sativa HOM05D001533 ORTHO05D005122 1.4e-60 237.7 339 47.5
ATR0680G362 Amborella trichopoda HOM05D001533 ORTHO05D005122 5.7e-59 232.3 340 43.2
Lsat_1_v5_gn_4_146821 Lactuca sativa HOM05D001533 ORTHO05D005122 9.8e-59 231.5 345 45.8
Carub.0007s0413 Capsella rubella HOM05D001533 ORTHO05D005122 5.9e-56 222.2 321 43.9
BolC7t40899H Brassica oleracea HOM05D001533 ORTHO05D005122 7.8e-56 221.9 285 49.8
SMO358G0186 Selaginella moellendorffii HOM05D001533 ORTHO05D005122 9.5e-54 214.9 294 45.9
MD15G1246600 Malus domestica HOM05D001533 ORTHO05D005122 1.2e-51 208.0 138 84.1
HanXRQChr16g0531321 Helianthus annuus HOM05D001533 ORTHO05D005122 3.4e-51 206.5 185 60.0
SEGI_32707 Sequoiadendron giganteum HOM05D001533 ORTHO05D005122 3.4e-51 206.5 345 37.7
BcaNung04499 Brassica carinata HOM05D001533 ORTHO05D005122 7.5e-43 178.7 266 44.0
CARHR281470 Cardamine hirsuta HOM05D001533 ORTHO05D005122 9.8e-43 178.3 263 44.1
unitig_899.g14709 Utricularia gibba HOM05D001533 ORTHO05D000063 1.9e-41 174.1 143 67.1
AT4G36105 Arabidopsis thaliana HOM05D001533 ORTHO05D005122 7.8e-40 168.7 297 43.1
AUR62043805 Chenopodium quinoa HOM05D001533 ORTHO05D005122 1.0e-39 168.3 172 62.8
HPP92_007128 Vanilla planifolia HOM05D001533 ORTHO05D005122 3.3e-38 163.3 229 46.7
C01p02930 Brassica napus HOM05D001533 ORTHO05D024397 1.7e-31 141.0 281 38.8
CARHR244500 Cardamine hirsuta HOM05D001533 ORTHO05D005122 1.9e-30 137.5 317 38.5
unitig_699.g19710 Utricularia gibba HOM05D001533 ORTHO05D005122 1.1e-25 121.7 145 54.5
BolC1t00279H Brassica oleracea HOM05D001533 ORTHO05D024397 2.1e-24 117.5 301 34.2
A01p02640 Brassica napus HOM05D001533 ORTHO05D024397 3.6e-21 106.7 284 33.8
BraA01t00250Z Brassica rapa HOM05D001533 ORTHO05D024397 3.6e-21 106.7 284 33.8
CARHR281460 Cardamine hirsuta HOM05D001533 ORTHO05D019802 1.0e-15 88.6 55 85.5
A09p11640 Brassica napus HOM05D001533 ORTHO05D019802 2.3e-15 87.4 104 59.6
arahy.Tifrunner.gnm1.ann1.2HD0B7 Arachis hypogaea HOM05D001533 ORTHO05D019802 6.6e-15 85.9 54 85.2
BraA09t36810Z Brassica rapa HOM05D001533 ORTHO05D019802 7.3e-14 82.4 104 54.8
BcaNung00764 Brassica carinata HOM05D001533 ORTHO05D024397 2.6e-11 73.9 301 29.9
BolC9t54258H Brassica oleracea HOM05D001533 ORTHO05D019802 1.0e-07 62.0 109 47.7
BcaC04g22938 Brassica carinata HOM05D001533 ORTHO05D019802 1.1e-06 58.5 102 45.1


User provided reference genes

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