Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G256200 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 9.6e-80 300.1 147 100.0
Phvul.003G256400 Phaseolus vulgaris HOM05D004674 ORTHO05D007261 1.4e-75 286.2 142 97.9
Glyma.02G053800 Glycine max HOM05D004674 ORTHO05D007261 9.0e-70 266.9 142 91.5
VMungo0251G2099 Vigna mungo HOM05D004674 ORTHO05D007261 9.0e-70 266.9 142 93.0
Medtr8g076950 Medicago truncatula HOM05D004674 ORTHO05D007261 2.1e-66 255.8 142 88.0
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 1.3e-65 253.1 142 86.6
Psat4g095640 Pisum sativum HOM05D004674 ORTHO05D007261 1.8e-65 252.7 142 86.6
arahy.Tifrunner.gnm1.ann1.LKR1Y0 Arachis hypogaea HOM05D004674 ORTHO05D007261 6.7e-65 250.8 142 86.6
TPR.G21548 Trifolium pratense HOM05D004674 ORTHO05D007261 1.9e-64 249.2 142 85.9
arahy.Tifrunner.gnm1.ann1.SG067W Arachis hypogaea HOM05D004674 ORTHO05D007261 5.7e-64 247.7 142 85.2
Lj4g0022194 Lotus japonicus HOM05D004674 ORTHO05D007261 7.4e-64 247.3 142 83.1
Lalb_Chr16g0391041 Lupinus albus HOM05D004674 ORTHO05D007261 7.4e-64 247.3 142 84.5
Eucgr.I02404 Eucalyptus grandis HOM05D004674 ORTHO05D007261 1.0e-60 236.9 142 79.6
TAR376G0038 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.0e-60 236.9 142 79.6
TAR376G0875 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.0e-60 236.9 142 79.6
Prupe.7G158600 Prunus persica HOM05D004674 ORTHO05D007261 5.0e-60 234.6 142 77.5
TAR376G0961 Trochodendron aralioides HOM05D004674 ORTHO05D007261 1.1e-59 233.4 142 79.6
Lj4A206G17 Lonicera japonica HOM05D004674 ORTHO05D007261 1.4e-59 233.0 142 80.3
Dinv40019 Davidia involucrata HOM05D004674 ORTHO05D007261 1.9e-59 232.6 141 81.6
Haze_03856 Corylus avellana HOM05D004674 ORTHO05D007261 5.5e-59 231.1 142 77.5
Cc07_g09910 Coffea canephora HOM05D004674 ORTHO05D007261 7.2e-59 230.7 142 74.6
CiPaw.07G049300 Carya illinoinensis HOM05D004674 ORTHO05D007261 1.6e-58 229.6 142 79.6
QL06p035418 Quercus lobata HOM05D004674 ORTHO05D007261 1.6e-58 229.6 142 77.5
CANSAT01G1299 Cannabis sativa HOM05D004674 ORTHO05D007261 2.7e-58 228.8 142 76.8
Ciclev10024970m.g Citrus clementina HOM05D004674 ORTHO05D007261 3.6e-58 228.4 142 78.9
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 6.1e-58 227.6 141 79.4
Gorai.007G201200 Gossypium raimondii HOM05D004674 ORTHO05D007261 7.9e-58 227.3 142 80.3
MD15G1256300 Malus domestica HOM05D004674 ORTHO05D007261 7.9e-58 227.3 142 76.1
Migut.H02523 Erythranthe guttata HOM05D004674 ORTHO05D007261 1.4e-57 226.5 142 76.1
SalBow8G5199 Salvia bowleyana HOM05D004674 ORTHO05D007261 1.4e-57 226.5 142 76.1
Thecc.01G030000 Theobroma cacao HOM05D004674 ORTHO05D007261 1.4e-57 226.5 142 78.2
QL06p035429 Quercus lobata HOM05D004674 ORTHO05D007261 1.8e-57 226.1 142 77.5
Oeu019445.1 Olea europaea HOM05D004674 ORTHO05D007261 5.1e-57 224.6 143 76.2
SalBow8G1271 Salvia bowleyana HOM05D004674 ORTHO05D007261 5.1e-57 224.6 142 75.4
Atru.chr3.699 Acer truncatum HOM05D004674 ORTHO05D007261 1.5e-56 223.0 142 76.8
Aqoxy5G01578 Aquilegia oxysepala HOM05D004674 ORTHO05D007261 1.5e-56 223.0 142 78.2
Gohir.A11G182300 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.5e-56 223.0 142 79.6
Nn5g29687 Nelumbo nucifera HOM05D004674 ORTHO05D007261 1.5e-56 223.0 142 74.6
TWI09G0580 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 1.5e-56 223.0 142 74.6
ClCG01G019830 Citrullus lanatus HOM05D004674 ORTHO05D007261 1.9e-56 222.6 141 75.2
FAN23G0750 Fragaria x ananassa HOM05D004674 ORTHO05D007261 1.9e-56 222.6 142 76.1
Cfa006896 Carpinus fangiana HOM05D004674 ORTHO05D007261 2.5e-56 222.2 142 75.4
FAN28G0143 Fragaria x ananassa HOM05D004674 ORTHO05D007261 2.5e-56 222.2 142 75.4
EL10As8g23909 Beta vulgaris HOM05D004674 ORTHO05D007261 3.3e-56 221.9 142 77.5
FAN26G2871 Fragaria x ananassa HOM05D004674 ORTHO05D007261 3.3e-56 221.9 142 76.1
Cpa.g.sc6.166 Carica papaya HOM05D004674 ORTHO05D007261 4.3e-56 221.5 141 73.8
RcHm_v2.0_Chr2g0100861 Rosa chinensis HOM05D004674 ORTHO05D007261 4.3e-56 221.5 142 77.5
Hund16446 Selenicereus undatus HOM05D004674 ORTHO05D007261 4.3e-56 221.5 142 75.4
Atru.chr3.652 Acer truncatum HOM05D004674 ORTHO05D007261 9.7e-56 220.3 142 76.1
CsaV3_6G046560 Cucumis sativus L. HOM05D004674 ORTHO05D007261 9.7e-56 220.3 141 75.9
Duzib264G1222 Durio zibethinus HOM05D004674 ORTHO05D007261 9.7e-56 220.3 142 76.8
Actinidia35628 Actinidia chinensis HOM05D004674 ORTHO05D007261 1.3e-55 219.9 142 73.9
Glyma.16G133933 Glycine max HOM05D004674 ORTHO05D007261 1.3e-55 219.9 121 89.3
SGA_v2.0_scaffold12G06320 Striga asiatica HOM05D004674 ORTHO05D007261 1.7e-55 219.5 142 72.5
Potri.007G021000 Populus trichocarpa HOM05D004674 ORTHO05D007261 2.8e-55 218.8 142 76.8
GSVIVG01018892001 Vitis vinifera HOM05D004674 ORTHO05D007261 2.8e-55 218.8 142 75.4
Sabra07G0018000 Salix brachista HOM05D004674 ORTHO05D007261 3.7e-55 218.4 142 76.1
CSS0017426 Camellia sinensis var. sinensis HOM05D004674 ORTHO05D007261 4.8e-55 218.0 141 75.2
Gohir.D11G189100 Gossypium hirsutum HOM05D004674 ORTHO05D007261 4.8e-55 218.0 150 75.3
AUR62004091 Chenopodium quinoa HOM05D004674 ORTHO05D007261 6.3e-55 217.6 142 73.2
Sc16g0002550 Simmondsia chinensis HOM05D004674 ORTHO05D007261 6.3e-55 217.6 142 73.9
AUR62007603 Chenopodium quinoa HOM05D004674 ORTHO05D007261 1.4e-54 216.5 142 73.9
COL.COLO4_22029 Corchorus olitorius HOM05D004674 ORTHO05D007261 1.8e-54 216.1 142 75.4
PGSC0003DMG400015491 Solanum tuberosum HOM05D004674 ORTHO05D007261 1.8e-54 216.1 142 74.6
MSTRG.2485 Avicennia marina HOM05D004674 ORTHO05D007261 2.4e-54 215.7 142 73.2
TWI09G0339 Tripterygium wilfordii HOM05D004674 ORTHO05D007261 3.1e-54 215.3 142 73.9
ATR0568G133 Amborella trichopoda HOM05D004674 ORTHO05D007261 4.1e-54 214.9 142 71.8
HanXRQChr09g0261191 Helianthus annuus HOM05D004674 ORTHO05D007261 4.1e-54 214.9 142 74.6
THA.LOC104821303 Tarenaya hassleriana HOM05D004674 ORTHO05D007261 4.1e-54 214.9 141 73.8
Solyc02g062560.3 Solanum lycopersicum HOM05D004674 ORTHO05D007261 5.3e-54 214.5 142 73.9
DCAR_017308 Daucus carota HOM05D004674 ORTHO05D007261 6.9e-54 214.2 142 71.1
ECA232G2544 Erigeron canadensis HOM05D004674 ORTHO05D000001 1.5e-53 213.0 142 72.5
Lsat_1_v5_gn_4_148020 Lactuca sativa HOM05D004674 ORTHO05D007261 1.5e-53 213.0 142 73.9
Rhsim08G0121400 Rhododendron simsii HOM05D004674 ORTHO05D007261 1.5e-53 213.0 141 74.5
Zm00001eb225760 Zea mays HOM05D004674 ORTHO05D007261 2.0e-53 212.6 142 71.8
Sopen02g013570 Solanum pennellii HOM05D004674 ORTHO05D007261 2.6e-53 212.2 142 73.9
PGR119G1113 Punica granatum HOM05D004674 ORTHO05D007261 3.4e-53 211.8 142 72.5
Sed0001139 Sechium edule HOM05D004674 ORTHO05D007261 1.0e-52 210.3 141 71.6
HPP92_004908 Vanilla planifolia HOM05D004674 ORTHO05D007261 1.0e-52 210.3 142 71.8
Carub.0008s2809 Capsella rubella HOM05D004674 ORTHO05D007261 1.3e-52 209.9 141 73.8
BcaB02g10033 Brassica carinata HOM05D004674 ORTHO05D007261 2.9e-52 208.8 141 73.0
Peaxi162Scf00008g03325 Petunia axillaris HOM05D004674 ORTHO05D007261 5.0e-52 208.0 142 71.8
Thhalv10003695m.g Eutrema salsugineum HOM05D004674 ORTHO05D007261 6.5e-52 207.6 141 72.3
CAN.G1019.6 Capsicum annuum HOM05D004674 ORTHO05D007261 8.5e-52 207.2 142 73.2
Potri.005G120100 Populus trichocarpa HOM05D004674 ORTHO05D007261 8.5e-52 207.2 143 71.3
AL8G45110 Arabidopsis lyrata HOM05D004674 ORTHO05D007261 1.1e-51 206.8 140 72.9
AT5G66420 Arabidopsis thaliana HOM05D004674 ORTHO05D007261 1.1e-51 206.8 141 71.6
A07p17540 Brassica napus HOM05D004674 ORTHO05D007261 2.5e-51 205.7 141 72.3
BraA07t29474Z Brassica rapa HOM05D004674 ORTHO05D007261 2.5e-51 205.7 141 72.3
CARHR034750 Cardamine hirsuta HOM05D004674 ORTHO05D007261 2.5e-51 205.7 141 71.6
Nitab4.5_0000136g0250 Nicotiana tabacum HOM05D004674 ORTHO05D007261 2.5e-51 205.7 142 71.8
Aa31LG1G14940 Aethionema arabicum HOM05D004674 ORTHO05D007261 7.2e-51 204.1 141 70.9
BolC7t43070H Brassica oleracea HOM05D004674 ORTHO05D007261 2.7e-50 202.2 142 71.8
C07p25500 Brassica napus HOM05D004674 ORTHO05D007261 3.6e-50 201.8 142 71.8
Nitab4.5_0001525g0030 Nicotiana tabacum HOM05D004674 ORTHO05D007261 3.6e-50 201.8 142 71.8
BcaC06g34697 Brassica carinata HOM05D004674 ORTHO05D007261 1.0e-49 200.3 142 71.1
PSO170G5809 Papaver somniferum HOM05D004674 ORTHO05D007261 1.0e-49 200.3 142 66.2
Sp2g30300 Schrenkiella parvula HOM05D004674 ORTHO05D007261 3.0e-49 198.7 141 68.8
SEGI_40838 Sequoiadendron giganteum HOM05D004674 ORTHO05D007261 2.6e-48 195.7 142 65.5
Os06g0472400 Oryza sativa ssp. japonica HOM05D004674 ORTHO05D007261 3.3e-48 195.3 142 66.9
unitig_60.g25534 Utricularia gibba HOM05D004674 ORTHO05D007261 2.2e-47 192.6 142 64.1
FvH4_1g12760 Fragaria vesca HOM05D004674 ORTHO05D007261 2.8e-47 192.2 124 75.0
Gohir.D11G189150 Gossypium hirsutum HOM05D004674 ORTHO05D007261 2.4e-46 189.1 153 65.4
Gorai.007G201400 Gossypium raimondii HOM05D004674 ORTHO05D007261 2.4e-46 189.1 153 65.4
PSO407G0425 Papaver somniferum HOM05D004674 ORTHO05D007261 1.3e-44 183.3 142 61.3
Gohir.A11G182500 Gossypium hirsutum HOM05D004674 ORTHO05D007261 1.2e-42 176.8 144 62.5
Actinidia19204 Actinidia chinensis HOM05D004674 ORTHO05D007261 3.6e-42 175.3 124 67.7
PSO170G6195 Papaver somniferum HOM05D004674 ORTHO05D007261 1.0e-41 173.7 142 59.9
Ca_06503_v3 Cicer arietinum L. HOM05D000059 ORTHO05D000128 5.2e-41 171.4 94 89.4
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 6.7e-41 171.0 142 62.7
Pp3c20_8030 Physcomitrium patens HOM05D004674 ORTHO05D007261 6.7e-41 171.0 141 57.4
SMO367G0601 Selaginella moellendorffii HOM05D004674 ORTHO05D007261 6.3e-39 164.5 142 56.3
QL03p066021 Quercus lobata HOM05D004674 ORTHO05D029177 1.1e-38 163.7 101 76.2
Ca_07052_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 2.4e-38 162.5 91 85.7
TAR376G0765 Trochodendron aralioides HOM05D004674 ORTHO05D007261 7.0e-38 161.0 142 60.6
AagrBONN_evm.TU.Sc2ySwM_344.2833 Anthoceros agrestis HOM05D004674 ORTHO05D007261 1.2e-37 160.2 142 54.9
MELO3C010392.2 Cucumis melo HOM05D004674 ORTHO05D007261 1.2e-37 160.2 141 59.6
Ca_22377_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 7.7e-37 157.5 88 85.2
Lj4C205T11 Lonicera japonica HOM05D004674 ORTHO05D007261 3.0e-33 145.6 152 56.6
Duzib147G1548 Durio zibethinus HOM05D004674 ORTHO05D007261 6.7e-33 144.4 88 77.3
Manes.02G097100 Manihot esculenta HOM05D004674 ORTHO05D007261 9.7e-32 140.6 92 72.8
arahy.Tifrunner.gnm1.ann1.TV0A1X Arachis hypogaea HOM05D004674 ORTHO05D007261 4.0e-25 118.6 91 64.8
MELO3C028475.2 Cucumis melo HOM05D004674 ORTHO05D029177 1.6e-21 106.7 61 82.0
SGA_v2.0_scaffold48G18033 Striga asiatica HOM05D004674 ORTHO05D051422 7.5e-16 87.8 125 38.4
Gohir.A06G159466 Gossypium hirsutum HOM05D004674 ORTHO05D029177 5.4e-14 81.6 52 76.9
Gorai.010G192800 Gossypium raimondii HOM05D004674 ORTHO05D029177 1.0e-12 77.4 52 73.1
SEGI_19277 Sequoiadendron giganteum HOM05D004674 ORTHO05D020551 1.8e-09 66.6 75 48.0
Dinv40102 Davidia involucrata HOM05D004674 ORTHO05D020551 2.4e-06 56.2 60 48.3


User provided reference genes

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