Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 0.0e+00 1575.1 1046 100.0
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 0.0e+00 1463.7 1046 94.5
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1415.2 1041 92.6
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1379.0 1040 90.9
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 0.0e+00 1204.1 1039 82.4
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 0.0e+00 1204.1 1039 82.4
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 0.0e+00 1198.3 1043 82.6
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1194.9 1037 81.7
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 0.0e+00 1189.1 1045 81.2
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 0.0e+00 1184.9 1050 81.8
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 0.0e+00 1157.9 1045 80.7
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 0.0e+00 1151.3 1039 81.4
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 0.0e+00 1147.9 1040 80.3
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1125.2 1050 79.1
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1120.9 1050 78.9
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 0.0e+00 1106.7 1037 78.5
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 2.0e-304 1049.3 1042 75.7
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 8.4e-303 1043.9 1058 74.4
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 4.0e-297 1025.0 1042 74.9
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 4.4e-296 1021.5 1042 75.0
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.0e-292 1010.4 1109 71.0
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 2.8e-290 1002.3 1104 70.4
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 1.1e-289 1000.3 1081 71.8
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 9.0e-289 997.3 904 83.1
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 3.4e-288 995.3 1054 73.1
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 3.4e-288 995.3 1045 73.3
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 2.9e-287 992.3 1101 70.2
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 6.4e-287 991.1 1110 70.5
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 8.4e-287 990.7 1053 72.9
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 8.4e-287 990.7 1093 71.1
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.4e-286 989.9 1043 73.8
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 2.4e-286 989.2 1100 70.6
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 5.4e-286 988.0 1044 73.5
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 1.6e-285 986.5 1057 72.4
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.1e-285 986.1 1108 70.0
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.0e-284 983.8 1094 70.6
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 1.1e-283 980.3 1111 69.7
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 1.9e-283 979.5 1050 72.4
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.3e-283 978.8 1069 71.8
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 4.3e-283 978.4 1081 71.5
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 7.4e-283 977.6 1043 72.9
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.8e-281 973.0 1041 72.8
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 5.3e-281 971.5 1107 69.2
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 1.2e-280 970.3 1107 69.4
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 1.5e-280 969.9 1130 68.6
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 2.0e-280 969.5 1041 73.0
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 1.3e-279 966.8 1043 61.4
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 2.9e-279 965.7 1050 71.8
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 6.7e-276 954.5 1103 68.4
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 6.2e-274 948.0 1045 71.7
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 5.3e-273 944.9 1107 68.8
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 9.0e-273 944.1 1043 72.2
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 2.0e-272 943.0 1082 69.3
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.4e-272 942.2 1082 69.2
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 7.2e-270 934.5 1039 71.1
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 4.6e-269 931.8 1082 67.7
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-267 927.2 1072 69.3
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 1.1e-265 920.6 1049 69.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-265 920.6 1072 69.2
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 1.1e-265 920.6 1039 71.0
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 1.2e-264 917.1 1063 69.3
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 9.4e-262 907.5 1043 70.5
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 5.1e-260 901.7 1055 66.4
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 5.1e-260 901.7 1048 69.7
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 8.8e-260 901.0 1042 69.6
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 8.8e-260 901.0 1044 68.8
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 9.7e-259 897.5 1061 64.2
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 1.7e-258 896.7 1092 64.9
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 2.2e-258 896.3 1078 66.0
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 1.8e-257 893.3 1059 65.9
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 2.4e-257 892.9 1077 66.0
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 5.9e-256 888.3 1082 67.1
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 8.5e-255 884.4 1064 65.4
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 5.5e-254 881.7 1058 62.7
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 4.7e-253 878.6 1033 68.7
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 1.8e-252 876.7 1050 68.0
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 5.1e-252 875.2 1058 67.6
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 2.6e-251 872.8 1053 69.0
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 8.2e-250 867.8 1078 64.6
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 2.4e-249 866.3 1209 44.9
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 3.5e-248 862.4 1050 67.0
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 8.5e-247 857.8 1141 45.0
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 9.4e-246 854.4 1068 64.1
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 3.0e-244 849.4 1042 66.9
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 2.6e-243 846.3 1048 68.9
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 1.7e-242 843.6 1036 66.7
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-240 837.4 1035 66.1
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 2.7e-240 836.3 1046 67.4
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 3.5e-240 835.9 493 82.2
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 8.5e-239 831.2 1063 63.7
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.7e-231 807.0 486 80.2
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 5.7e-227 792.0 493 76.7
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 2.9e-223 779.6 492 76.6
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 2.9e-223 779.6 918 73.0
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 4.0e-220 769.2 980 63.0
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 1.2e-216 757.7 1050 58.8
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.0e-215 752.3 824 65.0
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 1.9e-214 750.4 1036 55.4
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 1.9e-201 707.2 488 69.3
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 6.4e-194 682.2 1038 60.6
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 5.4e-193 679.1 783 79.3
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 8.4e-178 628.6 925 63.8
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 5.4e-177 625.9 480 63.5
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.6e-173 614.4 973 56.6
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 3.7e-157 560.1 837 67.7
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 8.8e-143 512.3 1025 45.6
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 4.7e-136 490.0 1037 47.2
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 4.8e-133 479.9 438 57.5
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 5.7e-126 456.4 254 86.2
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.2e-96 359.0 539 38.4
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 8.9e-95 352.8 870 36.2
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 1.9e-92 345.1 205 77.6
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 1.6e-91 342.0 707 56.6
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 8.1e-88 329.7 203 77.8
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 1.2e-83 315.8 331 54.4
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 1.1e-79 302.8 341 51.0
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 4.7e-72 277.3 453 38.2
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.1e-65 256.1 173 72.8
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 1.1e-65 256.1 335 48.4
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 3.6e-64 251.1 868 30.9
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 5.3e-63 247.3 269 54.6
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.5e-62 245.7 196 69.4
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.3e-56 226.1 294 48.0
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 5.3e-47 194.1 133 66.2
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 3.8e-45 188.0 122 73.8
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 6.0e-43 180.6 99 79.8
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 5.1e-42 177.6 183 53.6
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 2.6e-38 165.2 129 61.2
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 4.5e-38 164.5 129 61.2
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.8e-37 161.4 92 85.9
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 3.9e-34 151.4 108 69.4
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 9.7e-33 146.7 88 79.5
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.4e-31 142.9 112 69.6
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.1e-31 141.4 75 82.7
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 1.2e-27 129.8 92 66.3
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 7.4e-25 120.6 105 61.9
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 7.4e-25 120.6 73 72.6
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 2.3e-18 99.0 129 42.6
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 1.6e-14 86.3 119 42.9
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 2.2e-13 82.4 115 40.9
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.9e-12 79.3 45 84.4
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 2.8e-08 65.5 50 52.0
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 5.3e-07 61.2 40 70.0
ATR0030G038 Amborella trichopoda HOM05D047453 ORTHO05D006199 7.0e-07 60.8 219 28.8
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.6e-06 59.7 83 45.8


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