Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 7.5e-42 174.9 235 100.0
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 7.0e-32 141.7 102 74.5
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 1.2e-31 141.0 104 80.8
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.0e-30 137.9 96 82.3
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 1.6e-28 130.6 104 81.7
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 4.7e-28 129.0 96 69.8
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 6.1e-28 128.6 100 78.0
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.3e-27 126.7 100 69.0
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 2.3e-27 126.7 104 67.3
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 4.0e-27 125.9 100 80.0
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 5.2e-27 125.6 100 68.0
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 6.8e-27 125.2 101 72.3
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 2.0e-26 123.6 104 65.4
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 2.6e-26 123.2 104 65.4
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 3.4e-26 122.9 96 79.2
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 9.8e-26 121.3 104 65.4
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 1.7e-25 120.6 99 67.7
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 2.2e-25 120.2 98 71.4
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 2.8e-25 119.8 93 69.9
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 2.8e-25 119.8 93 68.8
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 3.7e-25 119.4 113 59.3
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 3.7e-25 119.4 94 88.3
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 6.3e-25 118.6 102 63.7
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 1.1e-24 117.9 107 66.4
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.8e-24 117.1 107 61.7
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 2.4e-24 116.7 110 59.1
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 3.1e-24 116.3 113 59.3
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 3.1e-24 116.3 95 80.0
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 3.1e-24 116.3 104 61.5
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 4.1e-24 115.9 95 67.4
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 5.4e-24 115.5 102 64.7
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 7.0e-24 115.2 105 61.9
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 9.2e-24 114.8 103 62.1
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 9.2e-24 114.8 107 60.7
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 9.2e-24 114.8 99 62.6
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 1.2e-23 114.4 58 94.8
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 1.2e-23 114.4 58 94.8
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 1.2e-23 114.4 101 66.3
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.6e-23 114.0 101 71.3
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 2.0e-23 113.6 108 59.3
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 2.0e-23 113.6 102 62.7
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 2.7e-23 113.2 58 94.8
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 2.7e-23 113.2 94 85.1
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 3.5e-23 112.8 105 59.0
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 3.5e-23 112.8 104 68.3
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 4.5e-23 112.5 102 61.8
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 4.5e-23 112.5 104 61.5
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 4.5e-23 112.5 58 93.1
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 5.9e-23 112.1 102 60.8
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 1.0e-22 111.3 100 71.0
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 1.3e-22 110.9 99 67.7
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 1.3e-22 110.9 93 77.4
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 1.3e-22 110.9 110 59.1
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 1.7e-22 110.5 91 64.8
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 2.3e-22 110.2 94 64.9
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 2.3e-22 110.2 100 60.0
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 2.3e-22 110.2 95 80.0
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 2.9e-22 109.8 104 72.1
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 3.8e-22 109.4 58 93.1
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 3.8e-22 109.4 114 57.0
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 5.0e-22 109.0 58 91.4
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 5.0e-22 109.0 58 91.4
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 5.0e-22 109.0 58 91.4
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 5.0e-22 109.0 58 91.4
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 5.0e-22 109.0 58 89.7
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 6.6e-22 108.6 58 91.4
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 6.6e-22 108.6 58 91.4
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 6.6e-22 108.6 58 91.4
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 8.6e-22 108.2 115 60.0
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 1.5e-21 107.5 92 67.4
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 3.3e-21 106.3 103 69.9
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 3.3e-21 106.3 58 91.4
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 4.3e-21 105.9 100 60.0
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 9.5e-21 104.8 58 89.7
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 2.1e-20 103.6 55 90.9
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 2.1e-20 103.6 58 86.2
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 3.6e-20 102.8 58 87.9
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 4.7e-20 102.4 53 92.5
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 4.7e-20 102.4 94 57.4
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 6.1e-20 102.1 86 65.1
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 6.1e-20 102.1 58 86.2
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.0e-19 101.3 58 84.5
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 1.4e-19 100.9 58 87.9
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 2.3e-19 100.1 58 84.5
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 6.8e-19 98.6 58 82.8
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 8.9e-19 98.2 86 62.8
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 8.9e-19 98.2 86 62.8
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 1.5e-18 97.4 58 81.0
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 1.5e-18 97.4 97 56.7
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 1.8e-16 90.5 58 75.9
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 5.4e-16 89.0 90 55.6
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 4.6e-15 85.9 57 75.4
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 1.7e-14 84.0 57 73.7
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 2.3e-14 83.6 57 71.9
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 1.1e-08 64.7 58 55.2


User provided reference genes

Program Settings