Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 8.2e-177 623.6 316 100.0
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 5.7e-146 521.2 316 84.2
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 5.3e-144 514.6 317 85.2
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 5.0e-142 508.1 316 82.0
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 3.5e-135 485.3 291 87.3
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 5.0e-134 481.5 316 78.5
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 2.0e-119 433.0 316 73.1
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 3.5e-119 432.2 317 73.5
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 1.9e-117 426.4 316 71.5
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 3.4e-114 415.6 313 70.6
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 5.8e-114 414.8 316 68.7
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 3.6e-100 369.0 317 66.6
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 2.3e-99 366.3 320 61.9
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 6.4e-97 358.2 325 60.3
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 8.3e-97 357.8 329 61.1
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 5.4e-96 355.1 324 61.1
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 2.1e-95 353.2 320 60.9
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 2.1e-95 353.2 324 60.8
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 1.1e-93 347.4 323 58.8
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 7.3e-93 344.7 323 58.5
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 2.8e-92 342.8 332 56.0
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 2.4e-91 339.7 324 59.0
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 1.2e-90 337.4 319 57.7
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 2.0e-90 336.7 318 57.9
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 2.0e-90 336.7 325 58.5
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 3.4e-90 335.9 324 57.4
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 3.4e-90 335.9 334 56.9
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 4.4e-90 335.5 319 58.6
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 5.8e-90 335.1 331 57.4
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 9.9e-90 334.3 324 57.1
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 2.9e-89 332.8 319 58.9
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 3.8e-89 332.4 332 56.9
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 1.4e-88 330.5 330 55.8
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 5.4e-88 328.6 326 54.0
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 1.2e-87 327.4 318 58.2
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 3.5e-87 325.9 324 56.2
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 6.0e-87 325.1 323 58.5
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 1.3e-86 323.9 321 56.1
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 3.0e-86 322.8 327 55.0
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 8.7e-86 321.2 329 55.0
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 2.5e-85 319.7 319 56.1
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 5.6e-85 318.5 326 53.7
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 9.6e-85 317.8 323 56.7
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 9.6e-85 317.8 326 56.1
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 1.6e-84 317.0 332 55.4
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 1.1e-83 314.3 316 56.6
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.1e-83 314.3 320 57.2
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 1.4e-83 313.9 316 55.1
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 1.4e-83 313.9 323 55.1
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 2.4e-83 313.2 320 57.2
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.4e-83 313.2 320 57.2
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 6.9e-83 311.6 326 54.0
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 1.5e-82 310.5 321 53.9
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 2.0e-82 310.1 326 54.6
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 7.6e-82 308.1 320 57.2
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.7e-81 307.0 332 56.0
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 1.7e-81 307.0 324 54.0
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 2.2e-81 306.6 310 56.5
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 2.9e-81 306.2 325 52.6
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 2.9e-81 306.2 332 56.0
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 8.4e-81 304.7 319 52.7
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 1.4e-80 303.9 332 52.7
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 1.4e-80 303.9 332 52.7
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 2.4e-80 303.1 332 53.9
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 2.4e-80 303.1 324 53.1
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 1.2e-79 300.8 331 51.7
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 1.6e-79 300.4 318 53.1
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 2.7e-79 299.7 322 54.3
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 2.3e-78 296.6 316 53.8
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 2.3e-78 296.6 322 55.3
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 5.1e-78 295.4 335 52.2
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 2.5e-77 293.1 318 53.1
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 9.6e-77 291.2 315 52.4
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 2.8e-76 289.7 371 49.3
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 6.2e-76 288.5 325 53.5
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 2.4e-75 286.6 324 54.0
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 5.3e-75 285.4 316 53.5
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 9.0e-75 284.6 316 51.9
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 2.6e-74 283.1 328 49.7
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 5.8e-74 282.0 328 51.8
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 5.8e-74 282.0 323 51.1
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 9.9e-74 281.2 323 48.9
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 1.1e-72 277.7 333 52.0
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 2.4e-72 276.6 318 51.6
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 3.2e-72 276.2 337 48.7
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 4.2e-72 275.8 316 50.6
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 1.2e-71 274.2 316 49.7
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 4.6e-71 272.3 321 51.4
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 7.9e-71 271.6 320 50.9
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 7.9e-71 271.6 320 50.9
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 5.1e-70 268.9 315 49.5
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 1.1e-69 267.7 343 49.9
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 9.6e-69 264.6 330 50.0
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 2.1e-68 263.5 329 48.3
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 4.8e-68 262.3 314 48.4
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 4.0e-67 259.2 324 50.9
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 1.6e-63 247.3 405 42.0
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 2.5e-61 240.0 155 71.6
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 3.3e-61 239.6 168 67.3
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 1.0e-57 228.0 334 44.6
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 1.7e-57 227.3 317 42.6
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.4e-56 224.2 334 44.0
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 7.9e-55 218.4 326 42.6
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 3.7e-44 183.0 215 45.1
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 4.1e-43 179.5 128 65.6
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 1.3e-41 174.5 317 36.9
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 1.7e-41 174.1 318 35.8
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 1.0e-38 164.9 320 37.5
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 1.8e-38 164.1 162 53.1
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 1.4e-35 154.5 328 35.4
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 3.2e-32 143.3 325 33.2
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 1.6e-31 141.0 204 40.7
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 5.7e-29 132.5 271 38.7
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 7.4e-29 132.1 350 31.4
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 7.0e-27 125.6 137 45.3
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 3.5e-26 123.2 138 44.9
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 7.7e-26 122.1 128 45.3
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 4.7e-23 112.8 231 37.2
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 8.0e-23 112.1 136 49.3
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 2.3e-22 110.5 231 37.2
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 1.3e-20 104.8 166 41.0
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 5.4e-19 99.4 57 68.4
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 5.9e-18 95.9 57 64.9
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 4.2e-08 63.2 40 72.5
GSVIVG01008148001 Vitis vinifera HOM05D006355 ORTHO05D000948 1.0e-06 58.5 99 36.4
Actinidia25232 Actinidia chinensis HOM05D006355 ORTHO05D008284 2.3e-06 57.4 110 39.1


User provided reference genes

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