Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 7.8e-114 413.7 192 100.0
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 5.1e-105 384.4 192 92.2
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 2.5e-96 355.5 196 85.2
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 3.4e-93 345.1 192 83.9
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 2.1e-87 325.9 192 79.7
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 1.1e-86 323.6 192 78.1
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 1.8e-86 322.8 192 78.1
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 1.2e-85 320.1 191 77.5
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 7.1e-83 310.8 192 76.0
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.8e-78 296.2 190 71.1
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 5.3e-78 294.7 186 73.7
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 4.5e-77 291.6 186 72.6
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 9.9e-77 290.4 190 70.0
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.3e-76 290.0 190 71.6
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 2.9e-76 288.9 190 70.5
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 2.9e-76 288.9 191 72.3
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 3.8e-76 288.5 189 70.4
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 4.9e-76 288.1 190 70.0
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 4.9e-76 288.1 190 70.0
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 6.4e-76 287.7 190 71.1
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 1.1e-75 287.0 190 71.1
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 1.1e-75 287.0 190 71.1
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.4e-75 285.8 191 70.2
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 3.2e-75 285.4 191 70.2
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 5.5e-75 284.6 188 69.1
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 7.1e-75 284.3 186 71.0
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 7.1e-75 284.3 190 72.1
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.6e-74 283.1 189 68.3
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 2.7e-74 282.3 189 68.8
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 3.5e-74 282.0 185 70.3
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 3.5e-74 282.0 189 66.7
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 3.5e-74 282.0 188 70.7
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 4.6e-74 281.6 189 67.2
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 4.6e-74 281.6 190 71.1
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 6.0e-74 281.2 189 68.8
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 1.3e-73 280.0 189 70.9
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 1.8e-73 279.6 186 69.4
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.8e-73 279.6 190 68.9
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.3e-73 279.3 190 67.9
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 3.0e-73 278.9 192 65.1
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 3.9e-73 278.5 190 67.9
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 3.9e-73 278.5 190 69.5
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 3.9e-73 278.5 190 67.9
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 3.9e-73 278.5 194 67.5
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 3.9e-73 278.5 188 68.6
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 5.1e-73 278.1 205 65.4
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.1e-73 278.1 189 68.3
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 5.1e-73 278.1 189 68.3
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 1.1e-72 276.9 189 67.2
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.9e-72 276.2 189 68.8
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 2.5e-72 275.8 190 67.4
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 4.3e-72 275.0 192 64.1
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 1.3e-71 273.5 191 66.5
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 2.1e-71 272.7 189 70.9
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 2.8e-71 272.3 192 68.2
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 2.8e-71 272.3 190 66.3
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 2.8e-71 272.3 186 65.6
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 4.8e-71 271.6 189 70.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 6.2e-71 271.2 189 69.8
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 8.2e-71 270.8 189 67.2
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 1.1e-70 270.4 190 70.5
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 2.4e-70 269.2 192 68.2
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 3.1e-70 268.9 189 68.8
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 3.1e-70 268.9 189 68.8
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.0e-70 268.5 189 66.1
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 5.3e-70 268.1 193 66.8
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 5.3e-70 268.1 189 66.1
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 5.3e-70 268.1 189 65.6
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 6.9e-70 267.7 190 64.7
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 9.0e-70 267.3 188 69.1
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 9.0e-70 267.3 189 66.1
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 9.0e-70 267.3 189 66.1
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 1.2e-69 266.9 189 68.3
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 1.2e-69 266.9 189 68.3
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.5e-69 266.5 189 68.3
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 2.0e-69 266.2 189 65.1
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 2.6e-69 265.8 183 64.5
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 3.4e-69 265.4 189 67.7
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 3.4e-69 265.4 189 67.7
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 4.5e-69 265.0 192 64.6
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 4.5e-69 265.0 193 65.8
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 7.6e-69 264.2 190 66.8
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.3e-68 263.5 193 63.2
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.7e-68 263.1 194 63.9
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.7e-68 263.1 189 66.7
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 2.2e-68 262.7 221 60.6
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 8.4e-68 260.8 190 64.2
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 8.4e-68 260.8 190 64.7
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 1.4e-67 260.0 187 64.2
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 1.4e-67 260.0 184 65.8
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.9e-67 259.6 189 66.7
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 9.3e-67 257.3 188 62.8
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 1.6e-66 256.5 189 62.4
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 1.9e-64 249.6 192 65.1
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.5e-64 249.2 186 59.7
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 2.5e-64 249.2 188 62.2
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 9.7e-64 247.3 191 62.8
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.6e-63 246.5 186 60.8
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 4.8e-63 245.0 192 63.0
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 1.1e-62 243.8 189 59.3
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.8e-62 243.0 186 60.2
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 9.0e-62 240.7 184 64.1
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 1.2e-61 240.4 188 61.2
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 5.9e-61 238.0 186 61.3
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 7.6e-61 237.7 186 62.4
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 3.8e-60 235.3 232 52.2
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 5.0e-60 235.0 186 59.7
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 6.5e-60 234.6 188 57.4
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 9.4e-59 230.7 146 71.9
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 8.8e-57 224.2 185 59.5
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.9e-56 223.0 180 61.1
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.7e-56 221.5 189 58.7
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 5.7e-56 221.5 189 58.7
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 2.2e-55 219.5 148 67.6
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 9.1e-54 214.2 185 54.6
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 5.9e-53 211.5 184 54.3
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 1.7e-52 209.9 185 51.9
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 6.5e-52 208.0 186 51.6
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 7.9e-50 201.1 133 67.7
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 9.7e-32 141.0 84 72.6
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 2.4e-30 136.3 114 59.6
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 2.7e-29 132.9 109 56.9
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.3e-28 130.6 79 75.9
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.5e-24 117.1 101 57.4
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.3e-17 93.2 115 42.6
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 1.2e-16 90.9 94 48.9
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 2.5e-11 73.2 78 50.0


User provided reference genes

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