Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G097000 Phaseolus vulgaris HOM05D000641 ORTHO05D007351 6.4e-67 257.3 131 100.0
Glyma.15G124000 Glycine max HOM05D000641 ORTHO05D007351 9.6e-31 137.1 146 57.5
Glyma.09G018100 Glycine max HOM05D000641 ORTHO05D007351 2.6e-28 129.0 146 55.5
VMungo0540G1063 Vigna mungo HOM05D000641 ORTHO05D007351 9.9e-28 127.1 139 56.1
arahy.Tifrunner.gnm1.ann1.IFG75D Arachis hypogaea HOM05D000641 ORTHO05D007351 1.7e-27 126.3 146 51.4
arahy.Tifrunner.gnm1.ann1.J86N0J Arachis hypogaea HOM05D000641 ORTHO05D007351 1.7e-27 126.3 146 51.4
Lj6g0021862 Lotus japonicus HOM05D000641 ORTHO05D007351 9.3e-26 120.6 146 50.7
Ca_00787_v3 Cicer arietinum L. HOM05D000641 ORTHO05D007351 1.2e-25 120.2 144 50.0
Ca_11372_v3 Cicer arietinum L. HOM05D000641 ORTHO05D007351 1.2e-25 120.2 144 50.0
TPR.G10485 Trifolium pratense HOM05D000641 ORTHO05D007351 6.0e-25 117.9 145 49.7
Medtr2g028220 Medicago truncatula HOM05D000641 ORTHO05D007351 3.0e-24 115.5 145 49.0
Psat1g170840 Pisum sativum HOM05D000641 ORTHO05D007351 8.7e-24 114.0 145 50.3
Lalb_Chr15g0088501 Lupinus albus HOM05D000641 ORTHO05D007351 7.4e-23 110.9 146 45.2
QL05p066137 Quercus lobata HOM05D000641 ORTHO05D007351 2.4e-21 105.9 143 45.5
Lalb_Chr20g0119771 Lupinus albus HOM05D000641 ORTHO05D007351 3.1e-21 105.5 145 44.8
FAN21G1917 Fragaria x ananassa HOM05D000641 ORTHO05D007351 5.3e-21 104.8 146 45.2
RcHm_v2.0_Chr5g0000021 Rosa chinensis HOM05D000641 ORTHO05D007351 1.2e-20 103.6 146 43.2
Atru.chr1.2252 Acer truncatum HOM05D000641 ORTHO05D007351 1.3e-19 100.1 146 43.2
CiPaw.10G085300 Carya illinoinensis HOM05D000641 ORTHO05D007351 1.3e-19 100.1 141 46.1
Manes.10G068200 Manihot esculenta HOM05D000641 ORTHO05D007351 1.3e-19 100.1 153 41.8
FvH4_3g00020 Fragaria vesca HOM05D000641 ORTHO05D007351 1.7e-19 99.8 146 43.8
Peaxi162Scf00647g00043 Petunia axillaris HOM05D000641 ORTHO05D007351 8.4e-19 97.4 142 45.1
MSTRG.13094 Avicennia marina HOM05D000641 ORTHO05D007351 1.4e-18 96.7 141 44.0
Potri.016G000300 Populus trichocarpa HOM05D000641 ORTHO05D007351 1.9e-18 96.3 144 43.1
Actinidia02270 Actinidia chinensis HOM05D000641 ORTHO05D007351 3.2e-18 95.5 139 45.3
Oeu025984.1 Olea europaea HOM05D000641 ORTHO05D007351 3.2e-18 95.5 144 40.3
Oeu031376.1 Olea europaea HOM05D000040 ORTHO05D007351 4.2e-18 95.1 144 43.1
Dinv04374 Davidia involucrata HOM05D000641 ORTHO05D007351 5.5e-18 94.7 144 39.6
MD10G1342500 Malus domestica HOM05D000641 ORTHO05D007351 5.5e-18 94.7 143 41.3
AUR62016006 Chenopodium quinoa HOM05D000641 ORTHO05D007351 7.1e-18 94.4 145 42.1
Ciclev10014837m.g Citrus clementina HOM05D000641 ORTHO05D007351 1.2e-17 93.6 144 42.4
Oeu031373.1 Olea europaea HOM05D000641 ORTHO05D007351 1.2e-17 93.6 144 42.4
Prupe.4G000100 Prunus persica HOM05D000641 ORTHO05D007351 1.2e-17 93.6 144 41.0
AUR62021213 Chenopodium quinoa HOM05D000641 ORTHO05D007351 1.6e-17 93.2 145 41.4
FAN25G1388 Fragaria x ananassa HOM05D000641 ORTHO05D007351 1.6e-17 93.2 160 40.6
Ah.07g207340 Amaranthus hybridus HOM05D000641 ORTHO05D007351 2.1e-17 92.8 145 40.7
Potri.006G000400 Populus trichocarpa HOM05D000641 ORTHO05D007351 2.1e-17 92.8 144 41.7
Rhsim13G0137700 Rhododendron simsii HOM05D000641 ORTHO05D007351 2.7e-17 92.4 153 40.5
Sabra16G0008000 Salix brachista HOM05D000641 ORTHO05D007351 2.7e-17 92.4 144 42.4
SGA_v2.0_scaffold239G43988 Striga asiatica HOM05D000641 ORTHO05D007351 2.7e-17 92.4 142 40.8
COL.COLO4_31969 Corchorus olitorius HOM05D007436 ORTHO05D009398 4.6e-17 91.7 146 41.1
Gohir.A12G266850 Gossypium hirsutum HOM05D000641 ORTHO05D007351 1.3e-16 90.1 143 42.0
vmacro03582 Vaccinium macrocarpon HOM05D000641 ORTHO05D007351 1.3e-16 90.1 139 40.3
EL10Ac3g05668 Beta vulgaris HOM05D000641 ORTHO05D007351 2.3e-16 89.4 144 38.9
CSS0037478 Camellia sinensis var. sinensis HOM05D000641 ORTHO05D007351 3.9e-16 88.6 144 41.7
Gorai.008G287300 Gossypium raimondii HOM05D000641 ORTHO05D007351 5.1e-16 88.2 143 40.6
Aqoxy3G02597 Aquilegia oxysepala HOM05D000641 ORTHO05D007351 6.7e-16 87.8 143 39.9
Gohir.D12G267300 Gossypium hirsutum HOM05D000641 ORTHO05D007351 6.7e-16 87.8 143 42.0
TWI63G1332 Tripterygium wilfordii HOM05D000641 ORTHO05D007351 6.7e-16 87.8 143 39.9
Migut.M01486 Erythranthe guttata HOM05D000641 ORTHO05D007351 8.7e-16 87.4 144 38.9
MSTRG.14577 Avicennia marina HOM05D000641 ORTHO05D007351 1.1e-15 87.0 145 38.6
Thecc.06G244800 Theobroma cacao HOM05D000641 ORTHO05D007351 1.1e-15 87.0 144 40.3
Migut.H01644 Erythranthe guttata HOM05D000641 ORTHO05D007351 1.9e-15 86.3 144 41.0
PSO063G1593 Papaver somniferum HOM05D000641 ORTHO05D007351 2.5e-15 85.9 144 41.0
TAR623G1040 Trochodendron aralioides HOM05D000641 ORTHO05D007351 2.5e-15 85.9 154 39.6
Oeu025985.1 Olea europaea HOM05D000641 ORTHO05D007351 3.3e-15 85.5 137 39.4
PSO782G1815 Papaver somniferum HOM05D000641 ORTHO05D007351 3.3e-15 85.5 144 41.0
Nitab4.5_0005056g0070 Nicotiana tabacum HOM05D000641 ORTHO05D007351 4.3e-15 85.1 144 42.4
Phvul.006G134011 Phaseolus vulgaris HOM05D000641 ORTHO05D007351 7.4e-15 84.3 46 93.5
BcaB01g03325 Brassica carinata HOM05D000641 ORTHO05D007351 9.6e-15 84.0 144 37.5
Haze_07064 Corylus avellana HOM05D000641 ORTHO05D007351 9.6e-15 84.0 136 41.9
CAN.G134.47 Capsicum annuum HOM05D000641 ORTHO05D007351 1.3e-14 83.6 142 39.4
Nitab4.5_0001611g0110 Nicotiana tabacum HOM05D000641 ORTHO05D007351 1.3e-14 83.6 139 40.3
Solyc01g096840.3 Solanum lycopersicum HOM05D000641 ORTHO05D007351 1.3e-14 83.6 142 42.3
Sopen01g040550 Solanum pennellii HOM05D000641 ORTHO05D007351 1.3e-14 83.6 142 42.3
MBI14_g11780_MAGBIO Magnolia biondii HOM05D000641 ORTHO05D007351 1.6e-14 83.2 144 40.3
PGSC0003DMG400027505 Solanum tuberosum HOM05D000641 ORTHO05D007351 2.1e-14 82.8 142 41.5
HanXRQChr16g0515301 Helianthus annuus HOM05D000641 ORTHO05D007351 3.7e-14 82.0 144 35.4
Cpa.g.sc27.181 Carica papaya HOM05D000641 ORTHO05D007351 8.2e-14 80.9 137 41.6
Haze_19388 Corylus avellana HOM05D000641 ORTHO05D007351 8.2e-14 80.9 131 41.2
Hund04725 Selenicereus undatus HOM05D000641 ORTHO05D007351 1.1e-13 80.5 156 37.2
GSVIVG01038135001 Vitis vinifera HOM05D003796 ORTHO05D004486 1.4e-13 80.1 143 39.2
Nn1g08378 Nelumbo nucifera HOM05D000641 ORTHO05D007351 2.4e-13 79.3 145 37.2
Sc11g0005780 Simmondsia chinensis HOM05D000641 ORTHO05D007351 2.4e-13 79.3 155 36.1
unitig_0.g969 Utricularia gibba HOM05D000641 ORTHO05D007351 2.4e-13 79.3 143 35.0
SGA_v2.0_scaffold186G40163 Striga asiatica HOM05D000641 ORTHO05D007351 3.1e-13 79.0 144 36.8
Eucgr.D00975 Eucalyptus grandis HOM05D000641 ORTHO05D007351 5.3e-13 78.2 142 35.2
THA.LOC104827569 Tarenaya hassleriana HOM05D000641 ORTHO05D007351 5.3e-13 78.2 141 37.6
BcaC01g05182 Brassica carinata HOM05D000641 ORTHO05D007351 9.0e-13 77.4 142 35.9
BolC3t15294H Brassica oleracea HOM05D000641 ORTHO05D007351 9.0e-13 77.4 142 35.9
C03p29460 Brassica napus HOM05D000641 ORTHO05D007351 1.2e-12 77.0 142 35.9
Lsat_1_v5_gn_4_65181 Lactuca sativa HOM05D000641 ORTHO05D007351 1.2e-12 77.0 144 34.7
BraA03t11678Z Brassica rapa HOM05D000641 ORTHO05D007351 2.0e-12 76.3 142 35.2
AT2G44190 Arabidopsis thaliana HOM05D000641 ORTHO05D007351 3.4e-12 75.5 141 36.2
BcaC02g12331 Brassica carinata HOM05D000641 ORTHO05D007351 4.5e-12 75.1 141 31.9
A03p24720 Brassica napus HOM05D000641 ORTHO05D007351 4.5e-12 75.1 142 35.2
C04p05060 Brassica napus HOM05D000641 ORTHO05D007351 4.5e-12 75.1 141 31.9
Thhalv10001435m.g Eutrema salsugineum HOM05D000641 ORTHO05D007351 4.5e-12 75.1 145 33.8
A05p04280 Brassica napus HOM05D000641 ORTHO05D007351 5.9e-12 74.7 141 35.5
CARHR139350 Cardamine hirsuta HOM05D000641 ORTHO05D007351 5.9e-12 74.7 140 35.0
Carub.0004s2676 Capsella rubella HOM05D000641 ORTHO05D007351 7.6e-12 74.3 141 34.8
BraA05t19413Z Brassica rapa HOM05D000641 ORTHO05D007351 1.3e-11 73.6 141 34.8
Sp4g26270 Schrenkiella parvula HOM05D000641 ORTHO05D007351 1.3e-11 73.6 141 34.0
AL4G43140 Arabidopsis lyrata HOM05D000641 ORTHO05D007351 1.7e-11 73.2 141 34.8
THA.LOC104804470 Tarenaya hassleriana HOM05D000641 ORTHO05D007351 1.7e-11 73.2 141 35.5
Aa31LG1G25850 Aethionema arabicum HOM05D000641 ORTHO05D007351 2.9e-11 72.4 145 33.8
ECA234G1980 Erigeron canadensis HOM05D000641 ORTHO05D007351 6.5e-11 71.2 143 36.4
ECA234G3276 Erigeron canadensis HOM05D000641 ORTHO05D007351 6.5e-11 71.2 144 31.9
BolC4t22139H Brassica oleracea HOM05D000641 ORTHO05D007351 1.1e-10 70.5 142 31.7
BraA04t18783Z Brassica rapa HOM05D000641 ORTHO05D007351 3.2e-10 68.9 141 34.0
PGR004G1652 Punica granatum HOM05D000641 ORTHO05D007351 3.2e-10 68.9 45 73.3
BcaB06g29364 Brassica carinata HOM05D000641 ORTHO05D007351 7.2e-10 67.8 141 32.6
HPP92_020491 Vanilla planifolia HOM05D000641 ORTHO05D007351 7.2e-10 67.8 142 33.8
Cc09_g00010 Coffea canephora HOM05D000641 ORTHO05D007351 1.2e-09 67.0 143 36.4
Thhalv10006479m.g Eutrema salsugineum HOM05D000641 ORTHO05D007351 2.1e-09 66.2 152 35.5
AL5G42180 Arabidopsis lyrata HOM05D000641 ORTHO05D007351 2.7e-09 65.9 144 34.7
ATR0751G229 Amborella trichopoda HOM05D000641 ORTHO05D007351 3.5e-09 65.5 145 34.5
Cpa.g.sc27.177 Carica papaya HOM05D000641 ORTHO05D007351 4.6e-09 65.1 51 62.7
Sp5g03180 Schrenkiella parvula HOM05D000641 ORTHO05D007351 4.6e-09 65.1 144 32.6
Carub.0005s2673 Capsella rubella HOM05D000641 ORTHO05D007351 1.0e-08 63.9 144 34.0
C04p70930 Brassica napus HOM05D000641 ORTHO05D007351 5.1e-08 61.6 166 28.9
BolC4t28593H Brassica oleracea HOM05D000641 ORTHO05D007351 5.1e-08 61.6 141 31.2
CARHR170320 Cardamine hirsuta HOM05D000641 ORTHO05D007351 5.1e-08 61.6 145 33.8
CDE06G0961 Ceratophyllum demersum HOM05D000641 ORTHO05D000944 6.7e-08 61.2 141 29.8
MBI15_g27188_MAGBIO Magnolia biondii HOM05D000641 ORTHO05D000944 6.7e-08 61.2 144 31.2
Actinidia38099 Actinidia chinensis HOM05D000641 ORTHO05D000944 8.7e-08 60.8 137 28.5
CDE06G1215 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 8.7e-08 60.8 127 35.4
A04p33240 Brassica napus HOM05D000914 ORTHO05D000718 2.5e-07 59.3 123 36.6
CSS0040494 Camellia sinensis var. sinensis HOM05D000641 ORTHO05D000944 2.5e-07 59.3 145 28.3
Nitab4.5_0001105g0160 Nicotiana tabacum HOM05D000641 ORTHO05D000944 2.5e-07 59.3 145 28.3
Actinidia22684 Actinidia chinensis HOM05D000641 ORTHO05D000944 3.3e-07 58.9 145 29.7
PGSC0003DMG400021528 Solanum tuberosum HOM05D000641 ORTHO05D000944 3.3e-07 58.9 145 29.0
Solyc04g078000.3 Solanum lycopersicum HOM05D000641 ORTHO05D000944 4.3e-07 58.5 145 29.0
Sopen04g031600 Solanum pennellii HOM05D000641 ORTHO05D000944 4.3e-07 58.5 145 29.0
CSS0009467 Camellia sinensis var. sinensis HOM05D000641 ORTHO05D000944 5.7e-07 58.2 145 28.3
MD08G1086900 Malus domestica HOM05D000641 ORTHO05D000944 5.7e-07 58.2 144 31.2
Sopen01g049460 Solanum pennellii HOM05D000641 ORTHO05D000944 5.7e-07 58.2 145 28.3
AT3G60000 Arabidopsis thaliana HOM05D000641 ORTHO05D007351 7.4e-07 57.8 137 35.8
GSVIVG01009361001 Vitis vinifera HOM05D000641 ORTHO05D000944 7.4e-07 57.8 145 29.7
ATR0019G047 Amborella trichopoda HOM05D000641 ORTHO05D000944 9.7e-07 57.4 141 30.5
Cfa013676 Carpinus fangiana HOM05D000641 ORTHO05D000944 9.7e-07 57.4 145 28.3
Hma1.2p1_1174F.1_g263800 Hydrangea macrophylla HOM05D000641 ORTHO05D000944 9.7e-07 57.4 145 28.3
Dinv15796 Davidia involucrata HOM05D000641 ORTHO05D000944 1.3e-06 57.0 145 28.3
Eucgr.C02506 Eucalyptus grandis HOM05D000641 ORTHO05D000944 1.3e-06 57.0 145 30.3
TAR381G0627 Trochodendron aralioides HOM05D000641 ORTHO05D000944 1.3e-06 57.0 139 30.2
CAN.G724.7 Capsicum annuum HOM05D000641 ORTHO05D000944 1.6e-06 56.6 145 29.0
Cc10_g05630 Coffea canephora HOM05D000641 ORTHO05D000944 1.6e-06 56.6 145 28.3
FAN20G1023 Fragaria x ananassa HOM05D000641 ORTHO05D000944 2.2e-06 56.2 145 29.0
MD15G1071600 Malus domestica HOM05D000641 ORTHO05D000944 2.2e-06 56.2 147 28.6
Dinv42224 Davidia involucrata HOM05D000641 ORTHO05D000944 2.8e-06 55.8 145 28.3
Manes.05G180700 Manihot esculenta HOM05D000641 ORTHO05D000944 2.8e-06 55.8 155 28.4
Manes.18G045100 Manihot esculenta HOM05D000641 ORTHO05D000944 2.8e-06 55.8 149 30.9
RcHm_v2.0_Chr6g0309371 Rosa chinensis HOM05D000641 ORTHO05D000944 2.8e-06 55.8 145 29.7
FvH4_2g33270 Fragaria vesca HOM05D000641 ORTHO05D000944 3.7e-06 55.5 145 29.0
Peaxi162Scf00081g00148 Petunia axillaris HOM05D000641 ORTHO05D000944 3.7e-06 55.5 145 28.3
FAN15G3605 Fragaria x ananassa HOM05D000641 ORTHO05D000944 4.8e-06 55.1 145 29.0
TPR.G27080 Trifolium pratense HOM05D000641 ORTHO05D000944 4.8e-06 55.1 144 29.9
TWI12G0257 Tripterygium wilfordii HOM05D000641 ORTHO05D000944 4.8e-06 55.1 141 29.8
unitig_22.g6843 Utricularia gibba HOM05D000641 ORTHO05D000944 4.8e-06 55.1 143 28.7
CANSAT25G2917 Cannabis sativa HOM05D000641 ORTHO05D000944 8.2e-06 54.3 150 28.0
ClCG02G006740 Citrullus lanatus HOM05D000641 ORTHO05D000944 8.2e-06 54.3 150 28.7
MELO3C018513.2 Cucumis melo HOM05D000641 ORTHO05D000944 8.2e-06 54.3 150 28.7
CsaV3_7G007900 Cucumis sativus L. HOM05D000641 ORTHO05D000944 8.2e-06 54.3 150 28.7


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