Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G090100 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 4.0e-56 221.1 104 100.0
Phvul.002G055350 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 1.3e-46 189.5 95 93.7
Lj5g0000109 Lotus japonicus HOM05D000920 ORTHO05D000626 3.6e-41 171.4 92 89.1
LjContig00488g0002218 Lotus japonicus HOM05D000920 ORTHO05D000626 3.6e-41 171.4 92 89.1
unitig_885.g34269 Utricularia gibba HOM05D001018 ORTHO05D000626 3.4e-39 164.9 96 83.3
unitig_102.g31708 Utricularia gibba HOM05D001018 ORTHO05D000626 1.3e-35 152.9 96 78.1
unitig_791.g33060 Utricularia gibba HOM05D001018 ORTHO05D000626 5.6e-34 147.5 93 79.6
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 6.2e-33 144.1 100 75.0
unitig_172.g35454 Utricularia gibba HOM05D001018 ORTHO05D000626 5.5e-29 131.0 107 66.4
unitig_721.g34549 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-26 120.9 103 63.1
Sopen00g001850 Solanum pennellii HOM05D001018 ORTHO05D000626 2.1e-25 119.0 102 60.8
unitig_579.g34798 Utricularia gibba HOM05D001018 ORTHO05D000626 1.2e-23 113.2 93 63.4
Phvul.011G157400 Phaseolus vulgaris HOM05D001018 ORTHO05D000626 1.5e-23 112.8 52 96.2
TAR371G1186 Trochodendron aralioides HOM05D005014 ORTHO05D003704 5.8e-23 110.9 74 74.3
Sopen12g025310 Solanum pennellii HOM05D000920 ORTHO05D000626 1.7e-22 109.4 60 88.3
unitig_685.g33146 Utricularia gibba HOM05D001018 ORTHO05D000626 3.8e-22 108.2 103 58.3
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 5.0e-22 107.8 60 86.7
Sopen00g001690 Solanum pennellii HOM05D000920 ORTHO05D000626 8.4e-22 107.1 67 77.6
unitig_668.g29654 Utricularia gibba HOM05D000920 ORTHO05D004854 1.9e-21 105.9 69 79.7
unitig_682.g30168 Utricularia gibba HOM05D000920 ORTHO05D000626 4.2e-21 104.8 62 83.9
unitig_724.g29527 Utricularia gibba HOM05D000920 ORTHO05D004854 7.2e-21 104.0 60 86.7
unitig_146.g30252 Utricularia gibba HOM05D000920 ORTHO05D004854 1.2e-20 103.2 65 81.5
unitig_146.g30219 Utricularia gibba HOM05D000920 ORTHO05D000626 2.7e-20 102.1 59 86.4
unitig_161.g31377 Utricularia gibba HOM05D000920 ORTHO05D000626 2.7e-20 102.1 59 86.4
unitig_675.g29244 Utricularia gibba HOM05D000920 ORTHO05D003704 2.7e-20 102.1 59 86.4
unitig_683.g34677 Utricularia gibba HOM05D000920 ORTHO05D000626 2.7e-20 102.1 59 86.4
unitig_796.g33546 Utricularia gibba HOM05D000920 ORTHO05D000626 2.7e-20 102.1 59 86.4
unitig_814.g34350 Utricularia gibba HOM05D000920 ORTHO05D003704 2.7e-20 102.1 59 86.4
Sopen00g001770 Solanum pennellii HOM05D000920 ORTHO05D004854 5.1e-19 97.8 61 83.6
ScUNg0001590 Simmondsia chinensis HOM05D001018 ORTHO05D000626 4.3e-18 94.7 103 53.4
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 9.7e-18 93.6 66 75.8
unitig_659.g33188 Utricularia gibba HOM05D008864 ORTHO05D004854 1.1e-16 90.1 56 82.1
Sc21g0003490 Simmondsia chinensis HOM05D000920 ORTHO05D000626 1.4e-16 89.7 57 77.2
ScUNg0001140 Simmondsia chinensis HOM05D000920 ORTHO05D000626 1.8e-16 89.4 69 68.1
Sc06g0003820 Simmondsia chinensis HOM05D000920 ORTHO05D000626 5.3e-16 87.8 65 67.7
Atru.chr9.100 Acer truncatum HOM05D000920 ORTHO05D000626 9.0e-16 87.0 57 77.2
unitig_547.g33738 Utricularia gibba HOM05D000920 ORTHO05D000626 1.5e-15 86.3 69 68.1
unitig_581.g33720 Utricularia gibba HOM05D001018 ORTHO05D000626 1.5e-15 86.3 103 50.5
unitig_680.g33583 Utricularia gibba HOM05D000920 ORTHO05D000626 1.5e-15 86.3 69 68.1
unitig_798.g32494 Utricularia gibba HOM05D000920 ORTHO05D000626 1.5e-15 86.3 69 68.1
EL10As7g23722 Beta vulgaris HOM05D000920 ORTHO05D000626 2.6e-15 85.5 68 69.1
CiPaw.15G104700 Carya illinoinensis HOM05D001018 ORTHO05D000626 5.0e-14 81.3 104 49.0
Sopen07g009440 Solanum pennellii HOM05D000920 ORTHO05D004854 8.5e-14 80.5 58 75.9
Potri.008G224210 Populus trichocarpa HOM05D001018 ORTHO05D000626 1.1e-13 80.1 104 48.1
Potri.014G185588 Populus trichocarpa HOM05D001018 ORTHO05D000626 1.1e-13 80.1 104 48.1
Potri.014G185804 Populus trichocarpa HOM05D001018 ORTHO05D000626 1.1e-13 80.1 104 48.1
Potri.014G186452 Populus trichocarpa HOM05D001018 ORTHO05D000626 1.1e-13 80.1 104 48.1
CiPaw.15G105700 Carya illinoinensis HOM05D001018 ORTHO05D000626 3.2e-13 78.6 104 48.1
Manes.S041816 Manihot esculenta HOM05D001018 ORTHO05D000626 3.2e-13 78.6 104 48.1
CiPaw.05G154900 Carya illinoinensis HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 48.1
CiPaw.05G155900 Carya illinoinensis HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 48.1
CiPaw.05G156000 Carya illinoinensis HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 48.1
CiPaw.15G103300 Carya illinoinensis HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 48.1
Manes.15G193301 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.18G143401 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S001635 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S003597 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S004905 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S005886 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S007848 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S011772 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S015696 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S017986 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S020275 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S024052 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S024852 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S025016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S026216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S026252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S026952 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S027016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S027516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S029252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S029752 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S030016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S030252 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S031516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S031716 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S032416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S032916 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S033816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S034816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S035416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S036516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S036816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S037516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S039116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S041116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S043216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S043916 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S045216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S046916 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S048416 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S049316 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S051116 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S051616 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S052516 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S053016 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S053216 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Manes.S054816 Manihot esculenta HOM05D001018 ORTHO05D000626 4.2e-13 78.2 104 47.1
Gorai.001G276600 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.5e-13 77.8 104 49.0
Gorai.001G276700 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.5e-13 77.8 104 49.0
Gorai.001G276800 Gossypium raimondii HOM05D001018 ORTHO05D000626 5.5e-13 77.8 104 49.0
Manes.S028116 Manihot esculenta HOM05D001018 ORTHO05D000626 9.4e-13 77.0 104 47.1
Migut.A01240 Erythranthe guttata HOM05D001018 ORTHO05D000626 1.2e-12 76.6 104 47.1
QL11p027314 Quercus lobata HOM05D001018 ORTHO05D000626 1.2e-12 76.6 104 47.1
Manes.S033916 Manihot esculenta HOM05D001018 ORTHO05D000626 2.1e-12 75.9 52 69.2
ScUNg0001640 Simmondsia chinensis HOM05D001018 ORTHO05D000626 2.1e-12 75.9 104 48.1
Migut.A01079 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 104 46.2
Migut.A01215 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 32 93.8
Migut.A01220 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 32 93.8
Migut.A01234 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 104 46.2
Migut.A01241 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 104 46.2
Migut.A01245 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 104 46.2
Migut.C00303 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 32 93.8
Migut.G00890 Erythranthe guttata HOM05D001018 ORTHO05D000626 2.7e-12 75.5 104 46.2
RhsimUnG0194800 Rhododendron simsii HOM05D000920 ORTHO05D000626 2.7e-12 75.5 65 60.0
unitig_670.g34683 Utricularia gibba HOM05D001018 ORTHO05D000626 3.6e-12 75.1 103 45.6
Atru.chr6.2695 Acer truncatum HOM05D001018 ORTHO05D000626 4.6e-12 74.7 104 48.1
Atru.chr10.41 Acer truncatum HOM05D001018 ORTHO05D000626 7.9e-12 73.9 33 90.9
CSS0025197 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 7.9e-12 73.9 104 48.1
CSS0041698 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 7.9e-12 73.9 104 48.1
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 7.9e-12 73.9 97 45.4
Sed0017842 Sechium edule HOM05D001018 ORTHO05D000626 1.4e-11 73.2 105 47.6
CSS0020036 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.8e-11 72.8 105 48.6
CSS0050263 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 1.8e-11 72.8 105 48.6
Cpa.g.sc15.36 Carica papaya HOM05D000920 ORTHO05D000626 1.8e-11 72.8 71 59.2
CSS0000564 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 3.0e-11 72.0 103 45.6
Migut.A01196 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.0e-11 72.0 104 45.2
Sopen00g002220 Solanum pennellii HOM05D001018 ORTHO05D000626 6.7e-11 70.9 104 47.1
PGSC0003DMG402019042 Solanum tuberosum HOM05D001018 ORTHO05D000626 6.7e-11 70.9 104 47.1
Sc21g0003260 Simmondsia chinensis HOM05D000920 ORTHO05D000626 1.5e-10 69.7 64 57.8
Sc21g0003480 Simmondsia chinensis HOM05D000920 ORTHO05D000626 1.5e-10 69.7 64 57.8
CSS0026871 Camellia sinensis var. sinensis HOM05D001018 ORTHO05D000626 2.0e-10 69.3 104 46.2
Sopen07g009370 Solanum pennellii HOM05D000920 ORTHO05D000626 2.5e-10 68.9 59 66.1
HPP92_020620 Vanilla planifolia HOM05D000099 ORTHO05D000205 2.5e-10 68.9 32 87.5
Migut.A01194 Erythranthe guttata HOM05D001018 ORTHO05D000626 3.3e-10 68.6 29 89.7
Migut.A01193 Erythranthe guttata HOM05D001018 ORTHO05D000626 5.7e-10 67.8 103 41.7
unitig_102.g31721 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-10 67.8 69 58.0
unitig_130.g30130 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-10 67.8 69 58.0
unitig_139.g29609 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-10 67.8 69 58.0
unitig_161.g31392 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-10 67.8 69 58.0
unitig_783.g29408 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-10 67.8 69 58.0
unitig_792.g32521 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-10 67.8 69 58.0
unitig_892.g32991 Utricularia gibba HOM05D001018 ORTHO05D000626 5.7e-10 67.8 69 58.0
EL10Ac4g09822 Beta vulgaris HOM05D000920 ORTHO05D000626 9.7e-10 67.0 89 53.9
unitig_8.g4073 Utricularia gibba HOM05D000920 ORTHO05D004854 1.7e-09 66.2 58 67.2
BcaNung04859 Brassica carinata HOM05D000920 ORTHO05D019903 2.8e-09 65.5 61 67.2
Sopen07g009480 Solanum pennellii HOM05D001018 ORTHO05D000626 6.3e-09 64.3 104 44.2
Zm00001eb439210 Zea mays HOM05D000920 ORTHO05D000626 6.3e-09 64.3 52 63.5
Zm00001eb263670 Zea mays HOM05D010106 ORTHO05D000626 8.2e-09 63.9 57 59.6
unitig_807.g34417 Utricularia gibba HOM05D000920 ORTHO05D000626 2.4e-08 62.4 48 66.7
SHI35535 Sapria himalayana HOM05D015261 ORTHO05D001679 4.1e-08 61.6 38 81.6
SHI35538 Sapria himalayana HOM05D015261 ORTHO05D001679 4.1e-08 61.6 38 81.6
SHI39806 Sapria himalayana HOM05D015261 ORTHO05D001679 4.1e-08 61.6 38 81.6
SHI39841 Sapria himalayana HOM05D015261 ORTHO05D001679 4.1e-08 61.6 38 81.6
SHI41312 Sapria himalayana HOM05D015261 ORTHO05D004854 4.1e-08 61.6 38 81.6
SHI41730 Sapria himalayana HOM05D015261 ORTHO05D004854 4.1e-08 61.6 38 81.6
SHI42217 Sapria himalayana HOM05D015261 ORTHO05D004854 4.1e-08 61.6 38 81.6
unitig_269.g35314 Utricularia gibba HOM05D001018 ORTHO05D000626 1.2e-07 60.1 69 53.6
Zm00001eb262130 Zea mays HOM05D010106 ORTHO05D000626 2.0e-07 59.3 54 59.3
Zm00001eb263830 Zea mays HOM05D010106 ORTHO05D000626 2.0e-07 59.3 54 59.3
Sopen06g008620 Solanum pennellii HOM05D000920 ORTHO05D000626 2.6e-07 58.9 60 63.3
Zm00001eb263800 Zea mays HOM05D010106 ORTHO05D000626 2.2e-06 55.8 49 59.2
A05p22440 Brassica napus HOM05D000920 ORTHO05D004854 2.9e-06 55.5 40 70.0
FAN03G0715 Fragaria x ananassa HOM05D001018 ORTHO05D000626 2.9e-06 55.5 70 50.0
unitig_678.g33163 Utricularia gibba HOM05D001018 ORTHO05D000626 3.8e-06 55.1 69 50.7
Zm00001eb263570 Zea mays HOM05D000920 ORTHO05D000626 3.8e-06 55.1 72 45.8


User provided reference genes

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