Notice (8): Undefined variable: source_groups_information [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001018', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001018' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001018' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001018' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001018' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
<label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
<label>Source(s)</label>
<select class='form form-select' name='ontology_source_group' id='ontology_source_group'>
<?php foreach ($source_groups_information['available'] as $source_group_id) : ?>
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001018', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001018' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001018' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001018' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001018' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' )
include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Notice (8): Trying to access array offset on value of type null [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001018', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001018' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001018' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001018' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001018' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151
Warning (2): Invalid argument supplied for foreach() [APP/View/Tools/similarity_heatmap.ctp, line 77]Code Context <label>Source(s)</label> <select class='form form-select' name='ontology_source_group' id='ontology_source_group'> <?php foreach ($source_groups_information['available'] as $source_group_id) : ?> $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Tools/similarity_heatmap.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'gene_selection' => array( 'parameters' => array( (int) 0 => array( [maximum depth reached] ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ), 'data_type' => 'gene_family', 'gf_id' => 'HOM05D001018', 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D001018' ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'subfamily_family_types' => array( (int) 0 => 'ORTHOFAM' ), 'parental_family_types' => array( (int) 0 => 'HOMFAM' ), 'gene_family_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'allowed_data_types' => array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) ) $sidebar_info = array( 'gf_id' => 'HOM05D001018', 'msa_exists' => array( 'full' => true, 'edited' => true ), 'tree_exists' => true, 'num_genes' => '595', 'num_species' => '24' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $gene_selection = array( 'parameters' => array( (int) 0 => array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' ) ), 'genes' => array( 'A05p21940' => 'bna', 'A05p22280' => 'bna', 'A05p22360' => 'bna', 'A06p24120' => 'bna', 'Atru.chr10.41' => 'acertr', 'Atru.chr6.2695' => 'acertr', 'CDE02G3011' => 'cde', 'CiPaw.05G153900' => 'cil', 'CiPaw.05G154900' => 'cil', 'CiPaw.05G155900' => 'cil', 'CiPaw.05G156000' => 'cil', 'CiPaw.15G099800' => 'cil', 'CiPaw.15G103300' => 'cil', 'CiPaw.15G104700' => 'cil', 'CiPaw.15G105700' => 'cil', 'CiPaw.15G106100' => 'cil', 'Cpa.g.sc2112.2' => 'cpa', 'CSS0000564' => 'camsi', 'CSS0020036' => 'camsi', 'CSS0025197' => 'camsi', 'CSS0026871' => 'camsi', 'CSS0041698' => 'camsi', 'CSS0050263' => 'camsi', 'EL10As19g24175' => 'bvu', 'EL10As19g24176' => 'bvu', 'EL10As19g24177' => 'bvu', 'FAN03G0715' => 'fan', 'FAN17G1090' => 'fan', 'Glyma.13G011200' => 'gma', 'Glyma.U009202' => 'gma', 'Gorai.001G276600' => 'gra', 'Gorai.001G276700' => 'gra', 'Gorai.001G276800' => 'gra', 'LjContig00006g0002932' => 'lja', 'LjContig00488g0014329' => 'lja', 'Manes.15G193301' => 'mes', 'Manes.18G143401' => 'mes', 'Manes.S001635' => 'mes', 'Manes.S003597' => 'mes', 'Manes.S004905' => 'mes', 'Manes.S005886' => 'mes', 'Manes.S007848' => 'mes', 'Manes.S011772' => 'mes', 'Manes.S015696' => 'mes', 'Manes.S017986' => 'mes', 'Manes.S020275' => 'mes', 'Manes.S024052' => 'mes', 'Manes.S024852' => 'mes', 'Manes.S025016' => 'mes', 'Manes.S026216' => 'mes', 'Manes.S026252' => 'mes', 'Manes.S026952' => 'mes', 'Manes.S027016' => 'mes', 'Manes.S027516' => 'mes', 'Manes.S028116' => 'mes', 'Manes.S029252' => 'mes', 'Manes.S029752' => 'mes', 'Manes.S030016' => 'mes', 'Manes.S030252' => 'mes', 'Manes.S031516' => 'mes', 'Manes.S031716' => 'mes', 'Manes.S032416' => 'mes', 'Manes.S032916' => 'mes', 'Manes.S033816' => 'mes', 'Manes.S033916' => 'mes', 'Manes.S034816' => 'mes', 'Manes.S035416' => 'mes', 'Manes.S036516' => 'mes', 'Manes.S036816' => 'mes', 'Manes.S037516' => 'mes', 'Manes.S039116' => 'mes', 'Manes.S041116' => 'mes', 'Manes.S041816' => 'mes', 'Manes.S043216' => 'mes', 'Manes.S043916' => 'mes', 'Manes.S045216' => 'mes', 'Manes.S046916' => 'mes', 'Manes.S048416' => 'mes', 'Manes.S049316' => 'mes', 'Manes.S051116' => 'mes', 'Manes.S051616' => 'mes', 'Manes.S052516' => 'mes', 'Manes.S053016' => 'mes', 'Manes.S053216' => 'mes', 'Manes.S054816' => 'mes', 'Mapoly0065s0075' => 'mpo', 'Migut.A01079' => 'egut', 'Migut.A01193' => 'egut', 'Migut.A01194' => 'egut', 'Migut.A01196' => 'egut', 'Migut.A01215' => 'egut', 'Migut.A01220' => 'egut', 'Migut.A01232' => 'egut', 'Migut.A01234' => 'egut', 'Migut.A01240' => 'egut', 'Migut.A01241' => 'egut', 'Migut.A01245' => 'egut', 'Migut.C00303' => 'egut', 'Migut.G00890' => 'egut', 'Nn038s41631' => 'nnu', 'Nn038s41654' => 'nnu', 'Nn038s41676' => 'nnu', 'Nn038s41699' => 'nnu', 'Nn040s41724' => 'nnu', 'Nn040s41730' => 'nnu', 'Nn040s41746' => 'nnu', 'Nn040s41752' => 'nnu', 'Nn040s41769' => 'nnu', 'Nn040s41775' => 'nnu', 'Nn040s41792' => 'nnu', 'Nn040s41798' => 'nnu', 'Nn046s41820' => 'nnu', 'Nn046s41844' => 'nnu', 'Nn046s41867' => 'nnu', 'Nn046s41873' => 'nnu', 'Nn046s41890' => 'nnu', 'Nn058s41956' => 'nnu', 'Nn058s41962' => 'nnu', 'Nn058s41984' => 'nnu', 'Nn059s42003' => 'nnu', 'Nn059s42020' => 'nnu', 'Nn059s42026' => 'nnu', 'Nn059s42043' => 'nnu', 'Nn059s42049' => 'nnu', 'Nn061s42070' => 'nnu', 'Nn061s42076' => 'nnu', 'Nn061s42093' => 'nnu', 'Nn061s42099' => 'nnu', 'Nn061s42116' => 'nnu', 'Nn061s42122' => 'nnu', 'Nn062s42149' => 'nnu', 'Nn062s42172' => 'nnu', 'Nn062s42194' => 'nnu', 'Nn067s42231' => 'nnu', 'Nn067s42236' => 'nnu', 'Nn067s42253' => 'nnu', 'Nn067s42259' => 'nnu', 'Nn067s42275' => 'nnu', 'Nn069s42313' => 'nnu', 'Nn069s42319' => 'nnu', 'Nn069s42343' => 'nnu', 'Nn069s42365' => 'nnu', 'Nn072s42399' => 'nnu', 'Nn072s42405' => 'nnu', 'Nn072s42422' => 'nnu', 'Nn072s42428' => 'nnu', 'Nn072s42444' => 'nnu', 'Nn072s42450' => 'nnu', 'Nn076s42470' => 'nnu', 'Nn076s42493' => 'nnu', 'Nn076s42516' => 'nnu', 'Nn076s42522' => 'nnu', 'Nn076s42532' => 'nnu', 'Nn076s42539' => 'nnu', 'Nn077s42561' => 'nnu', 'Nn077s42584' => 'nnu', 'Nn077s42606' => 'nnu', 'Nn078s42615' => 'nnu', 'Nn078s42632' => 'nnu', 'Nn078s42638' => 'nnu', 'Nn078s42654' => 'nnu', 'Nn078s42660' => 'nnu', 'Nn085s42701' => 'nnu', 'Nn085s42707' => 'nnu', 'Nn085s42734' => 'nnu', 'Nn085s42757' => 'nnu', 'Nn087s42773' => 'nnu', 'Nn087s42779' => 'nnu', 'Nn087s42801' => 'nnu', 'Nn090s42819' => 'nnu', 'Nn090s42842' => 'nnu', 'Nn090s42864' => 'nnu', 'Nn094s42890' => 'nnu', 'Nn094s42896' => 'nnu', 'Nn094s42915' => 'nnu', 'Nn094s42921' => 'nnu', 'Nn094s42938' => 'nnu', 'Nn094s42944' => 'nnu', 'Nn095s42947' => 'nnu', 'Nn095s42953' => 'nnu', 'Nn095s42970' => 'nnu', 'Nn095s42976' => 'nnu', 'Nn095s42992' => 'nnu', 'Nn097s43028' => 'nnu', 'Nn097s43034' => 'nnu', 'Nn097s43051' => 'nnu', 'Nn097s43057' => 'nnu', 'Nn098s43090' => 'nnu', 'Nn098s43113' => 'nnu', 'Nn104s43126' => 'nnu', 'Nn104s43131' => 'nnu', 'Nn104s43157' => 'nnu', 'Nn104s43173' => 'nnu', 'Nn104s43179' => 'nnu', 'Nn105s43185' => 'nnu', 'Nn105s43208' => 'nnu', 'Nn105s43214' => 'nnu', 'Nn105s43229' => 'nnu', 'Nn105s43236' => 'nnu', 'Nn108s43252' => 'nnu', 'Nn108s43258' => 'nnu', 'Nn108s43275' => 'nnu', 'Nn108s43281' => 'nnu', 'Nn108s43297' => 'nnu', 'Nn108s43303' => 'nnu', 'Nn110s43312' => 'nnu', 'Nn110s43335' => 'nnu', 'Nn110s43358' => 'nnu', 'Nn116s43404' => 'nnu', 'Nn119s43424' => 'nnu', 'Nn119s43448' => 'nnu', 'Nn119s43470' => 'nnu', 'Nn122s43493' => 'nnu', 'Nn122s43509' => 'nnu', 'Nn122s43515' => 'nnu', 'Nn124s43546' => 'nnu', 'Nn124s43562' => 'nnu', 'Nn124s43568' => 'nnu', 'Nn125s43592' => 'nnu', 'Nn125s43615' => 'nnu', 'Nn125s43621' => 'nnu', 'Nn126s43646' => 'nnu', 'Nn126s43652' => 'nnu', 'Nn126s43669' => 'nnu', 'Nn126s43675' => 'nnu', 'Nn127s43685' => 'nnu', 'Nn127s43691' => 'nnu', 'Nn129s43718' => 'nnu', 'Nn129s43724' => 'nnu', 'Nn129s43740' => 'nnu', 'Nn129s43746' => 'nnu', 'Nn130s43753' => 'nnu', 'Nn130s43770' => 'nnu', 'Nn130s43776' => 'nnu', 'Nn130s43792' => 'nnu', 'Nn136s43828' => 'nnu', 'Nn136s43850' => 'nnu', 'Nn137s43863' => 'nnu', 'Nn137s43886' => 'nnu', 'Nn139s43905' => 'nnu', 'Nn139s43911' => 'nnu', 'Nn139s43928' => 'nnu', 'Nn141s43956' => 'nnu', 'Nn141s43962' => 'nnu', 'Nn141s43978' => 'nnu', 'Nn141s43984' => 'nnu', 'Nn142s43996' => 'nnu', 'Nn142s44002' => 'nnu', 'Nn142s44019' => 'nnu', 'Nn143s44049' => 'nnu', 'Nn143s44055' => 'nnu', 'Nn143s44072' => 'nnu', 'Nn148s44104' => 'nnu', 'Nn148s44110' => 'nnu', 'Nn148s44127' => 'nnu', 'Nn148s44133' => 'nnu', 'Nn151s44144' => 'nnu', 'Nn151s44150' => 'nnu', 'Nn151s44167' => 'nnu', 'Nn152s44190' => 'nnu', 'Nn152s44213' => 'nnu', 'Nn152s44219' => 'nnu', 'Nn153s44247' => 'nnu', 'Nn153s44263' => 'nnu', 'Nn153s44269' => 'nnu', 'Nn155s44288' => 'nnu', 'Nn155s44295' => 'nnu', 'Nn157s44301' => 'nnu', 'Nn157s44324' => 'nnu', 'Nn157s44330' => 'nnu', 'Nn159s44347' => 'nnu', 'Nn159s44353' => 'nnu', 'Nn159s44370' => 'nnu', 'Nn159s44376' => 'nnu', 'Nn161s44394' => 'nnu', 'Nn161s44400' => 'nnu', 'Nn165s44413' => 'nnu', 'Nn165s44419' => 'nnu', 'Nn165s44441' => 'nnu', 'Nn167s44467' => 'nnu', 'Nn167s44473' => 'nnu', 'Nn175s44500' => 'nnu', 'Nn175s44506' => 'nnu', 'Nn177s44550' => 'nnu', 'Nn177s44556' => 'nnu', 'Nn177s44572' => 'nnu', 'Nn177s44578' => 'nnu', 'Nn178s44602' => 'nnu', 'Nn178s44618' => 'nnu', 'Nn178s44624' => 'nnu', 'Nn185s44644' => 'nnu', 'Nn185s44661' => 'nnu', 'Nn185s44667' => 'nnu', 'Nn188s44688' => 'nnu', 'Nn188s44694' => 'nnu', 'Nn189s44721' => 'nnu', 'Nn189s44727' => 'nnu', 'Nn189s44743' => 'nnu', 'Nn189s44748' => 'nnu', 'Nn190s44758' => 'nnu', 'Nn190s44764' => 'nnu', 'Nn190s44780' => 'nnu', 'Nn190s44786' => 'nnu', 'Nn194s44803' => 'nnu', 'Nn195s44826' => 'nnu', 'Nn196s44843' => 'nnu', 'Nn196s44861' => 'nnu', 'Nn196s44867' => 'nnu', 'Nn1g00018' => 'nnu', 'Nn1g00024' => 'nnu', 'Nn1g00095' => 'nnu', 'Nn200s44885' => 'nnu', 'Nn200s44891' => 'nnu', 'Nn200s44908' => 'nnu', 'Nn200s44914' => 'nnu', 'Nn201s44936' => 'nnu', 'Nn201s44942' => 'nnu', 'Nn202s44957' => 'nnu', 'Nn202s44963' => 'nnu', 'Nn202s44980' => 'nnu', 'Nn202s44986' => 'nnu', 'Nn203s45016' => 'nnu', 'Nn204s45036' => 'nnu', 'Nn204s45042' => 'nnu', 'Nn204s45059' => 'nnu', 'Nn204s45065' => 'nnu', 'Nn207s45084' => 'nnu', 'Nn207s45090' => 'nnu', 'Nn208s45114' => 'nnu', 'Nn208s45120' => 'nnu', 'Nn209s45145' => 'nnu', 'Nn209s45151' => 'nnu', 'Nn209s45166' => 'nnu', 'Nn210s45180' => 'nnu', 'Nn213s45219' => 'nnu', 'Nn213s45236' => 'nnu', 'Nn213s45241' => 'nnu', 'Nn217s45268' => 'nnu', 'Nn220s45294' => 'nnu', 'Nn220s45300' => 'nnu', 'Nn220s45316' => 'nnu', 'Nn220s45322' => 'nnu', 'Nn221s45345' => 'nnu', 'Nn222s45360' => 'nnu', 'Nn222s45366' => 'nnu', 'Nn223s45394' => 'nnu', 'Nn223s45400' => 'nnu', 'Nn224s45418' => 'nnu', 'Nn224s45424' => 'nnu', 'Nn224s45440' => 'nnu', 'Nn224s45446' => 'nnu', 'Nn227s45452' => 'nnu', 'Nn227s45458' => 'nnu', 'Nn227s45475' => 'nnu', 'Nn229s45488' => 'nnu', 'Nn229s45505' => 'nnu', 'Nn229s45511' => 'nnu', 'Nn230s45523' => 'nnu', 'Nn230s45529' => 'nnu', 'Nn230s45552' => 'nnu', 'Nn236s45567' => 'nnu', 'Nn236s45584' => 'nnu', 'Nn236s45589' => 'nnu', 'Nn237s45596' => 'nnu', 'Nn237s45619' => 'nnu', 'Nn238s45644' => 'nnu', 'Nn238s45650' => 'nnu', 'Nn240s45657' => 'nnu', 'Nn240s45663' => 'nnu', 'Nn240s45680' => 'nnu', 'Nn240s45686' => 'nnu', 'Nn242s45705' => 'nnu', 'Nn242s45711' => 'nnu', 'Nn244s45726' => 'nnu', 'Nn245s45763' => 'nnu', 'Nn246s45779' => 'nnu', 'Nn246s45786' => 'nnu', 'Nn247s45813' => 'nnu', 'Nn247s45819' => 'nnu', 'Nn250s45835' => 'nnu', 'Nn251s45872' => 'nnu', 'Nn252s45882' => 'nnu', 'Nn260s45919' => 'nnu', 'Nn260s45925' => 'nnu', 'Nn267s45961' => 'nnu', 'Nn267s45967' => 'nnu', 'Nn268s45984' => 'nnu', 'Nn268s45990' => 'nnu', 'Nn272s46016' => 'nnu', 'Nn273s46048' => 'nnu', 'Nn273s46054' => 'nnu', 'Nn275s46060' => 'nnu', 'Nn275s46066' => 'nnu', 'Nn282s46094' => 'nnu', 'Nn282s46100' => 'nnu', 'Nn284s46119' => 'nnu', 'Nn284s46125' => 'nnu', 'Nn285s46140' => 'nnu', 'Nn288s46149' => 'nnu', 'Nn288s46155' => 'nnu', 'Nn289s46178' => 'nnu', 'Nn289s46184' => 'nnu', 'Nn294s46197' => 'nnu', 'Nn294s46203' => 'nnu', 'Nn299s46224' => 'nnu', 'Nn2g14760' => 'nnu', 'Nn2g14767' => 'nnu', 'Nn306s46238' => 'nnu', 'Nn306s46244' => 'nnu', 'Nn307s46271' => 'nnu', 'Nn310s46275' => 'nnu', 'Nn310s46281' => 'nnu', 'Nn322s46334' => 'nnu', 'Nn322s46340' => 'nnu', 'Nn327s46346' => 'nnu', 'Nn327s46352' => 'nnu', 'Nn334s46385' => 'nnu', 'Nn334s46391' => 'nnu', 'Nn341s46437' => 'nnu', 'Nn344s46459' => 'nnu', 'Nn344s46465' => 'nnu', 'Nn352s46494' => 'nnu', 'Nn372s46521' => 'nnu', 'Nn376s46534' => 'nnu', 'Nn376s46540' => 'nnu', 'Nn3g16057' => 'nnu', 'Nn3g16063' => 'nnu', 'Nn3g16081' => 'nnu', 'Nn3g16092' => 'nnu', 'Nn3g16098' => 'nnu', 'Nn3g16114' => 'nnu', 'Nn3g16120' => 'nnu', 'Nn3g20481' => 'nnu', 'Nn3g20503' => 'nnu', 'Nn3g20510' => 'nnu', 'Nn3g20527' => 'nnu', 'Nn3g20547' => 'nnu', 'Nn3g20563' => 'nnu', 'Nn3g20569' => 'nnu', 'Nn3g20585' => 'nnu', 'Nn3g20599' => 'nnu', 'Nn3g20619' => 'nnu', 'Nn3g20624' => 'nnu', 'Nn3g20818' => 'nnu', 'Nn413s46591' => 'nnu', 'Nn426s46620' => 'nnu', 'Nn429s46629' => 'nnu', 'Nn432s46648' => 'nnu', 'Nn432s46650' => 'nnu', 'Nn434s46653' => 'nnu', 'Nn434s46659' => 'nnu', 'Nn435s46665' => 'nnu', 'Nn440s46682' => 'nnu', 'Nn452s46705' => 'nnu', 'Nn454s46712' => 'nnu', 'Nn4g25105' => 'nnu', 'Nn4g25111' => 'nnu', 'Nn4g25913' => 'nnu', 'Nn4g25919' => 'nnu', 'Nn4g25941' => 'nnu', 'Nn4g25947' => 'nnu', 'Nn5g26995' => 'nnu', 'Nn5g27020' => 'nnu', 'Nn5g27220' => 'nnu', 'Nn5g27296' => 'nnu', 'Nn5g27308' => 'nnu', 'Nn5g27332' => 'nnu', 'Nn5g28937' => 'nnu', 'Nn5g28943' => 'nnu', 'Nn5g29034' => 'nnu', 'Nn5g31156' => 'nnu', 'Nn5g31162' => 'nnu', 'Nn5g31178' => 'nnu', 'Nn5g31184' => 'nnu', 'Nn5g31200' => 'nnu', 'Nn5g31206' => 'nnu', 'Nn5g31220' => 'nnu', 'Nn5g31226' => 'nnu', 'Nn5g31237' => 'nnu', 'Nn5g31254' => 'nnu', 'Nn5g31295' => 'nnu', 'Nn5g31309' => 'nnu', 'Nn5g31314' => 'nnu', 'Nn5g31331' => 'nnu', 'Nn5g31336' => 'nnu', 'Nn5g31340' => 'nnu', 'Nn5g31345' => 'nnu', 'Nn5g31367' => 'nnu', 'Nn5g31390' => 'nnu', 'Nn5g31396' => 'nnu', 'Nn5g31410' => 'nnu', 'Nn5g31416' => 'nnu', 'Nn5g31432' => 'nnu', 'Nn5g31438' => 'nnu', 'Nn5g31471' => 'nnu', 'Nn6g32472' => 'nnu', 'Nn6g32478' => 'nnu', 'Nn6g32496' => 'nnu', 'Nn6g32522' => 'nnu', 'Nn6g32535' => 'nnu', 'Nn6g32541' => 'nnu', 'Nn6g32557' => 'nnu', 'Nn6g32563' => 'nnu', 'Nn6g32579' => 'nnu', 'Nn6g32585' => 'nnu', 'Nn6g32606' => 'nnu', 'Nn6g32612' => 'nnu', 'Nn6g32617' => 'nnu', 'Nn6g32639' => 'nnu', 'Nn6g32645' => 'nnu', 'Nn6g32661' => 'nnu', 'Nn6g32682' => 'nnu', 'Nn6g32688' => 'nnu', 'Nn6g32706' => 'nnu', 'Nn6g32712' => 'nnu', 'Nn6g32740' => 'nnu', 'Nn6g32787' => 'nnu', 'Nn6g32793' => 'nnu', 'Nn6g32834' => 'nnu', 'Nn6g32867' => 'nnu', 'Nn6g32873' => 'nnu', 'Nn6g32889' => 'nnu', 'Nn6g32894' => 'nnu', 'Nn6g32898' => 'nnu', 'Nn6g32903' => 'nnu', 'Nn6g32919' => 'nnu', 'Nn6g32925' => 'nnu', 'Nn6g32944' => 'nnu', 'Nn6g32960' => 'nnu', 'Nn6g32965' => 'nnu', 'Nn6g32979' => 'nnu', 'Nn6g32983' => 'nnu', 'Nn6g32998' => 'nnu', 'Nn6g33003' => 'nnu', 'Nn6g33020' => 'nnu', 'Nn6g33041' => 'nnu', 'Nn6g33046' => 'nnu', 'Nn6g33067' => 'nnu', 'Nn6g33090' => 'nnu', 'Nn6g33095' => 'nnu', 'Nn6g33118' => 'nnu', 'Nn6g33137' => 'nnu', 'Nn6g33140' => 'nnu', 'Nn6g33204' => 'nnu', 'Nn7g38455' => 'nnu', 'Nn7g38461' => 'nnu', 'Nn7g38482' => 'nnu', 'Nn7g38488' => 'nnu', 'Nn8g40322' => 'nnu', 'Nn8g40328' => 'nnu', 'Nn8g41327' => 'nnu', 'PGSC0003DMG402019042' => 'stu', 'Phvul.002G055350' => 'pvu', 'Phvul.003G090100' => 'pvu', 'Phvul.011G157400' => 'pvu', 'Potri.008G224210' => 'ptr', 'Potri.014G185588' => 'ptr', 'Potri.014G185804' => 'ptr', 'Potri.014G186452' => 'ptr', 'QL11p027314' => 'qlo', 'Sc07g0005230' => 'sci', 'ScUNg0000620' => 'sci', 'ScUNg0001590' => 'sci', 'ScUNg0001640' => 'sci', 'Sed0005859' => 'sed', 'Sed0017842' => 'sed', 'Sopen00g001850' => 'spe', 'Sopen00g002220' => 'spe', 'Sopen00g013130' => 'spe', 'Sopen07g009480' => 'spe', 'unitig_102.g31708' => 'ugi', 'unitig_102.g31721' => 'ugi', 'unitig_130.g30130' => 'ugi', 'unitig_139.g29609' => 'ugi', 'unitig_161.g31392' => 'ugi', 'unitig_172.g35454' => 'ugi', 'unitig_174.g29159' => 'ugi', 'unitig_269.g35314' => 'ugi', 'unitig_579.g34798' => 'ugi', 'unitig_579.g34807' => 'ugi', 'unitig_579.g34818' => 'ugi', 'unitig_581.g33720' => 'ugi', 'unitig_631.g33700' => 'ugi', 'unitig_670.g34683' => 'ugi', 'unitig_678.g33163' => 'ugi', 'unitig_685.g33146' => 'ugi', 'unitig_721.g34549' => 'ugi', 'unitig_783.g29408' => 'ugi', 'unitig_791.g33060' => 'ugi', 'unitig_792.g32521' => 'ugi', 'unitig_885.g34269' => 'ugi', 'unitig_892.g32991' => 'ugi', 'Zm00001eb264030' => 'zma', 'Zm00001eb440240' => 'zma', 'Zm00001eb441190' => 'zma' ) ) $data_type = 'gene_family' $gf_id = 'HOM05D001018' $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D001018' ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $subfamily_family_types = array( (int) 0 => 'ORTHOFAM' ) $parental_family_types = array( (int) 0 => 'HOMFAM' ) $gene_family_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $allowed_data_types = array( 'GO' => 'Gene Ontology', 'INTERPRO' => 'InterPro', 'GENE_FAMILY' => 'Gene Family' ) $data_identifier_value = 'HOM05D001018' $data_identifier_description = '' $adt_title = 'Gene Family' $adt = 'GENE_FAMILY' $is_selected = 'selected='selected'' $parameter = array( 'data_type' => 'GENE_FAMILY', 'data_value' => 'HOM05D001018' )include - APP/View/Tools/similarity_heatmap.ctp, line 77 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::render() - CORE/Cake/View/View.php, line 473 Controller::render() - CORE/Cake/Controller/Controller.php, line 963 Dispatcher::_invoke() - CORE/Cake/Routing/Dispatcher.php, line 200 Dispatcher::dispatch() - CORE/Cake/Routing/Dispatcher.php, line 167 [main] - APP/webroot/index.php, line 151