Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G068801 Phaseolus vulgaris HOM05D007647 ORTHO05D009644 1.2e-121 439.9 228 100.0
Glyma.08G297100 Glycine max HOM05D007647 ORTHO05D009644 3.8e-83 312.0 218 75.7
Psat0s2221g0040 Pisum sativum HOM05D007647 ORTHO05D009644 2.7e-81 305.8 223 76.7
Lj3g0001156 Lotus japonicus HOM05D007647 ORTHO05D009644 3.7e-78 295.4 201 78.6
Medtr8g468600 Medicago truncatula HOM05D007647 ORTHO05D009644 6.1e-73 278.1 205 76.1
TPR.G33269 Trifolium pratense HOM05D007647 ORTHO05D009644 1.8e-72 276.6 203 76.8
VMungo0251G0888 Vigna mungo HOM05D007647 ORTHO05D009644 1.1e-69 267.3 147 98.0
Dinv24961 Davidia involucrata HOM05D007647 ORTHO05D009644 2.0e-68 263.1 221 69.2
Thecc.02G354300 Theobroma cacao HOM05D007647 ORTHO05D009644 1.8e-64 250.0 186 75.8
COL.COLO4_23043 Corchorus olitorius HOM05D007647 ORTHO05D009644 2.3e-64 249.6 186 74.7
Duzib268G0594 Durio zibethinus HOM05D007647 ORTHO05D009644 3.3e-63 245.7 192 72.9
Ciclev10031710m.g Citrus clementina HOM05D007647 ORTHO05D009644 4.4e-63 245.4 184 72.3
arahy.Tifrunner.gnm1.ann1.G93EFL Arachis hypogaea HOM05D007647 ORTHO05D009644 2.4e-61 239.6 156 85.3
CsaV3_5G025730 Cucumis sativus L. HOM05D007647 ORTHO05D009644 5.3e-61 238.4 194 68.0
GSVIVG01020063001 Vitis vinifera HOM05D007647 ORTHO05D009644 1.2e-60 237.3 192 71.4
arahy.Tifrunner.gnm1.ann1.RD16NV Arachis hypogaea HOM05D007647 ORTHO05D009644 1.5e-60 236.9 148 87.8
CANSAT56G1214 Cannabis sativa HOM05D007647 ORTHO05D009644 5.9e-60 235.0 205 68.3
RcHm_v2.0_Chr4g0440521 Rosa chinensis HOM05D007647 ORTHO05D009644 7.7e-60 234.6 172 70.3
Actinidia08217 Actinidia chinensis HOM05D007647 ORTHO05D009644 1.0e-59 234.2 183 73.2
ClCG09G020660 Citrullus lanatus HOM05D007647 ORTHO05D009644 1.7e-59 233.4 186 67.7
MELO3C002903.2 Cucumis melo HOM05D007647 ORTHO05D009644 1.7e-59 233.4 188 69.7
TAR629G2072 Trochodendron aralioides HOM05D007647 ORTHO05D009644 3.8e-59 232.3 181 71.3
MD13G1078100 Malus domestica HOM05D007647 ORTHO05D009644 8.5e-59 231.1 191 70.2
Lalb_Chr05g0230251 Lupinus albus HOM05D007647 ORTHO05D009644 2.5e-58 229.6 149 85.9
TWI36G1390 Tripterygium wilfordii HOM05D007647 ORTHO05D009644 3.2e-58 229.2 194 67.0
Cc11_g13400 Coffea canephora HOM05D007647 ORTHO05D009644 4.2e-58 228.8 215 62.8
Atru.chr11.1897 Acer truncatum HOM05D007647 ORTHO05D009644 9.4e-58 227.6 203 65.5
CSS0041565 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 1.6e-57 226.9 190 70.0
FAN07G2131 Fragaria x ananassa HOM05D007647 ORTHO05D009644 1.6e-57 226.9 170 69.4
Manes.01G189400 Manihot esculenta HOM05D007647 ORTHO05D009644 2.7e-57 226.1 186 73.7
Prupe.1G269000 Prunus persica HOM05D007647 ORTHO05D009644 3.6e-57 225.7 196 66.8
Haze_12054 Corylus avellana HOM05D007647 ORTHO05D009644 4.7e-57 225.3 207 66.2
Gohir.A13G071900 Gossypium hirsutum HOM05D007647 ORTHO05D009644 8.0e-57 224.6 200 69.5
Sopen05g003060 Solanum pennellii HOM05D007647 ORTHO05D009644 3.9e-56 222.2 180 71.7
FAN12G1599 Fragaria x ananassa HOM05D007647 ORTHO05D009644 5.2e-56 221.9 182 64.3
FvH4_4g31851 Fragaria vesca HOM05D007647 ORTHO05D009644 6.7e-56 221.5 182 64.3
Ah.03g135420 Amaranthus hybridus HOM05D007647 ORTHO05D009644 1.5e-55 220.3 191 66.0
Sc04g0008410 Simmondsia chinensis HOM05D007647 ORTHO05D009644 9.7e-55 217.6 167 65.3
AUR62005734 Chenopodium quinoa HOM05D007647 ORTHO05D009644 1.3e-54 217.2 200 64.5
Gohir.D13G068000 Gossypium hirsutum HOM05D007647 ORTHO05D009644 1.3e-54 217.2 201 61.2
Gorai.013G077500 Gossypium raimondii HOM05D007647 ORTHO05D009644 1.3e-54 217.2 148 82.4
Peaxi162Scf00209g00222 Petunia axillaris HOM05D007647 ORTHO05D009644 2.8e-54 216.1 202 65.3
Eucgr.L01756 Eucalyptus grandis HOM05D007647 ORTHO05D009644 3.7e-54 215.7 158 74.7
AUR62028827 Chenopodium quinoa HOM05D007647 ORTHO05D009644 6.3e-54 214.9 181 68.0
Migut.L01334 Erythranthe guttata HOM05D007647 ORTHO05D009644 8.2e-54 214.5 190 64.2
PGR119G2388 Punica granatum HOM05D007647 ORTHO05D009644 1.1e-53 214.2 160 77.5
PGSC0003DMG400017644 Solanum tuberosum HOM05D007647 ORTHO05D009644 1.1e-53 214.2 175 72.0
Lsat_1_v5_gn_4_8860 Lactuca sativa HOM05D007647 ORTHO05D009644 1.4e-53 213.8 194 63.9
Eucgr.L00644 Eucalyptus grandis HOM05D007647 ORTHO05D009644 1.8e-53 213.4 157 75.2
Nitab4.5_0010498g0040 Nicotiana tabacum HOM05D007647 ORTHO05D009644 3.1e-53 212.6 204 66.2
CAN.G279.15 Capsicum annuum HOM05D007647 ORTHO05D009644 4.1e-53 212.2 166 74.1
HanXRQChr17g0570511 Helianthus annuus HOM05D007647 ORTHO05D009644 5.3e-53 211.8 212 61.8
Solyc05g007090.4 Solanum lycopersicum HOM05D007647 ORTHO05D009644 7.0e-53 211.5 175 71.4
MBI04_g10401_MAGBIO Magnolia biondii HOM05D007647 ORTHO05D009644 2.6e-52 209.5 145 79.3
Nn4g23062 Nelumbo nucifera HOM05D007647 ORTHO05D009644 2.6e-52 209.5 148 78.4
PSO591G0056 Papaver somniferum HOM05D007647 ORTHO05D009644 2.6e-52 209.5 201 58.2
PSO832G4528 Papaver somniferum HOM05D007647 ORTHO05D009644 2.6e-52 209.5 145 78.6
Hund05905 Selenicereus undatus HOM05D007647 ORTHO05D009644 2.6e-52 209.5 165 63.6
EL10Ac7g17383 Beta vulgaris HOM05D007647 ORTHO05D009644 4.5e-52 208.8 154 73.4
Aqoxy3G03286 Aquilegia oxysepala HOM05D007647 ORTHO05D009644 5.9e-52 208.4 162 70.4
Sed0021599 Sechium edule HOM05D007647 ORTHO05D009644 1.3e-51 207.2 202 60.9
ECA234G4198 Erigeron canadensis HOM05D007647 ORTHO05D009644 1.7e-51 206.8 179 67.6
CiPaw.06G081300 Carya illinoinensis HOM05D007647 ORTHO05D009644 2.2e-51 206.5 199 62.3
Cfa009023 Carpinus fangiana HOM05D007647 ORTHO05D009644 2.9e-51 206.1 147 78.9
BolC9t58468H Brassica oleracea HOM05D007647 ORTHO05D009644 2.1e-49 199.9 203 59.1
AL6G31770 Arabidopsis lyrata HOM05D007647 ORTHO05D009644 4.7e-49 198.7 201 61.2
C09p56010 Brassica napus HOM05D007647 ORTHO05D009644 6.1e-49 198.4 183 63.9
Thhalv10013726m.g Eutrema salsugineum HOM05D007647 ORTHO05D009644 6.1e-49 198.4 203 60.6
Aa31LG1G14410 Aethionema arabicum HOM05D007647 ORTHO05D009644 1.0e-48 197.6 202 61.4
BraA10t44047Z Brassica rapa HOM05D007647 ORTHO05D009644 1.8e-48 196.8 183 62.8
A10p19720 Brassica napus HOM05D007647 ORTHO05D009644 2.3e-48 196.4 183 63.4
Sp6g24190 Schrenkiella parvula HOM05D007647 ORTHO05D009644 4.0e-48 195.7 203 59.6
CARHR192610 Cardamine hirsuta HOM05D007647 ORTHO05D009644 6.8e-48 194.9 190 63.2
Rhsim12G0058000 Rhododendron simsii HOM05D007647 ORTHO05D009644 7.5e-47 191.4 122 86.1
AT5G20220 Arabidopsis thaliana HOM05D007647 ORTHO05D009644 1.3e-46 190.7 148 72.3
Potri.010G092600 Populus trichocarpa HOM05D007647 ORTHO05D009644 1.7e-46 190.3 157 72.6
Carub.0006s1861 Capsella rubella HOM05D007647 ORTHO05D009644 3.7e-46 189.1 147 73.5
Lj6A793T94 Lonicera japonica HOM05D007647 ORTHO05D009644 1.8e-45 186.8 125 84.0
ATR1120G132 Amborella trichopoda HOM05D007647 ORTHO05D009644 1.0e-43 181.0 149 72.5
Sabra10G0051000 Salix brachista HOM05D007647 ORTHO05D009644 2.2e-43 179.9 125 84.0
vmacro01233 Vaccinium macrocarpon HOM05D007647 ORTHO05D009644 2.2e-43 179.9 123 79.7
CDE06G0855 Ceratophyllum demersum HOM05D007647 ORTHO05D009644 8.0e-41 171.4 140 63.6
SEGI_16248 Sequoiadendron giganteum HOM05D007647 ORTHO05D009644 1.4e-40 170.6 155 61.9
HPP92_007641 Vanilla planifolia HOM05D007647 ORTHO05D009644 4.9e-38 162.2 142 64.8
Zm00001eb361470 Zea mays HOM05D007647 ORTHO05D009644 5.0e-35 152.1 150 62.7
AagrBONN_evm.TU.Sc2ySwM_344.2050 Anthoceros agrestis HOM05D007647 ORTHO05D009644 1.3e-30 137.5 152 53.9
CSS0049134 Camellia sinensis var. sinensis HOM05D007647 ORTHO05D009644 8.9e-24 114.8 74 89.2
QL03p065502 Quercus lobata HOM05D007647 ORTHO05D009644 4.1e-21 105.9 65 83.1
SGA_v2.0_scaffold46G17448 Striga asiatica HOM05D007647 ORTHO05D009644 3.9e-19 99.4 66 72.7
Cpa.g.sc1007.5 Carica papaya HOM05D007647 ORTHO05D009644 3.9e-11 72.8 167 32.9
Pp3c16_24380 Physcomitrium patens HOM05D007647 ORTHO05D009644 1.2e-09 67.8 161 28.6
Nitab4.5_0000879g0070 Nicotiana tabacum HOM05D007647 ORTHO05D009644 5.2e-08 62.4 41 78.0


User provided reference genes

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