Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G068200 Phaseolus vulgaris HOM05D001783 ORTHO05D005379 2.3e-84 315.5 153 100.0
Phvul.002G004800 Phaseolus vulgaris HOM05D001783 ORTHO05D005379 4.5e-56 221.5 123 89.4
VMungo1215G0556 Vigna mungo HOM05D001783 ORTHO05D005379 1.2e-51 206.8 127 81.1
Phvul.005G092900 Phaseolus vulgaris HOM05D001783 ORTHO05D005379 1.6e-45 186.4 110 85.5
Glyma.01G200800 Glycine max HOM05D001783 ORTHO05D005379 2.7e-45 185.7 127 76.4
Glyma.11G041300 Glycine max HOM05D001783 ORTHO05D005379 4.7e-45 184.9 127 76.4
Lj2g0001410 Lotus japonicus HOM05D001783 ORTHO05D005379 3.3e-38 162.2 127 69.3
Psat2g174400 Pisum sativum HOM05D001783 ORTHO05D005379 4.9e-34 148.3 128 63.3
TPR.G27537 Trifolium pratense HOM05D001783 ORTHO05D005379 2.4e-33 146.0 129 63.6
arahy.Tifrunner.gnm1.ann1.F8U6QL Arachis hypogaea HOM05D001783 ORTHO05D005379 6.6e-31 137.9 131 61.8
arahy.Tifrunner.gnm1.ann1.LEG0TK Arachis hypogaea HOM05D001783 ORTHO05D005379 6.6e-31 137.9 131 61.8
Medtr5g014040 Medicago truncatula HOM05D001783 ORTHO05D005379 1.9e-30 136.3 128 61.7
Lalb_Chr09g0323931 Lupinus albus HOM05D001783 ORTHO05D005379 9.5e-30 134.0 127 58.3
Ca_24635_v3 Cicer arietinum L. HOM05D001783 ORTHO05D005379 2.8e-29 132.5 115 67.0
Ca_22046_v3 Cicer arietinum L. HOM05D001783 ORTHO05D005379 6.2e-29 131.3 128 55.5
Lalb_Chr05g0214071 Lupinus albus HOM05D001783 ORTHO05D005379 6.2e-29 131.3 128 57.8
TPR.G19197 Trifolium pratense HOM05D001783 ORTHO05D005379 1.0e-28 130.6 129 55.8
Lalb_Chr05g0220661 Lupinus albus HOM05D001783 ORTHO05D005379 4.0e-28 128.6 139 54.0
Glyma.17G152800 Glycine max HOM05D001783 ORTHO05D005379 6.8e-28 127.9 135 53.3
Medtr4g098870 Medicago truncatula HOM05D001783 ORTHO05D005379 6.8e-28 127.9 129 57.4
Lj4g0007873 Lotus japonicus HOM05D001783 ORTHO05D005379 2.6e-27 125.9 127 58.3
Lalb_Chr16g0379201 Lupinus albus HOM05D001783 ORTHO05D005379 4.4e-27 125.2 128 56.2
Lalb_Chr16g0386131 Lupinus albus HOM05D001783 ORTHO05D005379 3.7e-26 122.1 140 53.6
Phvul.003G228600 Phaseolus vulgaris HOM05D001783 ORTHO05D005379 6.4e-26 121.3 131 56.5
VMungo0251G1596 Vigna mungo HOM05D001783 ORTHO05D005379 1.1e-25 120.6 132 53.8
Haze_08293 Corylus avellana HOM05D001783 ORTHO05D005379 6.0e-24 114.8 123 52.8
Glyma.05G070200 Glycine max HOM05D001783 ORTHO05D005379 7.3e-22 107.8 153 45.1
QL12p006931 Quercus lobata HOM05D001783 ORTHO05D005379 1.1e-20 104.0 121 52.1
Dinv28920 Davidia involucrata HOM05D001783 ORTHO05D005379 1.8e-20 103.2 139 45.3
Manes.17G019500 Manihot esculenta HOM05D001783 ORTHO05D005379 1.8e-20 103.2 141 48.2
Nitab4.5_0004327g0030 Nicotiana tabacum HOM05D001783 ORTHO05D005379 1.8e-20 103.2 130 43.8
GSVIVG01013234001 Vitis vinifera HOM05D001783 ORTHO05D005379 1.8e-20 103.2 144 46.5
CANSAT21G2302 Cannabis sativa HOM05D001783 ORTHO05D005379 5.2e-20 101.7 125 50.4
CiPaw.11G088000 Carya illinoinensis HOM05D001783 ORTHO05D005379 6.8e-20 101.3 121 50.4
Ciclev10031120m.g Citrus clementina HOM05D001783 ORTHO05D005379 1.5e-19 100.1 136 46.3
Manes.15G173500 Manihot esculenta HOM05D001783 ORTHO05D005379 2.0e-19 99.8 131 50.4
Psat4g078160 Pisum sativum HOM05D001783 ORTHO05D005379 4.4e-19 98.6 77 67.5
arahy.Tifrunner.gnm1.ann1.D788HE Arachis hypogaea HOM05D001783 ORTHO05D005379 1.7e-18 96.7 126 46.8
RcHm_v2.0_Chr7g0208371 Rosa chinensis HOM05D001783 ORTHO05D005379 1.7e-18 96.7 108 50.0
arahy.Tifrunner.gnm1.ann1.UB10Y8 Arachis hypogaea HOM05D001783 ORTHO05D005379 2.2e-18 96.3 126 46.8
Eucgr.E00308 Eucalyptus grandis HOM05D001783 ORTHO05D005379 2.9e-18 95.9 113 46.9
Nitab4.5_0002055g0150 Nicotiana tabacum HOM05D001783 ORTHO05D005379 6.4e-18 94.7 129 41.1
COL.COLO4_17105 Corchorus olitorius HOM05D001783 ORTHO05D005379 8.3e-18 94.4 139 44.6
MD06G1039500 Malus domestica HOM05D001783 ORTHO05D005379 8.3e-18 94.4 116 49.1
Prupe.5G045000 Prunus persica HOM05D001783 ORTHO05D005379 1.9e-17 93.2 104 52.9
Sabra01G0115000 Salix brachista HOM05D001783 ORTHO05D005379 1.9e-17 93.2 136 44.9
Sopen08g025810 Solanum pennellii HOM05D001783 ORTHO05D005379 2.4e-17 92.8 126 40.5
Duzib205G1207 Durio zibethinus HOM05D001783 ORTHO05D005379 3.2e-17 92.4 136 46.3
FvH4_5g21280 Fragaria vesca HOM05D001783 ORTHO05D005379 3.2e-17 92.4 104 51.9
FAN13G0588 Fragaria x ananassa HOM05D001783 ORTHO05D005379 3.2e-17 92.4 104 51.9
Solyc08g077230.3 Solanum lycopersicum HOM05D001783 ORTHO05D005379 3.2e-17 92.4 126 39.7
FAN08G0643 Fragaria x ananassa HOM05D001783 ORTHO05D005379 9.2e-17 90.9 104 51.0
Peaxi162Scf00312g00089 Petunia axillaris HOM05D001783 ORTHO05D005379 9.2e-17 90.9 137 38.7
TAR636G1186 Trochodendron aralioides HOM05D001783 ORTHO05D005379 9.2e-17 90.9 142 42.3
TAR629G3324 Trochodendron aralioides HOM05D001783 ORTHO05D005379 1.6e-16 90.1 141 45.4
FAN18G1055 Fragaria x ananassa HOM05D001783 ORTHO05D005379 2.1e-16 89.7 104 51.0
CSS0037714 Camellia sinensis var. sinensis HOM05D001783 ORTHO05D005379 3.5e-16 89.0 103 47.6
Lj2C245G6 Lonicera japonica HOM05D001783 ORTHO05D005379 3.5e-16 89.0 122 46.7
Potri.001G146200 Populus trichocarpa HOM05D001783 ORTHO05D005379 6.0e-16 88.2 116 46.6
Rhsim11G0011500 Rhododendron simsii HOM05D001783 ORTHO05D005379 6.0e-16 88.2 114 43.9
Thecc.03G233600 Theobroma cacao HOM05D001783 ORTHO05D005379 6.0e-16 88.2 110 52.7
FAN04G0921 Fragaria x ananassa HOM05D001783 ORTHO05D005379 1.0e-15 87.4 104 50.0
Cpa.g.sc6.428 Carica papaya HOM05D001783 ORTHO05D005379 1.3e-15 87.0 139 40.3
Gohir.A08G159400 Gossypium hirsutum HOM05D001783 ORTHO05D005379 1.3e-15 87.0 144 43.1
Actinidia25946 Actinidia chinensis HOM05D001783 ORTHO05D005379 1.7e-15 86.7 145 39.3
PGSC0003DMG400024217 Solanum tuberosum HOM05D001783 ORTHO05D005379 2.3e-15 86.3 126 38.9
MD16G1269900 Malus domestica HOM05D001783 ORTHO05D005379 3.0e-15 85.9 116 46.6
Cc08_g02100 Coffea canephora HOM05D001783 ORTHO05D005379 3.9e-15 85.5 130 41.5
CAN.G799.11 Capsicum annuum HOM05D001783 ORTHO05D005379 5.1e-15 85.1 91 52.7
Duzib084G1148 Durio zibethinus HOM05D001783 ORTHO05D005379 5.1e-15 85.1 102 51.0
Gohir.D08G179832 Gossypium hirsutum HOM05D001783 ORTHO05D005379 5.1e-15 85.1 143 42.0
vmacro00350 Vaccinium macrocarpon HOM05D001783 ORTHO05D005379 5.1e-15 85.1 114 42.1
ClCG10G001890 Citrullus lanatus HOM05D001783 ORTHO05D005379 1.1e-14 84.0 112 46.4
Gorai.004G188300 Gossypium raimondii HOM05D001783 ORTHO05D005379 1.1e-14 84.0 143 42.0
Gohir.A03G002500 Gossypium hirsutum HOM05D001783 ORTHO05D005379 1.5e-14 83.6 98 51.0
Potri.003G087700 Populus trichocarpa HOM05D001783 ORTHO05D005379 1.5e-14 83.6 128 45.3
CsaV3_3G002030 Cucumis sativus L. HOM05D001783 ORTHO05D005379 3.3e-14 82.4 134 40.3
TWI15G0295 Tripterygium wilfordii HOM05D001783 ORTHO05D005379 3.3e-14 82.4 138 41.3
MELO3C013874.2 Cucumis melo HOM05D001783 ORTHO05D005379 4.3e-14 82.0 135 40.0
Duzib068G0312 Durio zibethinus HOM05D001783 ORTHO05D005379 4.3e-14 82.0 136 40.4
TAR375G0005 Trochodendron aralioides HOM05D001783 ORTHO05D005379 4.3e-14 82.0 115 43.5
Gorai.003G180100 Gossypium raimondii HOM05D001783 ORTHO05D005379 5.6e-14 81.6 98 50.0
Sed0011482 Sechium edule HOM05D001783 ORTHO05D005379 7.3e-14 81.3 135 40.7
Hund11268 Selenicereus undatus HOM05D001783 ORTHO05D005379 7.3e-14 81.3 110 41.8
Gohir.A12G210500 Gossypium hirsutum HOM05D001783 ORTHO05D005379 1.2e-13 80.5 93 48.4
Oeu028033.3 Olea europaea HOM05D001783 ORTHO05D005379 2.8e-13 79.3 147 39.5
Gohir.D03G169800 Gossypium hirsutum HOM05D001783 ORTHO05D005379 4.7e-13 78.6 98 49.0
Hma1.2p1_0414F.1_g147780 Hydrangea macrophylla HOM05D001783 ORTHO05D005379 4.7e-13 78.6 139 41.7
Gohir.D12G213200 Gossypium hirsutum HOM05D001783 ORTHO05D005379 6.2e-13 78.2 91 47.3
Gorai.008G228800 Gossypium raimondii HOM05D001783 ORTHO05D005379 6.2e-13 78.2 91 47.3
Nitab4.5_0004658g0020 Nicotiana tabacum HOM05D001783 ORTHO05D005379 6.2e-13 78.2 121 39.7
Atru.chr6.1768 Acer truncatum HOM05D001783 ORTHO05D005379 8.1e-13 77.8 158 35.4
Peaxi162Scf00497g00086 Petunia axillaris HOM05D001783 ORTHO05D005379 1.4e-12 77.0 93 47.3
Nitab4.5_0003100g0090 Nicotiana tabacum HOM05D001783 ORTHO05D005379 5.2e-12 75.1 87 48.3
Nn6g33664 Nelumbo nucifera HOM05D001783 ORTHO05D005379 6.8e-12 74.7 105 46.7
PGSC0003DMG400026587 Solanum tuberosum HOM05D001783 ORTHO05D005379 1.5e-11 73.6 151 34.4
Aqoxy3G02502 Aquilegia oxysepala HOM05D001783 ORTHO05D005379 3.4e-11 72.4 117 38.5
CAN.G201.10 Capsicum annuum HOM05D001783 ORTHO05D005379 1.3e-10 70.5 143 35.7
TWI60G0553 Tripterygium wilfordii HOM05D001783 ORTHO05D005379 1.3e-10 70.5 140 39.3
PSO782G0165 Papaver somniferum HOM05D001783 ORTHO05D005379 1.7e-10 70.1 120 35.8
Sabra03G0057600 Salix brachista HOM05D001783 ORTHO05D005379 2.2e-10 69.7 128 40.6
ECA233G0090 Erigeron canadensis HOM05D001783 ORTHO05D005379 2.9e-10 69.3 63 55.6
Actinidia10882 Actinidia chinensis HOM05D001783 ORTHO05D005379 4.9e-10 68.6 135 38.5
DCAR_008297 Daucus carota HOM05D001783 ORTHO05D005379 4.9e-10 68.6 155 35.5
TWI81G0709 Tripterygium wilfordii HOM05D001783 ORTHO05D005379 4.9e-10 68.6 131 39.7
HanXRQChr16g0511501 Helianthus annuus HOM05D001783 ORTHO05D005379 1.9e-09 66.6 59 57.6
EL10Ac5g12185 Beta vulgaris HOM05D001783 ORTHO05D005379 4.1e-09 65.5 135 39.3
PSO063G2488 Papaver somniferum HOM05D001783 ORTHO05D005379 4.1e-09 65.5 120 34.2
Solyc06g061030.3 Solanum lycopersicum HOM05D001783 ORTHO05D005379 9.2e-09 64.3 127 38.6
Sopen06g021230 Solanum pennellii HOM05D001783 ORTHO05D005379 1.2e-08 63.9 125 39.2
PGR042G2029 Punica granatum HOM05D001783 ORTHO05D005379 6.0e-08 61.6 84 47.6
Hund14426 Selenicereus undatus HOM05D001783 ORTHO05D005379 7.8e-08 61.2 89 42.7
Nn1g00605 Nelumbo nucifera HOM05D001783 ORTHO05D005379 1.3e-07 60.5 134 32.8
MBI04_g31971_MAGBIO Magnolia biondii HOM05D001783 ORTHO05D005379 1.7e-07 60.1 99 41.4
Lsat_1_v5_gn_6_66681 Lactuca sativa HOM05D001783 ORTHO05D005379 3.0e-07 59.3 51 60.8
AUR62018764 Chenopodium quinoa HOM05D001783 ORTHO05D005379 3.9e-07 58.9 103 38.8
AUR62007236 Chenopodium quinoa HOM05D001783 ORTHO05D005379 3.3e-06 55.8 103 38.8


User provided reference genes

Program Settings