Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G059200 Phaseolus vulgaris HOM05D013640 ORTHO05D014229 6.9e-212 740.3 365 100.0
VMungo0251G1126 Vigna mungo HOM05D013640 ORTHO05D014229 3.2e-156 555.4 375 74.4
VMungo0251G2386 Vigna mungo HOM05D013640 ORTHO05D014229 1.1e-103 380.9 383 52.5
Glyma.02G139432 Glycine max HOM05D013640 ORTHO05D014229 2.1e-67 260.4 414 41.8
Glyma.02G139300 Glycine max HOM05D013640 ORTHO05D014229 3.6e-67 259.6 442 38.9
Glyma.02G139200 Glycine max HOM05D013640 ORTHO05D014229 2.2e-61 240.4 471 36.5
Glyma.02G139366 Glycine max HOM05D013640 ORTHO05D014229 2.0e-57 227.3 424 38.0
Glyma.17G171600 Glycine max HOM05D013640 ORTHO05D014229 8.0e-51 205.3 196 51.5
Phvul.003G059300 Phaseolus vulgaris HOM05D013640 ORTHO05D014229 4.4e-49 199.5 431 33.6
VMungo0464G0392 Vigna mungo HOM05D006224 ORTHO05D007691 2.2e-40 170.6 258 39.9
Glyma.20G031800 Glycine max HOM05D002984 ORTHO05D014229 3.2e-39 166.8 274 38.7
Phvul.004G160600 Phaseolus vulgaris HOM05D002984 ORTHO05D014229 1.2e-33 148.3 215 39.5
Glyma.07G206066 Glycine max HOM05D013640 ORTHO05D014229 1.5e-28 131.3 154 44.8
VMungo0464G0094 Vigna mungo HOM05D002984 ORTHO05D014229 4.3e-28 129.8 290 33.8
Psat1g039440 Pisum sativum HOM05D002984 ORTHO05D022868 3.1e-26 123.6 133 43.6
Lalb_Chr14g0371321 Lupinus albus HOM05D002984 ORTHO05D003561 1.2e-25 121.7 135 40.7
Medtr6g085130 Medicago truncatula HOM05D002984 ORTHO05D022868 6.4e-24 115.9 222 35.1
Phvul.004G160500 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 1.2e-22 111.7 210 34.8
Lj2g0016414 Lotus japonicus HOM05D002984 ORTHO05D022868 1.6e-22 111.3 135 44.4
Medtr6g085080 Medicago truncatula HOM05D002984 ORTHO05D022868 4.6e-22 109.8 201 34.8
Medtr6g085100 Medicago truncatula HOM05D002984 ORTHO05D022868 6.0e-22 109.4 134 38.8
arahy.Tifrunner.gnm1.ann1.48S2GI Arachis hypogaea HOM05D002984 ORTHO05D003561 8.6e-21 105.5 214 35.5
arahy.Tifrunner.gnm1.ann1.53ZNG0 Arachis hypogaea HOM05D002984 ORTHO05D003561 1.1e-20 105.1 214 34.6
VMungo0464G1061 Vigna mungo HOM05D002984 ORTHO05D003561 9.6e-12 75.5 191 33.0
Mapoly0022s0114 Marchantia polymorpha HOM05D002984 ORTHO05D003561 1.6e-11 74.7 142 32.4
Sopen12g027160 Solanum pennellii HOM05D002984 ORTHO05D003561 6.2e-11 72.8 276 24.3
Medtr5g054690 Medicago truncatula HOM05D002984 ORTHO05D003561 1.4e-10 71.6 143 28.7
Sc04g0003680 Simmondsia chinensis HOM05D002984 ORTHO05D003561 4.0e-10 70.1 117 34.2
PSO478G2088 Papaver somniferum HOM05D002984 ORTHO05D003561 5.2e-10 69.7 183 25.1
CAN.G2.31 Capsicum annuum HOM05D002984 ORTHO05D003561 8.9e-10 68.9 271 24.7
Lalb_Chr11g0074751 Lupinus albus HOM05D013640 ORTHO05D014229 8.9e-10 68.9 62 43.5
SMO118G0238 Selaginella moellendorffii HOM05D002984 ORTHO05D003561 1.2e-09 68.6 153 28.1
PSO017G4771 Papaver somniferum HOM05D002984 ORTHO05D003561 2.6e-09 67.4 183 24.6
SGA_v2.0_scaffold124G33581 Striga asiatica HOM05D002984 ORTHO05D003561 2.6e-09 67.4 125 28.8
Migut.E00313 Erythranthe guttata HOM05D002984 ORTHO05D003561 3.4e-09 67.0 125 28.8
QL10p023587 Quercus lobata HOM05D002984 ORTHO05D014229 3.4e-09 67.0 87 37.9
FvH4_5g01900 Fragaria vesca HOM05D002984 ORTHO05D003561 5.8e-09 66.2 189 27.5
PSO017G3087 Papaver somniferum HOM05D002984 ORTHO05D003561 5.8e-09 66.2 158 24.7
Phvul.003G028300 Phaseolus vulgaris HOM05D002984 ORTHO05D003561 7.6e-09 65.9 246 23.6
Solyc12g070100.2 Solanum lycopersicum HOM05D002984 ORTHO05D003561 7.6e-09 65.9 205 26.3
Nn4g23754 Nelumbo nucifera HOM05D002984 ORTHO05D003561 9.9e-09 65.5 125 28.8
FvH4_4g27961 Fragaria vesca HOM05D002984 ORTHO05D003561 1.3e-08 65.1 298 24.8
Atru.chr11.1338 Acer truncatum HOM05D002984 ORTHO05D003561 1.7e-08 64.7 284 23.6
CANSAT64G2157 Cannabis sativa HOM05D002984 ORTHO05D003561 1.7e-08 64.7 246 24.8
DCAR_026720 Daucus carota HOM05D002984 ORTHO05D003561 1.7e-08 64.7 255 23.5
Gohir.A03G097900 Gossypium hirsutum HOM05D002984 ORTHO05D003561 1.7e-08 64.7 277 23.5
MD16G1047200 Malus domestica HOM05D002984 ORTHO05D003561 1.7e-08 64.7 275 23.6
PGR142G0084 Punica granatum HOM05D002984 ORTHO05D003561 1.7e-08 64.7 125 27.2
Os09g0306700 Oryza sativa ssp. japonica HOM05D002984 ORTHO05D003561 2.2e-08 64.3 279 25.1
HPP92_024319 Vanilla planifolia HOM05D002984 ORTHO05D003561 2.2e-08 64.3 125 28.0
CSS0023076 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 2.9e-08 63.9 237 24.9
CSS0024955 Camellia sinensis var. sinensis HOM05D002984 ORTHO05D003561 2.9e-08 63.9 125 30.4
Gohir.D02G115800 Gossypium hirsutum HOM05D002984 ORTHO05D003561 2.9e-08 63.9 277 23.5
Gorai.005G138200 Gossypium raimondii HOM05D002984 ORTHO05D003561 2.9e-08 63.9 277 23.5
PGR142G1725 Punica granatum HOM05D002984 ORTHO05D003561 2.9e-08 63.9 143 26.6
Cc11_g10490 Coffea canephora HOM05D002984 ORTHO05D003561 3.8e-08 63.5 125 28.0
Duzib251G0734 Durio zibethinus HOM05D002984 ORTHO05D003561 3.8e-08 63.5 277 22.7
HanXRQChr16g0529571 Helianthus annuus HOM05D002984 ORTHO05D003561 3.8e-08 63.5 125 28.0
Manes.14G098600 Manihot esculenta HOM05D002984 ORTHO05D003561 3.8e-08 63.5 272 25.0
Potri.008G117700 Populus trichocarpa HOM05D002984 ORTHO05D003561 3.8e-08 63.5 125 28.0
Potri.010G128600 Populus trichocarpa HOM05D002984 ORTHO05D003561 3.8e-08 63.5 125 28.0
EL10Ac3g05929 Beta vulgaris HOM05D002984 ORTHO05D003561 4.9e-08 63.2 125 28.0
Carub.0001s2494 Capsella rubella HOM05D002984 ORTHO05D003561 4.9e-08 63.2 143 26.6
Hma1.2p1_0030F.1_g018360 Hydrangea macrophylla HOM05D002984 ORTHO05D003561 4.9e-08 63.2 125 27.2
SEGI_39328 Sequoiadendron giganteum HOM05D002984 ORTHO05D003561 4.9e-08 63.2 121 29.8
THA.LOC104808226 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 4.9e-08 63.2 352 20.7
BcaB03g12090 Brassica carinata HOM05D002984 ORTHO05D003561 6.4e-08 62.8 194 25.3
QL01p044747 Quercus lobata HOM05D002984 ORTHO05D003561 6.4e-08 62.8 260 23.5
BcaC01g01711 Brassica carinata HOM05D002984 ORTHO05D003561 8.4e-08 62.4 125 28.0
A08p27060 Brassica napus HOM05D002984 ORTHO05D003561 8.4e-08 62.4 125 28.0
C03p72840 Brassica napus HOM05D002984 ORTHO05D003561 8.4e-08 62.4 125 28.0
RcHm_v2.0_Chr4g0435671 Rosa chinensis HOM05D002984 ORTHO05D003561 8.4e-08 62.4 368 23.1
CiPaw.16G003700 Carya illinoinensis HOM05D002984 ORTHO05D003561 1.1e-07 62.0 281 22.4
ECA234G4415 Erigeron canadensis HOM05D002984 ORTHO05D003561 1.1e-07 62.0 125 27.2
Lsat_1_v5_gn_4_19001 Lactuca sativa HOM05D002984 ORTHO05D003561 1.1e-07 62.0 125 27.2
Medtr1g013000 Medicago truncatula HOM05D002984 ORTHO05D003561 1.1e-07 62.0 142 26.1
Sabra10G0097800 Salix brachista HOM05D002984 ORTHO05D003561 1.1e-07 62.0 276 24.6
GSVIVG01011939001 Vitis vinifera HOM05D002984 ORTHO05D003561 1.1e-07 62.0 289 22.1
Atru.chr11.1335 Acer truncatum HOM05D002984 ORTHO05D003561 1.4e-07 61.6 284 23.6
Aqoxy3G00352 Aquilegia oxysepala HOM05D002984 ORTHO05D003561 1.4e-07 61.6 255 22.7
Ca_19808_v3 Cicer arietinum L. HOM05D002984 ORTHO05D003561 1.4e-07 61.6 125 26.4
Lalb_Chr10g0099841 Lupinus albus HOM05D002984 ORTHO05D003561 1.4e-07 61.6 121 27.3
Medtr5g054680 Medicago truncatula HOM05D002984 ORTHO05D003561 1.4e-07 61.6 125 26.4
Prupe.1G306600 Prunus persica HOM05D002984 ORTHO05D003561 1.4e-07 61.6 274 23.0
TWI79G1384 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 1.4e-07 61.6 125 26.4
Actinidia14860 Actinidia chinensis HOM05D002984 ORTHO05D003561 1.9e-07 61.2 293 22.5
A09p39560 Brassica napus HOM05D002984 ORTHO05D003561 1.9e-07 61.2 271 23.6
BraA09t39454Z Brassica rapa HOM05D002984 ORTHO05D003561 1.9e-07 61.2 271 23.6
Thhalv10006778m.g Eutrema salsugineum HOM05D002984 ORTHO05D003561 1.9e-07 61.2 143 25.9
FAN22G1846 Fragaria x ananassa HOM05D002984 ORTHO05D003561 1.9e-07 61.2 298 25.2
AL1G39760 Arabidopsis lyrata HOM05D002984 ORTHO05D003561 2.4e-07 60.8 143 25.9
AT1G25540 Arabidopsis thaliana HOM05D002984 ORTHO05D003561 2.4e-07 60.8 143 25.9
Cpa.g.sc1.211 Carica papaya HOM05D002984 ORTHO05D003561 2.4e-07 60.8 276 23.6
Oeu010774.1 Olea europaea HOM05D002984 ORTHO05D003561 2.4e-07 60.8 284 23.9
Aa31LG7G8960 Aethionema arabicum HOM05D002984 ORTHO05D003561 4.2e-07 60.1 195 26.7
CiPaw.16G003900 Carya illinoinensis HOM05D002984 ORTHO05D003561 4.2e-07 60.1 282 22.3
Ciclev10030710m.g Citrus clementina HOM05D002984 ORTHO05D003561 4.2e-07 60.1 275 23.6
Glyma.02G098300 Glycine max HOM05D002984 ORTHO05D003561 4.2e-07 60.1 272 22.8
TPR.G38317 Trifolium pratense HOM05D002984 ORTHO05D003561 4.2e-07 60.1 125 25.6
arahy.Tifrunner.gnm1.ann1.IQF6NS Arachis hypogaea HOM05D002984 ORTHO05D003561 5.4e-07 59.7 280 23.2
Haze_17450 Corylus avellana HOM05D002984 ORTHO05D003561 5.4e-07 59.7 117 29.1
Sabra08G0089300 Salix brachista HOM05D002984 ORTHO05D003561 5.4e-07 59.7 117 27.4
Glyma.01G086201 Glycine max HOM05D002984 ORTHO05D003561 7.1e-07 59.3 272 22.8
Pp3c25_2660 Physcomitrium patens HOM05D002984 ORTHO05D003561 7.1e-07 59.3 121 29.8
arahy.Tifrunner.gnm1.ann1.X8TPQJ Arachis hypogaea HOM05D002984 ORTHO05D003561 9.3e-07 58.9 280 23.2
CARHR025920 Cardamine hirsuta HOM05D002984 ORTHO05D003561 9.3e-07 58.9 125 26.4
Lj6A762T42 Lonicera japonica HOM05D002984 ORTHO05D003561 9.3e-07 58.9 117 28.2
Lj6C764G13 Lonicera japonica HOM05D002984 ORTHO05D003561 9.3e-07 58.9 117 28.2
Lalb_Chr17g0341951 Lupinus albus HOM05D002984 ORTHO05D003561 9.3e-07 58.9 262 22.1
Sp1g22670 Schrenkiella parvula HOM05D002984 ORTHO05D003561 9.3e-07 58.9 125 26.4
Zm00001eb097890 Zea mays HOM05D002984 ORTHO05D003561 9.3e-07 58.9 264 22.7
FvH4_6g01630 Fragaria vesca HOM05D002984 ORTHO05D003561 1.2e-06 58.5 257 25.3
Thecc.02G359700 Theobroma cacao HOM05D002984 ORTHO05D003561 1.2e-06 58.5 277 22.4
BcaC05g26443 Brassica carinata HOM05D002984 ORTHO05D003561 1.6e-06 58.2 143 25.2
BolC5t31221H Brassica oleracea HOM05D002984 ORTHO05D003561 1.6e-06 58.2 143 25.2
THA.LOC104821957 Tarenaya hassleriana HOM05D002984 ORTHO05D003561 1.6e-06 58.2 203 24.6
MBI01_g09372_MAGBIO Magnolia biondii HOM05D002984 ORTHO05D003561 2.1e-06 57.8 279 22.2
MD16G1046800 Malus domestica HOM05D002984 ORTHO05D003561 2.1e-06 57.8 257 23.7
Sed0009737 Sechium edule HOM05D002984 ORTHO05D003561 2.7e-06 57.4 266 23.7
AUR62015392 Chenopodium quinoa HOM05D002984 ORTHO05D003561 4.6e-06 56.6 270 22.2
ClCG05G022960 Citrullus lanatus HOM05D002984 ORTHO05D000550 4.6e-06 56.6 121 27.3
MELO3C012221.2 Cucumis melo HOM05D002984 ORTHO05D003561 4.6e-06 56.6 267 21.7
Dinv04490 Davidia involucrata HOM05D002984 ORTHO05D003561 4.6e-06 56.6 114 28.1
Hund03157 Selenicereus undatus HOM05D002984 ORTHO05D003561 4.6e-06 56.6 111 27.9
TWI31G1103 Tripterygium wilfordii HOM05D002984 ORTHO05D003561 6.0e-06 56.2 275 22.5
VMungo1215G2122 Vigna mungo HOM05D002984 ORTHO05D003561 6.0e-06 56.2 242 21.9
CsaV3_5G034050 Cucumis sativus L. HOM05D002984 ORTHO05D003561 7.8e-06 55.8 267 22.1


User provided reference genes

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