Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.1e-99 366.7 187 100.0
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 3.4e-90 335.1 190 91.1
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 1.9e-64 249.6 184 70.1
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 5.3e-59 231.5 179 66.5
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 4.0e-54 215.3 179 64.8
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 3.4e-53 212.2 163 65.0
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.3e-52 210.3 187 62.6
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 6.3e-52 208.0 180 61.7
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 2.4e-51 206.1 186 61.8
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 7.0e-51 204.5 182 60.4
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 1.2e-50 203.8 189 58.2
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.2e-50 203.8 150 65.3
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 3.5e-50 202.2 186 58.6
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.7e-49 199.9 153 60.8
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.7e-49 199.9 153 60.8
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 1.7e-49 199.9 170 60.6
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.9e-49 199.1 171 62.6
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 2.9e-49 199.1 166 63.3
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.9e-49 199.1 181 58.6
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 3.8e-49 198.7 180 58.9
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 5.0e-49 198.4 139 66.2
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 6.5e-49 198.0 184 58.2
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 6.5e-49 198.0 191 60.7
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 8.5e-49 197.6 187 56.1
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 1.1e-48 197.2 187 58.3
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.5e-48 196.8 179 60.9
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 1.5e-48 196.8 151 60.9
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 2.5e-48 196.1 181 56.9
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.5e-48 196.1 172 59.9
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 2.5e-48 196.1 119 75.6
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 3.2e-48 195.7 187 55.6
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 5.5e-48 194.9 172 59.9
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 7.2e-48 194.5 185 59.5
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 9.4e-48 194.1 184 58.2
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 9.4e-48 194.1 177 59.3
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 1.2e-47 193.7 172 59.3
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.2e-47 193.7 177 55.9
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.6e-47 193.4 177 59.3
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 2.7e-47 192.6 164 59.1
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 3.6e-47 192.2 176 58.5
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 3.6e-47 192.2 183 59.6
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 4.7e-47 191.8 122 69.7
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 4.7e-47 191.8 141 64.5
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 4.7e-47 191.8 113 74.3
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 6.1e-47 191.4 182 56.0
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.1e-47 191.4 176 56.8
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 6.1e-47 191.4 119 71.4
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 6.1e-47 191.4 178 56.2
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.0e-46 190.7 170 58.8
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.8e-46 189.9 185 55.7
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 2.3e-46 189.5 171 57.3
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.3e-46 189.5 116 71.6
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 3.0e-46 189.1 172 55.8
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 3.0e-46 189.1 152 63.2
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 3.0e-46 189.1 186 54.3
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.0e-46 189.1 174 55.7
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 5.2e-46 188.3 180 55.6
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 5.2e-46 188.3 174 56.3
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 6.8e-46 188.0 172 60.5
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 8.8e-46 187.6 181 54.7
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 8.8e-46 187.6 110 73.6
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 1.5e-45 186.8 174 55.7
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 3.4e-45 185.7 180 56.7
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 3.4e-45 185.7 190 56.8
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 4.4e-45 185.3 172 59.3
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 5.7e-45 184.9 105 75.2
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 5.7e-45 184.9 174 54.0
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 9.8e-45 184.1 173 56.6
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 1.3e-44 183.7 114 66.7
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.7e-44 183.3 177 55.4
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 1.7e-44 183.3 181 52.5
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 1.7e-44 183.3 172 53.5
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 2.2e-44 183.0 170 52.4
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 2.2e-44 183.0 170 52.4
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 2.8e-44 182.6 170 52.4
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 3.7e-44 182.2 183 53.0
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 4.9e-44 181.8 193 51.3
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 4.9e-44 181.8 185 56.2
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 4.9e-44 181.8 177 55.4
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 6.3e-44 181.4 182 55.5
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 8.3e-44 181.0 183 54.1
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 1.1e-43 180.6 186 53.2
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 1.1e-43 180.6 186 53.2
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.1e-43 180.6 108 72.2
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 1.1e-43 180.6 188 52.7
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.4e-43 180.3 119 68.1
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 2.4e-43 179.5 183 56.3
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 3.1e-43 179.1 200 53.0
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 9.1e-43 177.6 190 53.2
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 7.7e-42 174.5 127 62.2
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 2.5e-40 169.5 105 71.4
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.6e-39 166.8 112 67.0
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 6.8e-38 161.4 200 50.5
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.0e-37 159.8 103 65.0
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 2.9e-36 156.0 137 57.7
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.9e-36 156.0 214 46.3
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 4.9e-36 155.2 137 57.7
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 1.4e-35 153.7 123 56.9
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.3e-33 147.1 122 54.9
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.3e-33 146.4 106 61.3
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 3.9e-33 145.6 106 60.4
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 5.0e-33 145.2 106 59.4
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 6.6e-33 144.8 144 49.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.5e-32 143.7 192 46.4
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 4.3e-32 142.1 137 51.8
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 5.6e-32 141.7 122 54.9
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 7.3e-32 141.4 106 58.5
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 2.1e-31 139.8 125 52.0
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 3.6e-31 139.0 173 47.4
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 8.0e-31 137.9 124 52.4
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 8.0e-31 137.9 136 50.0
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 8.0e-31 137.9 106 58.5
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.8e-30 136.7 106 56.6
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 2.3e-30 136.3 142 50.0
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 3.1e-30 136.0 124 54.0
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 3.1e-30 136.0 131 49.6
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.1e-30 136.0 131 49.6
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 6.8e-30 134.8 118 53.4
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 6.8e-30 134.8 107 55.1
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.2e-29 134.0 104 55.8
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.5e-29 133.7 115 53.0
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.6e-29 132.9 106 55.7
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.6e-29 132.9 107 54.2
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.6e-29 132.9 112 53.6
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 3.4e-29 132.5 107 54.2
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 4.4e-29 132.1 102 56.9
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 4.4e-29 132.1 125 50.4
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 4.4e-29 132.1 178 42.7
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 5.8e-29 131.7 190 42.6
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 5.8e-29 131.7 106 56.6
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 9.8e-29 131.0 126 47.6
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 9.8e-29 131.0 105 53.3
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 9.8e-29 131.0 180 41.7
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 1.3e-28 130.6 135 45.9
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 1.7e-28 130.2 179 43.6
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.2e-28 129.8 116 47.4
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 2.2e-28 129.8 112 52.7
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 2.2e-28 129.8 176 43.8
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 4.9e-28 128.6 191 42.9
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 1.4e-27 127.1 106 52.8
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.2e-27 125.9 174 40.8
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 5.4e-27 125.2 108 50.0
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 1.2e-26 124.0 180 42.8
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 1.6e-26 123.6 145 46.2
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.7e-26 122.9 135 45.9
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 4.6e-26 122.1 143 42.7
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 4.6e-26 122.1 93 60.2
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 2.3e-25 119.8 179 38.5
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 3.0e-25 119.4 177 41.2
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 8.6e-25 117.9 171 41.5
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 1.1e-24 117.5 95 54.7
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 1.9e-24 116.7 65 78.5
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 5.6e-24 115.2 157 38.9
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 5.6e-24 115.2 58 82.8
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 7.3e-24 114.8 105 48.6
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 9.5e-24 114.4 101 55.4
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 3.6e-23 112.5 107 49.5
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.1e-22 110.9 114 48.2
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 2.6e-21 106.3 190 33.2
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.7e-20 103.6 182 37.4
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 8.3e-20 101.3 64 67.2
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 1.1e-19 100.9 175 40.6
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.2e-18 97.4 213 29.6
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 2.7e-18 96.3 92 45.7
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 2.7e-18 96.3 115 41.7
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.7e-18 96.3 116 46.6
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 4.6e-18 95.5 123 52.0
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 1.0e-17 94.4 52 75.0
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 5.1e-17 92.0 60 63.3
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 5.8e-13 78.6 82 47.6
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 9.2e-11 71.2 95 37.9
Mapoly0021s0016 Marchantia polymorpha HOM05D003884 ORTHO05D004482 1.5e-08 63.9 95 30.5
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 4.7e-07 58.9 63 44.4
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 1.4e-06 57.4 68 42.6


User provided reference genes

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