Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G047300 Phaseolus vulgaris HOM05D000343 ORTHO05D005934 7.3e-43 176.8 87 100.0
Phvul.003G240100 Phaseolus vulgaris HOM05D000343 ORTHO05D005934 2.9e-31 138.3 78 88.5
Glyma.05G098800 Glycine max HOM05D000343 ORTHO05D005934 7.0e-30 133.7 78 84.6
TPR.G23881 Trifolium pratense HOM05D000343 ORTHO05D005934 1.2e-29 132.9 78 83.3
Psat4g082640 Pisum sativum HOM05D000343 ORTHO05D005934 2.1e-29 132.1 78 83.3
Glyma.17G166800 Glycine max HOM05D000343 ORTHO05D005934 1.7e-28 129.0 79 83.5
Ca_01077_v3 Cicer arietinum L. HOM05D000343 ORTHO05D005934 2.3e-28 128.6 78 80.8
Medtr4g094985 Medicago truncatula HOM05D000343 ORTHO05D005934 6.6e-28 127.1 78 78.2
Lj4g0009488 Lotus japonicus HOM05D000343 ORTHO05D005934 9.5e-27 123.2 78 76.9
arahy.Tifrunner.gnm1.ann1.FTH7SR Arachis hypogaea HOM05D000343 ORTHO05D005934 1.1e-25 119.8 78 73.1
Lalb_Chr16g0388921 Lupinus albus HOM05D000343 ORTHO05D005934 1.4e-25 119.4 78 74.4
CiPaw.01G012700 Carya illinoinensis HOM05D000343 ORTHO05D005934 8.9e-25 116.7 78 74.4
CANSAT25G2437 Cannabis sativa HOM05D000343 ORTHO05D005934 2.0e-24 115.5 78 69.2
Prupe.6G228900 Prunus persica HOM05D000343 ORTHO05D005934 4.4e-24 114.4 78 69.2
Haze_15349 Corylus avellana HOM05D000343 ORTHO05D005934 2.2e-23 112.1 78 69.2
MD02G1179100 Malus domestica HOM05D000343 ORTHO05D005934 2.9e-23 111.7 78 67.9
Manes.12G108600 Manihot esculenta HOM05D000343 ORTHO05D005934 2.9e-23 111.7 78 69.2
TAR628G0541 Trochodendron aralioides HOM05D000343 ORTHO05D005934 6.4e-23 110.5 78 70.5
Cpa.g.sc6.97 Carica papaya HOM05D000343 ORTHO05D005934 8.3e-23 110.2 78 70.5
Nn5g30422 Nelumbo nucifera HOM05D000343 ORTHO05D005934 8.3e-23 110.2 78 67.9
PGR102G0332 Punica granatum HOM05D000343 ORTHO05D005934 8.3e-23 110.2 78 69.2
MD15G1288800 Malus domestica HOM05D000343 ORTHO05D005934 1.1e-22 109.8 78 66.7
Cfa004063 Carpinus fangiana HOM05D000343 ORTHO05D005934 1.9e-22 109.0 78 66.7
ClCG02G008150 Citrullus lanatus HOM05D000343 ORTHO05D005934 3.2e-22 108.2 78 65.4
GSVIVG01000217001 Vitis vinifera HOM05D000343 ORTHO05D005934 7.1e-22 107.1 78 66.7
MELO3C024800.2 Cucumis melo HOM05D000343 ORTHO05D005934 9.2e-22 106.7 78 64.1
Gohir.D11G203500 Gossypium hirsutum HOM05D000343 ORTHO05D005934 1.2e-21 106.3 78 66.7
Gorai.007G218200 Gossypium raimondii HOM05D000343 ORTHO05D005934 1.2e-21 106.3 78 66.7
Sp4g02270 Schrenkiella parvula HOM05D000343 ORTHO05D005934 1.2e-21 106.3 78 65.4
FvH4_1g16780 Fragaria vesca HOM05D000343 ORTHO05D005934 1.6e-21 105.9 78 64.1
FAN19G1868 Fragaria x ananassa HOM05D000343 ORTHO05D005934 1.6e-21 105.9 78 64.1
FAN23G0436 Fragaria x ananassa HOM05D000343 ORTHO05D005934 1.6e-21 105.9 78 64.1
FAN28G2712 Fragaria x ananassa HOM05D000343 ORTHO05D005934 1.6e-21 105.9 78 64.1
RcHm_v2.0_Chr2g0106681 Rosa chinensis HOM05D000343 ORTHO05D005934 1.6e-21 105.9 78 64.1
Carub.0004s0249 Capsella rubella HOM05D000343 ORTHO05D005934 2.7e-21 105.1 78 64.1
FAN26G1628 Fragaria x ananassa HOM05D000343 ORTHO05D005934 2.7e-21 105.1 78 64.1
Manes.13G118200 Manihot esculenta HOM05D000343 ORTHO05D005934 2.7e-21 105.1 78 66.7
Potri.007G049000 Populus trichocarpa HOM05D000343 ORTHO05D005934 2.7e-21 105.1 78 65.4
Sc03g0001870 Simmondsia chinensis HOM05D000343 ORTHO05D005934 2.7e-21 105.1 76 65.8
THA.LOC104804212 Tarenaya hassleriana HOM05D000343 ORTHO05D005934 2.7e-21 105.1 78 64.1
Atru.chr3.248 Acer truncatum HOM05D000343 ORTHO05D005934 3.5e-21 104.8 78 65.4
COL.COLO4_11485 Corchorus olitorius HOM05D000343 ORTHO05D005934 3.5e-21 104.8 78 66.7
THA.LOC104807601 Tarenaya hassleriana HOM05D000343 ORTHO05D005934 3.5e-21 104.8 78 64.1
Ciclev10024910m.g Citrus clementina HOM05D000343 ORTHO05D005934 4.6e-21 104.4 76 68.4
A09p56970 Brassica napus HOM05D000343 ORTHO05D005934 6.0e-21 104.0 78 64.1
PSO170G1378 Papaver somniferum HOM05D000343 ORTHO05D005934 6.0e-21 104.0 78 64.1
BraA09t41089Z Brassica rapa HOM05D000343 ORTHO05D005934 7.8e-21 103.6 78 64.1
CSS0024485 Camellia sinensis var. sinensis HOM05D000343 ORTHO05D005934 7.8e-21 103.6 78 64.1
Sed0018175 Sechium edule HOM05D000343 ORTHO05D005934 7.8e-21 103.6 78 64.1
ClCG02G007610 Citrullus lanatus HOM05D000343 ORTHO05D005934 1.0e-20 103.2 78 62.8
MELO3C024722.2 Cucumis melo HOM05D000343 ORTHO05D005934 1.0e-20 103.2 78 62.8
CsaV3_2G036100 Cucumis sativus L. HOM05D000343 ORTHO05D005934 1.0e-20 103.2 78 62.8
Eucgr.H02227 Eucalyptus grandis HOM05D000343 ORTHO05D005934 1.0e-20 103.2 78 64.1
Thecc.01G063500 Theobroma cacao HOM05D000343 ORTHO05D005934 1.0e-20 103.2 78 64.1
FAN28G2108 Fragaria x ananassa HOM05D000343 ORTHO05D005934 1.3e-20 102.8 78 62.8
Sabra07G0043700 Salix brachista HOM05D000343 ORTHO05D005934 1.3e-20 102.8 78 62.8
PSO210G4728 Papaver somniferum HOM05D000343 ORTHO05D005934 1.7e-20 102.4 78 62.8
Aa31LG6G14140 Aethionema arabicum HOM05D002788 ORTHO05D005934 2.3e-20 102.1 77 62.3
MSTRG.23712 Avicennia marina HOM05D000343 ORTHO05D005934 2.3e-20 102.1 78 62.8
Dinv26868 Davidia involucrata HOM05D000343 ORTHO05D005934 2.3e-20 102.1 78 65.4
Sp7g34930 Schrenkiella parvula HOM05D000343 ORTHO05D005934 2.3e-20 102.1 77 62.3
BcaC07g40992 Brassica carinata HOM05D000343 ORTHO05D005934 3.0e-20 101.7 78 62.8
BcaNung02533 Brassica carinata HOM05D000343 ORTHO05D005934 3.0e-20 101.7 77 62.3
A01p01700 Brassica napus HOM05D000343 ORTHO05D005934 3.0e-20 101.7 77 62.3
C01p01870 Brassica napus HOM05D000343 ORTHO05D005934 3.0e-20 101.7 77 62.3
C08p39930 Brassica napus HOM05D000343 ORTHO05D005934 3.0e-20 101.7 78 62.8
BolC1t00179H Brassica oleracea HOM05D000343 ORTHO05D005934 3.0e-20 101.7 77 62.3
BolC8t51567H Brassica oleracea HOM05D000343 ORTHO05D005934 3.0e-20 101.7 78 62.8
BraA01t00161Z Brassica rapa HOM05D000343 ORTHO05D005934 3.0e-20 101.7 77 62.3
Thhalv10024415m.g Eutrema salsugineum HOM05D000343 ORTHO05D005934 3.0e-20 101.7 77 62.3
TWI73G1114 Tripterygium wilfordii HOM05D000343 ORTHO05D005934 3.0e-20 101.7 78 66.7
Os06g0690700 Oryza sativa ssp. japonica HOM05D000343 ORTHO05D005934 3.9e-20 101.3 78 62.8
Actinidia36461 Actinidia chinensis HOM05D000343 ORTHO05D005934 5.1e-20 100.9 78 62.8
Dinv30035 Davidia involucrata HOM05D000343 ORTHO05D005934 5.1e-20 100.9 78 64.1
CARHR245650 Cardamine hirsuta HOM05D000343 ORTHO05D005934 6.6e-20 100.5 77 61.0
Hund13914 Selenicereus undatus HOM05D000343 ORTHO05D005934 6.6e-20 100.5 76 65.8
Hund16367 Selenicereus undatus HOM05D000343 ORTHO05D005934 6.6e-20 100.5 76 64.5
vmacro05253 Vaccinium macrocarpon HOM05D000343 ORTHO05D005934 6.6e-20 100.5 78 62.8
Duzib147G0980 Durio zibethinus HOM05D000343 ORTHO05D005934 8.6e-20 100.1 78 61.5
Thhalv10000049m.g Eutrema salsugineum HOM05D000343 ORTHO05D005934 8.6e-20 100.1 80 63.8
PSO675G6974 Papaver somniferum HOM05D000343 ORTHO05D005934 8.6e-20 100.1 78 61.5
AT4G37270 Arabidopsis thaliana HOM05D000343 ORTHO05D005934 1.5e-19 99.4 77 61.0
Aa31LG7G13700 Aethionema arabicum HOM05D000343 ORTHO05D005934 1.9e-19 99.0 78 60.3
AL7G13570 Arabidopsis lyrata HOM05D000343 ORTHO05D005934 1.9e-19 99.0 77 61.0
Aqoxy5G01142 Aquilegia oxysepala HOM05D000343 ORTHO05D005934 2.5e-19 98.6 78 61.5
Carub.0007s0302 Capsella rubella HOM05D000343 ORTHO05D005934 2.5e-19 98.6 77 61.0
AL4G13170 Arabidopsis lyrata HOM05D000343 ORTHO05D005934 3.3e-19 98.2 74 63.5
Rhsim10G0112400 Rhododendron simsii HOM05D000343 ORTHO05D005934 3.3e-19 98.2 78 61.5
RhsimUnG0202900 Rhododendron simsii HOM05D000343 ORTHO05D005934 3.3e-19 98.2 78 61.5
unitig_62.g23417 Utricularia gibba HOM05D000343 ORTHO05D005934 4.3e-19 97.8 77 61.0
AUR62003941 Chenopodium quinoa HOM05D000343 ORTHO05D005934 5.6e-19 97.4 76 63.2
TAR376G0917 Trochodendron aralioides HOM05D000343 ORTHO05D005934 5.6e-19 97.4 82 59.8
AUR62038256 Chenopodium quinoa HOM05D000343 ORTHO05D005934 1.6e-18 95.9 76 61.8
Zm00001eb226120 Zea mays HOM05D000343 ORTHO05D005934 1.6e-18 95.9 78 59.0
HPP92_018306 Vanilla planifolia HOM05D000343 ORTHO05D005934 2.8e-18 95.1 75 62.7
HPP92_018309 Vanilla planifolia HOM05D000343 ORTHO05D005934 2.8e-18 95.1 75 62.7
HanXRQChr16g0529971 Helianthus annuus HOM05D000343 ORTHO05D005934 4.7e-18 94.4 78 61.5
ECA232G3783 Erigeron canadensis HOM05D000343 ORTHO05D005934 6.2e-18 94.0 78 61.5
Migut.H00391 Erythranthe guttata HOM05D000343 ORTHO05D005934 6.2e-18 94.0 78 57.7
Lsat_1_v5_gn_4_164080 Lactuca sativa HOM05D000343 ORTHO05D005934 8.1e-18 93.6 78 61.5
SGA_v2.0_scaffold143G35786 Striga asiatica HOM05D000343 ORTHO05D005934 8.1e-18 93.6 78 56.4
Ah.02g125740 Amaranthus hybridus HOM05D000343 ORTHO05D005934 1.1e-17 93.2 76 60.5
Nitab4.5_0001373g0020 Nicotiana tabacum HOM05D000343 ORTHO05D005934 1.4e-17 92.8 78 60.3
ATR0691G268 Amborella trichopoda HOM05D000343 ORTHO05D005934 1.8e-17 92.4 78 61.5
Solyc02g092920.4 Solanum lycopersicum HOM05D000343 ORTHO05D005934 2.4e-17 92.0 78 60.3
Sopen02g037480 Solanum pennellii HOM05D000343 ORTHO05D005934 2.4e-17 92.0 78 60.3
PGSC0003DMG400024953 Solanum tuberosum HOM05D000343 ORTHO05D005934 2.4e-17 92.0 78 60.3
Nitab4.5_0002578g0040 Nicotiana tabacum HOM05D000343 ORTHO05D005934 3.1e-17 91.7 78 59.0
CDE01G0023 Ceratophyllum demersum HOM05D000343 ORTHO05D005934 6.8e-17 90.5 76 57.9
Cc07_g06460 Coffea canephora HOM05D000343 ORTHO05D005934 6.8e-17 90.5 79 59.5
DCAR_010852 Daucus carota HOM05D000343 ORTHO05D005934 8.9e-17 90.1 76 61.8
Oeu013258.1 Olea europaea HOM05D000343 ORTHO05D005934 8.9e-17 90.1 78 55.1
Peaxi162Scf00945g00216 Petunia axillaris HOM05D000343 ORTHO05D005934 2.0e-16 89.0 78 56.4
SEGI_37969 Sequoiadendron giganteum HOM05D000343 ORTHO05D005934 7.6e-16 87.0 77 55.8
CAN.G370.9 Capsicum annuum HOM05D000343 ORTHO05D005934 1.7e-15 85.9 78 57.7
EL10Ac6g15688 Beta vulgaris HOM05D000343 ORTHO05D005934 3.8e-15 84.7 86 53.5
Pp3c3_31850 Physcomitrium patens HOM05D000343 ORTHO05D005934 7.1e-14 80.5 77 51.9
Sed0000005 Sechium edule HOM05D000343 ORTHO05D005934 7.8e-13 77.0 78 51.3
Mapoly0043s0122 Marchantia polymorpha HOM05D000343 ORTHO05D005934 2.5e-11 72.0 64 57.8
Actinidia12016 Actinidia chinensis HOM05D000343 ORTHO05D005934 3.3e-11 71.6 51 72.5
SMO353G0387 Selaginella moellendorffii HOM05D000343 ORTHO05D005934 1.3e-10 69.7 57 59.6
CBR_g41425 Chara braunii HOM05D000343 ORTHO05D005934 1.4e-09 66.2 79 41.8
Pp3c4_3060 Physcomitrium patens HOM05D000343 ORTHO05D005934 2.4e-09 65.5 62 54.8
AagrBONN_evm.TU.Sc2ySwM_344.3236 Anthoceros agrestis HOM05D000343 ORTHO05D005934 3.1e-09 65.1 77 46.8


User provided reference genes

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