Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.003G026900 Phaseolus vulgaris HOM05D005800 ORTHO05D007636 5.4e-281 970.3 481 100.0
VMungo1127G1618 Vigna mungo HOM05D005800 ORTHO05D007636 1.4e-252 875.9 483 90.5
Glyma.02G100600 Glycine max HOM05D005800 ORTHO05D007636 5.7e-238 827.4 482 85.1
TPR.G17115 Trifolium pratense HOM05D005800 ORTHO05D007636 3.3e-214 748.4 464 79.3
arahy.Tifrunner.gnm1.ann1.WU8RVJ Arachis hypogaea HOM05D005800 ORTHO05D007636 7.7e-211 737.3 465 77.4
Lj3g0013009 Lotus japonicus HOM05D005800 ORTHO05D007636 1.7e-210 736.1 466 77.7
arahy.Tifrunner.gnm1.ann1.ED2J4B Arachis hypogaea HOM05D005800 ORTHO05D007636 2.1e-208 729.2 465 76.3
Ca_23308_v3 Cicer arietinum L. HOM05D005800 ORTHO05D007636 1.4e-207 726.5 436 80.5
Medtr8g012965 Medicago truncatula HOM05D005800 ORTHO05D007636 1.8e-207 726.1 470 77.0
Haze_12748 Corylus avellana HOM05D005800 ORTHO05D007636 9.2e-180 634.0 464 66.2
Cfa014300 Carpinus fangiana HOM05D005800 ORTHO05D007636 3.5e-179 632.1 464 65.5
Potri.014G160300 Populus trichocarpa HOM05D005800 ORTHO05D007636 3.9e-178 628.6 438 69.2
QL08p029973 Quercus lobata HOM05D005800 ORTHO05D007636 7.3e-177 624.4 436 67.7
Ciclev10018214m.g Citrus clementina HOM05D005800 ORTHO05D007636 8.0e-176 620.9 439 67.4
CiPaw.04G192600 Carya illinoinensis HOM05D005800 ORTHO05D007636 1.1e-175 620.5 464 65.5
Gohir.D07G194900 Gossypium hirsutum HOM05D005800 ORTHO05D007636 3.1e-175 619.0 442 66.7
Gorai.001G218100 Gossypium raimondii HOM05D005800 ORTHO05D007636 3.1e-175 619.0 442 67.0
Atru.chr6.3277 Acer truncatum HOM05D005800 ORTHO05D007636 4.0e-175 618.6 441 67.8
TWI18G1217 Tripterygium wilfordii HOM05D005800 ORTHO05D007636 2.0e-174 616.3 436 67.7
PGR142G3833 Punica granatum HOM05D005800 ORTHO05D007636 2.4e-172 609.4 437 67.3
Atru.chr6.3292 Acer truncatum HOM05D005800 ORTHO05D007636 3.2e-172 609.0 433 67.7
Duzib211G0019 Durio zibethinus HOM05D005800 ORTHO05D007636 7.0e-172 607.8 443 64.8
Thecc.01G184600 Theobroma cacao HOM05D005800 ORTHO05D007636 9.2e-172 607.4 437 66.8
MD09G1116800 Malus domestica HOM05D005800 ORTHO05D007636 1.2e-171 607.1 438 67.8
Prupe.3G208000 Prunus persica HOM05D005800 ORTHO05D007636 4.6e-171 605.1 439 66.7
CSS0012074 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 1.3e-170 603.6 433 67.0
CSS0040237 Camellia sinensis var. sinensis HOM05D005800 ORTHO05D007636 3.0e-170 602.4 433 66.7
FAN14G5087 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.5e-169 600.1 438 66.9
CANSAT64G1164 Cannabis sativa HOM05D005800 ORTHO05D007636 3.3e-169 599.0 438 64.6
vmacro09372 Vaccinium macrocarpon HOM05D005800 ORTHO05D007636 2.1e-168 596.3 452 64.6
Nn1g07331 Nelumbo nucifera HOM05D005800 ORTHO05D007636 3.6e-168 595.5 434 66.4
Manes.12G056701 Manihot esculenta HOM05D005800 ORTHO05D007636 4.7e-168 595.1 435 67.1
Rhsim04G0046700 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.7e-168 595.1 474 62.0
GSVIVG01030530001 Vitis vinifera HOM05D005800 ORTHO05D007636 8.9e-167 590.9 431 66.6
FAN09G4368 Fragaria x ananassa HOM05D005800 ORTHO05D007636 1.5e-166 590.1 459 63.8
Sabra14G0122000 Salix brachista HOM05D005800 ORTHO05D007636 1.3e-165 587.0 397 69.8
Actinidia29202 Actinidia chinensis HOM05D005800 ORTHO05D007636 1.7e-165 586.6 460 63.0
Sc05g0006280 Simmondsia chinensis HOM05D005800 ORTHO05D007636 3.3e-161 572.4 437 64.3
THA.LOC104826609 Tarenaya hassleriana HOM05D005800 ORTHO05D007636 2.0e-158 563.1 449 61.7
ClCG02G018170 Citrullus lanatus HOM05D005800 ORTHO05D007636 5.8e-158 561.6 431 61.9
CsaV3_6G015560 Cucumis sativus L. HOM05D005800 ORTHO05D007636 1.3e-157 560.5 451 60.5
Sed0019308 Sechium edule HOM05D005800 ORTHO05D007636 1.1e-156 557.4 430 61.9
Cc05_g03680 Coffea canephora HOM05D005800 ORTHO05D007636 2.4e-156 556.2 437 61.1
EL10Ac9g22808 Beta vulgaris HOM05D005800 ORTHO05D007636 7.1e-156 554.7 406 64.8
Thhalv10002525m.g Eutrema salsugineum HOM05D005800 ORTHO05D007636 9.2e-156 554.3 447 62.2
Migut.F00824 Erythranthe guttata HOM05D005800 ORTHO05D007636 2.1e-155 553.1 437 62.0
Carub.0003s2619 Capsella rubella HOM05D005800 ORTHO05D007636 7.8e-155 551.2 444 61.5
PSO541G2790 Papaver somniferum HOM05D005800 ORTHO05D007636 7.8e-155 551.2 437 63.2
AUR62015110 Chenopodium quinoa HOM05D005800 ORTHO05D007636 2.3e-154 549.7 440 61.1
BcaB06g26821 Brassica carinata HOM05D005800 ORTHO05D007636 3.0e-154 549.3 446 61.2
PGSC0003DMG400001079 Solanum tuberosum HOM05D005800 ORTHO05D007636 3.0e-154 549.3 468 58.8
Solyc07g049740.4 Solanum lycopersicum HOM05D005800 ORTHO05D007636 6.6e-154 548.1 465 58.9
Peaxi162Scf00007g00131 Petunia axillaris HOM05D005800 ORTHO05D007636 1.9e-153 546.6 433 61.7
AT2G04560 Arabidopsis thaliana HOM05D005800 ORTHO05D007636 3.3e-153 545.8 446 61.2
AL3G42200 Arabidopsis lyrata HOM05D005800 ORTHO05D007636 4.3e-153 545.4 444 61.0
Hund24186 Selenicereus undatus HOM05D005800 ORTHO05D007636 7.3e-153 544.7 466 58.6
Aqoxy6G02415 Aquilegia oxysepala HOM05D005800 ORTHO05D007636 3.6e-152 542.3 443 61.4
AUR62017573 Chenopodium quinoa HOM05D005800 ORTHO05D007636 3.6e-152 542.3 460 58.9
SGA_v2.0_scaffold90G27705 Striga asiatica HOM05D005800 ORTHO05D007636 4.8e-152 542.0 436 61.9
Lalb_Chr07g0194251 Lupinus albus HOM05D005800 ORTHO05D007636 1.1e-151 540.8 345 77.7
Lsat_1_v5_gn_9_105061 Lactuca sativa HOM05D005800 ORTHO05D007636 1.8e-151 540.0 438 59.6
BcaC06g35880 Brassica carinata HOM05D005800 ORTHO05D007636 4.0e-151 538.9 453 60.0
Oeu012678.1 Olea europaea HOM05D005800 ORTHO05D007636 9.0e-151 537.7 418 62.4
Sopen07g025360 Solanum pennellii HOM05D005800 ORTHO05D007636 2.0e-150 536.6 439 60.1
ECA240G1426 Erigeron canadensis HOM05D005800 ORTHO05D007636 2.6e-150 536.2 439 59.9
BolC7t41459H Brassica oleracea HOM05D005800 ORTHO05D007636 9.9e-150 534.3 454 59.9
Nitab4.5_0000130g0280 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.3e-149 533.9 461 58.4
Nitab4.5_0008855g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.3e-149 533.9 457 58.4
Aa31sc76G50 Aethionema arabicum HOM05D005800 ORTHO05D007636 1.4e-148 530.4 441 59.6
C07p10140 Brassica napus HOM05D005800 ORTHO05D007636 4.2e-148 528.9 454 59.3
A07p06670 Brassica napus HOM05D005800 ORTHO05D007636 1.7e-146 523.5 455 59.6
Cpa.g.sc132.41 Carica papaya HOM05D005800 ORTHO05D007636 1.1e-145 520.8 447 57.7
Dinv39768 Davidia involucrata HOM05D005800 ORTHO05D007636 1.5e-145 520.4 399 62.9
Nitab4.5_0004549g0020 Nicotiana tabacum HOM05D005800 ORTHO05D007636 1.3e-144 517.3 426 60.1
BraA07t28458Z Brassica rapa HOM05D005800 ORTHO05D007636 1.8e-143 513.5 485 56.3
Gohir.A07G188100 Gossypium hirsutum HOM05D005800 ORTHO05D007636 2.6e-142 509.6 361 67.3
Dinv39765 Davidia involucrata HOM05D005800 ORTHO05D007636 1.3e-141 507.3 433 58.4
ATR1128G089 Amborella trichopoda HOM05D005800 ORTHO05D007636 1.1e-137 494.2 430 57.2
MELO3C019719.2 Cucumis melo HOM05D005800 ORTHO05D007636 9.6e-137 491.1 500 51.2
Rhsim04G0047300 Rhododendron simsii HOM05D005800 ORTHO05D007636 1.0e-133 481.1 470 53.8
HPP92_010001 Vanilla planifolia HOM05D005800 ORTHO05D007636 2.3e-130 469.9 432 56.0
Rhsim04G0046900 Rhododendron simsii HOM05D005800 ORTHO05D007636 9.6e-129 464.5 445 56.4
Os01g0752600 Oryza sativa ssp. japonica HOM05D005800 ORTHO05D007636 1.3e-128 464.2 440 53.9
SEGI_21918 Sequoiadendron giganteum HOM05D005800 ORTHO05D007636 4.0e-127 459.1 428 52.3
DCAR_021128 Daucus carota HOM05D005800 ORTHO05D007636 9.0e-127 458.0 728 38.5
Zm00001eb153480 Zea mays HOM05D005800 ORTHO05D007636 1.2e-126 457.6 431 52.4
FvH4_6g41870 Fragaria vesca HOM05D005800 ORTHO05D007636 2.2e-120 436.8 309 66.7
RcHm_v2.0_Chr2g0157701 Rosa chinensis HOM05D005800 ORTHO05D007636 7.7e-118 428.3 318 65.1
Pp3c10_3220 Physcomitrium patens HOM05D005800 ORTHO05D007636 2.1e-115 420.2 438 48.9
Eucgr.K00731 Eucalyptus grandis HOM05D005800 ORTHO05D007636 3.9e-114 416.0 302 65.2
Dinv39767 Davidia involucrata HOM05D005800 ORTHO05D007636 2.8e-112 409.8 371 56.6
MSTRG.9018 Avicennia marina HOM05D005800 ORTHO05D007636 8.8e-106 388.3 312 59.3
CAN.G290.4 Capsicum annuum HOM05D005800 ORTHO05D007636 2.8e-104 383.3 329 56.8
AagrBONN_evm.TU.Sc2ySwM_228.127 Anthoceros agrestis HOM05D005800 ORTHO05D007636 4.8e-104 382.5 364 51.1
CDE04G1587 Ceratophyllum demersum HOM05D005800 ORTHO05D007636 2.0e-102 377.1 436 47.0
SMO356G0467 Selaginella moellendorffii HOM05D005800 ORTHO05D007636 1.7e-101 374.0 368 48.6
CARHR102490 Cardamine hirsuta HOM05D005800 ORTHO05D007636 2.2e-101 373.6 315 59.4
Sp3g23350 Schrenkiella parvula HOM05D005800 ORTHO05D007636 6.1e-99 365.5 318 57.5
HanXRQChr14g0429261 Helianthus annuus HOM05D005800 ORTHO05D007636 2.0e-97 360.5 314 57.3
Psat0s3432g0080 Pisum sativum HOM05D005800 ORTHO05D007636 3.3e-97 359.8 218 79.4
Pp3c10_3060 Physcomitrium patens HOM05D005800 ORTHO05D007636 4.4e-97 359.4 398 47.2
Rhsim04G0049100 Rhododendron simsii HOM05D005800 ORTHO05D007636 4.2e-92 342.8 400 47.0
TAR629G1527 Trochodendron aralioides HOM05D005800 ORTHO05D007636 5.5e-84 315.8 222 67.1
FAN02G2441 Fragaria x ananassa HOM05D005800 ORTHO05D007636 2.4e-79 300.4 241 61.0
MD17G1108300 Malus domestica HOM05D005800 ORTHO05D007636 9.5e-76 288.5 351 47.3
Psat4g200480 Pisum sativum HOM05D005800 ORTHO05D007636 2.1e-75 287.3 192 72.9
TAR629G2547 Trochodendron aralioides HOM05D005800 ORTHO05D007636 1.7e-72 277.7 221 65.2
HPP92_015259 Vanilla planifolia HOM05D005800 ORTHO05D007636 1.6e-70 271.2 405 39.8
MBI15_g22711_MAGBIO Magnolia biondii HOM05D005800 ORTHO05D007636 4.1e-63 246.5 212 58.0
unitig_46.g18724 Utricularia gibba HOM05D005800 ORTHO05D007636 1.6e-59 234.6 211 57.3
Psat4g200520 Pisum sativum HOM05D010125 ORTHO05D007636 2.3e-53 214.2 140 74.3
Lalb_Chr07g0194261 Lupinus albus HOM05D005800 ORTHO05D007636 1.6e-51 208.0 138 76.1
Psat4g200320 Pisum sativum HOM05D005800 ORTHO05D007636 6.0e-46 189.5 134 70.9
HPP92_010007 Vanilla planifolia HOM05D005800 ORTHO05D007636 6.6e-45 186.0 173 54.3
Mapoly0007s0032 Marchantia polymorpha HOM05D005800 ORTHO05D007636 2.1e-43 181.0 195 44.6
RcHm_v2.0_Chr2g0157711 Rosa chinensis HOM05D005800 ORTHO05D007636 5.2e-42 176.4 145 61.4
Hma1.2p1_0445F.1_g154140 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 5.8e-41 172.9 135 60.0
HanXRQChr14g0429271 Helianthus annuus HOM05D005800 ORTHO05D007636 7.4e-28 129.4 107 57.9
Pp3c17_14860 Physcomitrium patens HOM05D005800 ORTHO05D026664 2.7e-22 110.9 393 26.2
PRCOL_00005284 Prasinoderma coloniale HOM05D001546 ORTHO05D002908 7.9e-22 109.4 429 24.7
CBR_g34007 Chara braunii HOM05D005800 ORTHO05D007636 1.9e-20 104.8 105 46.7
ATR1128G087 Amborella trichopoda HOM05D005800 ORTHO05D007636 2.5e-20 104.4 75 65.3
unitig_46.g18725 Utricularia gibba HOM05D005800 ORTHO05D007636 9.0e-18 95.9 133 46.6
AagrBONN_evm.TU.Sc2ySwM_344.931 Anthoceros agrestis HOM05D005800 ORTHO05D026664 2.3e-13 81.3 397 22.7
COL.COLO4_04206 Corchorus olitorius HOM05D005800 ORTHO05D007636 3.9e-13 80.5 56 69.6
COL.COLO4_04205 Corchorus olitorius HOM05D005800 ORTHO05D007636 4.2e-07 60.5 37 81.1


User provided reference genes

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