Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.002G035400 Phaseolus vulgaris HOM05D006383 ORTHO05D007815 0.0e+00 1112.4 538 100.0
Glyma.01G231700 Glycine max HOM05D006383 ORTHO05D007815 2.3e-296 1021.5 538 92.9
Glyma.11G014600 Glycine max HOM05D006383 ORTHO05D007815 6.9e-293 1010.0 538 92.2
VMungo1215G1626 Vigna mungo HOM05D006383 ORTHO05D007815 4.6e-289 997.3 540 91.3
LjContig00222g0014398 Lotus japonicus HOM05D006383 ORTHO05D007815 2.1e-286 988.4 539 90.4
Psat2g186800 Pisum sativum HOM05D006383 ORTHO05D007815 2.6e-284 981.5 537 89.2
TPR.G38040 Trifolium pratense HOM05D006383 ORTHO05D007815 3.4e-284 981.1 537 88.1
Medtr5g008710 Medicago truncatula HOM05D006383 ORTHO05D007815 2.9e-283 978.0 536 89.0
Nn1g08377 Nelumbo nucifera HOM05D006383 ORTHO05D007815 3.1e-261 904.8 538 81.4
TAR317G0001 Trochodendron aralioides HOM05D006383 ORTHO05D007815 1.8e-256 889.0 547 79.5
Manes.15G189200 Manihot esculenta HOM05D006383 ORTHO05D007815 4.4e-255 884.4 536 81.0
Lalb_Chr05g0211431 Lupinus albus HOM05D006383 ORTHO05D007815 1.3e-254 882.9 489 86.9
GSVIVG01027490001 Vitis vinifera HOM05D006383 ORTHO05D007815 8.2e-254 880.2 538 80.9
Atru.chr4.4 Acer truncatum HOM05D006383 ORTHO05D007815 1.4e-253 879.4 538 78.6
Haze_11088 Corylus avellana HOM05D006383 ORTHO05D007815 3.1e-253 878.2 545 78.9
Cfa008544 Carpinus fangiana HOM05D006383 ORTHO05D007815 7.0e-253 877.1 538 79.9
Prupe.2G049900 Prunus persica HOM05D006383 ORTHO05D007815 2.9e-251 871.7 538 78.4
Potri.013G161700 Populus trichocarpa HOM05D006383 ORTHO05D007815 6.5e-251 870.5 538 79.7
TWI79G0526 Tripterygium wilfordii HOM05D006383 ORTHO05D007815 3.2e-250 868.2 538 78.6
Actinidia07537 Actinidia chinensis HOM05D006383 ORTHO05D007815 6.1e-249 864.0 538 79.2
Lj8A304T42 Lonicera japonica HOM05D006383 ORTHO05D007815 2.2e-246 855.5 562 76.2
HanXRQChr10g0309251 Helianthus annuus HOM05D006383 ORTHO05D007815 6.3e-246 854.0 538 77.0
Lsat_1_v5_gn_5_82200 Lactuca sativa HOM05D006383 ORTHO05D007815 1.2e-244 849.7 538 76.0
ECA234G1746 Erigeron canadensis HOM05D006383 ORTHO05D007815 2.0e-244 849.0 538 76.2
QL10p065235 Quercus lobata HOM05D006383 ORTHO05D007815 1.7e-243 845.9 621 69.4
DCAR_020439 Daucus carota HOM05D006383 ORTHO05D007815 1.9e-242 842.4 544 75.7
Duzib248G1218 Durio zibethinus HOM05D006383 ORTHO05D007815 5.5e-242 840.9 539 76.6
CiPaw.02G126400 Carya illinoinensis HOM05D006383 ORTHO05D007815 2.6e-239 832.0 539 77.0
Migut.L01608 Erythranthe guttata HOM05D006383 ORTHO05D007815 1.2e-236 823.2 538 74.0
PSO782G2360 Papaver somniferum HOM05D006383 ORTHO05D007815 1.0e-235 820.1 540 75.9
RcHm_v2.0_Chr1g0329651 Rosa chinensis HOM05D006383 ORTHO05D007815 4.2e-234 814.7 538 74.3
Hund03213 Selenicereus undatus HOM05D006383 ORTHO05D007815 4.0e-232 808.1 538 73.8
THA.LOC104813077 Tarenaya hassleriana HOM05D006383 ORTHO05D007815 4.0e-232 808.1 546 74.5
CAN.G40.1 Capsicum annuum HOM05D006383 ORTHO05D007815 6.8e-232 807.4 540 73.1
FAN10G0291 Fragaria x ananassa HOM05D006383 ORTHO05D007815 8.9e-232 807.0 539 73.1
CSS0026217 Camellia sinensis var. sinensis HOM05D006383 ORTHO05D007815 1.2e-231 806.6 538 74.3
Sc26g0001410 Simmondsia chinensis HOM05D006383 ORTHO05D007815 2.0e-231 805.8 538 74.0
FAN03G2677 Fragaria x ananassa HOM05D006383 ORTHO05D007815 6.3e-230 800.8 544 72.4
Hma1.2p1_0122F.1_g057520 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 1.4e-229 799.7 540 73.9
CDE09G0807 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 7.0e-229 797.3 539 71.1
Solyc01g056340.4 Solanum lycopersicum HOM05D006383 ORTHO05D007815 4.5e-228 794.7 516 74.8
MD02G1269900 Malus domestica HOM05D006383 ORTHO05D007815 2.9e-227 792.0 539 73.3
CANSAT01G2053 Cannabis sativa HOM05D006383 ORTHO05D007815 5.0e-227 791.2 539 72.7
ClCG05G002590 Citrullus lanatus HOM05D006383 ORTHO05D007815 5.0e-227 791.2 537 72.4
Aqoxy1G01561 Aquilegia oxysepala HOM05D006383 ORTHO05D007815 8.6e-227 790.4 537 72.8
Gorai.012G136900 Gossypium raimondii HOM05D006383 ORTHO05D007815 1.1e-226 790.0 540 73.5
Sp6g07220 Schrenkiella parvula HOM05D006383 ORTHO05D007815 1.1e-226 790.0 541 72.8
Gohir.D04G150300 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.3e-226 788.5 540 73.5
Eucgr.E01781 Eucalyptus grandis HOM05D006383 ORTHO05D007815 9.5e-226 786.9 540 73.1
MELO3C006225.2 Cucumis melo HOM05D006383 ORTHO05D007815 1.2e-225 786.6 541 71.5
AL6G44030 Arabidopsis lyrata HOM05D006383 ORTHO05D007815 2.1e-225 785.8 545 71.2
Sed0006461 Sechium edule HOM05D006383 ORTHO05D007815 2.1e-225 785.8 539 72.2
Gohir.A04G110100 Gossypium hirsutum HOM05D006383 ORTHO05D007815 3.6e-225 785.0 540 73.1
Thhalv10028566m.g Eutrema salsugineum HOM05D006383 ORTHO05D007815 1.4e-224 783.1 541 72.5
BcaB01g02763 Brassica carinata HOM05D006383 ORTHO05D007815 2.9e-222 775.4 539 72.2
BolC3t15801H Brassica oleracea HOM05D006383 ORTHO05D007815 1.1e-221 773.5 541 71.5
C03p34900 Brassica napus HOM05D006383 ORTHO05D007815 1.9e-221 772.7 541 71.3
PSO063G0245 Papaver somniferum HOM05D006383 ORTHO05D007815 1.9e-221 772.7 540 72.8
BcaC01g04690 Brassica carinata HOM05D006383 ORTHO05D007815 2.4e-221 772.3 541 71.3
AT4G10180 Arabidopsis thaliana HOM05D006383 ORTHO05D007815 6.0e-220 767.7 545 69.9
Sabra13G0129300 Salix brachista HOM05D006383 ORTHO05D007815 7.8e-220 767.3 621 65.2
CARHR256640 Cardamine hirsuta HOM05D006383 ORTHO05D007815 1.6e-217 759.6 547 69.8
BraA03t12085Z Brassica rapa HOM05D006383 ORTHO05D007815 2.8e-217 758.8 540 70.0
A03p28870 Brassica napus HOM05D006383 ORTHO05D007815 4.7e-217 758.1 541 70.1
Peaxi162Scf00005g01511 Petunia axillaris HOM05D006383 ORTHO05D007815 3.1e-216 755.4 573 67.2
Carub.0006s2874 Capsella rubella HOM05D006383 ORTHO05D007815 6.4e-214 747.7 547 69.3
SGA_v2.0_scaffold222G42760 Striga asiatica HOM05D006383 ORTHO05D007815 1.3e-211 740.0 555 65.6
SalBow3G0737 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.3e-211 739.2 584 64.2
SalBow5G2916 Salvia bowleyana HOM05D006383 ORTHO05D007815 2.3e-211 739.2 584 64.2
Ciclev10015119m.g Citrus clementina HOM05D006383 ORTHO05D007815 1.5e-210 736.5 475 75.8
Oeu021235.1 Olea europaea HOM05D006383 ORTHO05D007815 5.6e-210 734.6 540 69.1
Os01g0104600 Oryza sativa ssp. japonica HOM05D006383 ORTHO05D007815 1.4e-208 729.9 537 66.3
PGR042G0734 Punica granatum HOM05D006383 ORTHO05D007815 3.7e-206 721.8 538 68.4
Aa31LG9G11770 Aethionema arabicum HOM05D006383 ORTHO05D007815 6.4e-206 721.1 544 66.9
Zm00001eb317230 Zea mays HOM05D006383 ORTHO05D007815 4.1e-205 718.4 537 66.3
FAN01G1101 Fragaria x ananassa HOM05D006383 ORTHO05D007815 9.2e-205 717.2 600 62.0
Zm00001eb341540 Zea mays HOM05D006383 ORTHO05D007815 1.3e-203 713.4 537 65.5
Sopen01g020390 Solanum pennellii HOM05D006383 ORTHO05D007815 6.2e-201 704.5 463 73.2
FAN06G4711 Fragaria x ananassa HOM05D006383 ORTHO05D007815 1.8e-200 703.0 539 65.9
ATR0620G042 Amborella trichopoda HOM05D006383 ORTHO05D007815 2.6e-199 699.1 492 68.9
EL10Ac3g06365 Beta vulgaris HOM05D006383 ORTHO05D007815 2.1e-196 689.5 651 56.7
Thecc.02G151200 Theobroma cacao HOM05D006383 ORTHO05D007815 1.1e-192 677.2 442 77.1
Nitab4.5_0007118g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 9.9e-191 670.6 608 59.2
Ca_24479_v3 Cicer arietinum L. HOM05D006383 ORTHO05D007815 4.2e-189 665.2 437 77.8
CsaV3_3G010030 Cucumis sativus L. HOM05D006383 ORTHO05D007815 7.1e-189 664.5 538 64.1
unitig_8.g3541 Utricularia gibba HOM05D006383 ORTHO05D007815 2.1e-188 662.9 492 64.8
FvH4_7g04420 Fragaria vesca HOM05D006383 ORTHO05D007815 3.0e-187 659.1 460 70.7
CiPaw.01G204500 Carya illinoinensis HOM05D006383 ORTHO05D007815 1.6e-185 653.3 413 77.7
Ah.07g203930 Amaranthus hybridus HOM05D000443 ORTHO05D001278 8.4e-174 614.4 538 59.7
AUR62030094 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.8e-169 599.4 538 58.2
SMO351G0573 Selaginella moellendorffii HOM05D006383 ORTHO05D007815 1.5e-159 567.0 547 53.2
HPP92_027515 Vanilla planifolia HOM05D006383 ORTHO05D007815 1.6e-156 557.0 491 58.0
Dinv26644 Davidia involucrata HOM05D006383 ORTHO05D007815 1.6e-148 530.4 345 76.5
Hma1.2p1_0122F.1_g057530 Hydrangea macrophylla HOM05D006383 ORTHO05D007815 4.5e-143 512.3 348 75.3
SHI24488 Sapria himalayana HOM05D006383 ORTHO05D007815 1.6e-135 487.3 510 52.2
Nitab4.5_0021341g0010 Nicotiana tabacum HOM05D006383 ORTHO05D007815 5.4e-128 462.2 302 73.5
Pp3c21_10400 Physcomitrium patens HOM05D006383 ORTHO05D007815 1.7e-126 457.2 885 34.5
Rhsim01G0101600 Rhododendron simsii HOM05D006383 ORTHO05D007815 1.5e-125 454.1 310 72.3
Pp3c11_18250 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.0e-123 446.0 846 35.3
AagrBONN_evm.TU.Sc2ySwM_228.1213 Anthoceros agrestis HOM05D006383 ORTHO05D007815 6.8e-123 445.3 971 32.6
HPP92_022397 Vanilla planifolia HOM05D006383 ORTHO05D007815 6.8e-123 445.3 373 61.4
Mapoly0064s0101 Marchantia polymorpha HOM05D006383 ORTHO05D007815 7.0e-120 435.3 959 32.2
Pp3c19_5540 Physcomitrium patens HOM05D006383 ORTHO05D007815 4.5e-119 432.6 893 33.3
PGSC0003DMG400031459 Solanum tuberosum HOM05D006383 ORTHO05D007815 2.8e-116 423.3 286 71.0
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 1.3e-113 414.5 314 68.5
Cc06_g23460 Coffea canephora HOM05D006383 ORTHO05D007815 6.6e-110 402.1 247 75.7
FAN06G0936 Fragaria x ananassa HOM05D006383 ORTHO05D007815 2.5e-109 400.2 308 64.0
Nitab4.5_0000075g0020 Nicotiana tabacum HOM05D006383 ORTHO05D007815 8.9e-107 391.7 252 77.0
HPP92_022268 Vanilla planifolia HOM05D006383 ORTHO05D007815 9.5e-93 345.1 263 64.6
vmacro20727 Vaccinium macrocarpon HOM05D006383 ORTHO05D007815 6.6e-86 322.4 196 81.1
AUR62038212 Chenopodium quinoa HOM05D006383 ORTHO05D007815 2.2e-73 280.8 289 55.0
CBR_g19443 Chara braunii HOM05D006383 ORTHO05D007815 1.9e-72 277.7 1179 23.5
Cpa.g.sc21.223 Carica papaya HOM05D006383 ORTHO05D007815 5.4e-72 276.2 170 78.8
SEGI_12536 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 3.7e-36 157.1 129 63.6
PRCOL_00006914 Prasinoderma coloniale HOM05D006383 ORTHO05D007815 1.7e-33 148.3 789 22.2
Sopen01g020410 Solanum pennellii HOM05D006383 ORTHO05D007815 7.9e-31 139.4 80 86.2
Glyma.13G043200 Glycine max HOM05D006383 ORTHO05D007815 4.2e-24 117.1 68 86.8
Zm00001eb129170 Zea mays HOM05D006383 ORTHO05D007815 6.7e-22 109.8 103 54.4
CDE11G0182 Ceratophyllum demersum HOM05D006383 ORTHO05D007815 7.0e-19 99.8 249 29.3
Cre13.g571560 Chlamydomonas reinhardtii HOM05D006383 ORTHO05D007815 1.6e-18 98.6 242 26.4
Zm00001eb417300 Zea mays HOM05D006383 ORTHO05D007815 3.8e-17 94.0 103 51.5
arahy.Tifrunner.gnm1.ann1.W6TY16 Arachis hypogaea HOM05D000199 ORTHO05D007815 1.8e-14 85.1 55 78.2
MCO10G269 Micromonas commoda HOM05D006383 ORTHO05D007815 1.5e-13 82.0 333 25.5
MBI11_g43687_MAGBIO Magnolia biondii HOM05D006383 ORTHO05D007815 6.5e-09 66.6 34 85.3
Actinidia02533 Actinidia chinensis HOM05D006383 ORTHO05D007815 2.5e-08 64.7 39 79.5
SEGI_16502 Sequoiadendron giganteum HOM05D006383 ORTHO05D007815 6.1e-07 60.1 50 62.0
arahy.Tifrunner.gnm1.ann1.505PCM Arachis hypogaea HOM05D003289 ORTHO05D016559 4.0e-06 57.4 34 73.5


User provided reference genes

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