Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G250400 Phaseolus vulgaris HOM05D006521 ORTHO05D008087 9.6e-206 719.9 362 100.0
VMungo1383G3636 Vigna mungo HOM05D006521 ORTHO05D008087 1.7e-199 699.1 362 96.1
Glyma.18G019200 Glycine max HOM05D006521 ORTHO05D008087 2.0e-187 659.1 362 92.3
Glyma.11G238100 Glycine max HOM05D006521 ORTHO05D008087 3.2e-185 651.7 363 91.2
Ca_16545_v3 Cicer arietinum L. HOM05D006521 ORTHO05D008087 5.3e-172 607.8 362 84.3
Lj6g0010661 Lotus japonicus HOM05D006521 ORTHO05D008087 9.0e-172 607.1 362 84.5
Psat5g088760 Pisum sativum HOM05D006521 ORTHO05D008087 1.2e-168 596.7 367 83.1
Medtr3g087760 Medicago truncatula HOM05D006521 ORTHO05D008087 3.6e-168 595.1 362 81.8
Lalb_Chr11g0075241 Lupinus albus HOM05D006521 ORTHO05D008087 9.1e-164 580.5 368 80.4
TPR.G22881 Trifolium pratense HOM05D006521 ORTHO05D008087 1.7e-162 576.2 390 75.9
arahy.Tifrunner.gnm1.ann1.2NAN3W Arachis hypogaea HOM05D006521 ORTHO05D008087 5.5e-161 571.2 374 79.1
arahy.Tifrunner.gnm1.ann1.IK9JFE Arachis hypogaea HOM05D006521 ORTHO05D008087 2.1e-160 569.3 374 79.1
MELO3C007776.2 Cucumis melo HOM05D006521 ORTHO05D008087 6.3e-149 531.2 353 73.9
ClCG01G018970 Citrullus lanatus HOM05D006521 ORTHO05D008087 9.1e-148 527.3 353 73.4
CANSAT01G1058 Cannabis sativa HOM05D006521 ORTHO05D008087 1.3e-146 523.5 354 74.0
CsaV3_6G045650 Cucumis sativus L. HOM05D006521 ORTHO05D008087 2.2e-146 522.7 353 73.1
Thecc.01G106200 Theobroma cacao HOM05D006521 ORTHO05D008087 1.9e-145 519.6 370 71.9
Manes.12G138400 Manihot esculenta HOM05D006521 ORTHO05D008087 1.2e-144 516.9 368 71.7
Duzib147G0857 Durio zibethinus HOM05D006521 ORTHO05D008087 6.1e-144 514.6 357 72.8
Cpa.g.sc20.228 Carica papaya HOM05D006521 ORTHO05D008087 5.7e-142 508.1 353 71.7
Eucgr.I00394 Eucalyptus grandis HOM05D006521 ORTHO05D008087 2.2e-141 506.1 356 69.4
Sed0013283 Sechium edule HOM05D006521 ORTHO05D008087 6.3e-141 504.6 343 72.3
Ciclev10025891m.g Citrus clementina HOM05D006521 ORTHO05D008087 8.3e-141 504.2 366 70.8
Sed0002886 Sechium edule HOM05D006521 ORTHO05D008087 7.0e-140 501.1 363 70.2
QL06p050323 Quercus lobata HOM05D006521 ORTHO05D008087 1.6e-139 500.0 365 69.6
Prupe.3G102100 Prunus persica HOM05D006521 ORTHO05D008087 4.5e-139 498.4 350 72.3
Gorai.008G103700 Gossypium raimondii HOM05D006521 ORTHO05D008087 1.0e-138 497.3 357 71.4
TWI74G1358 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 1.0e-138 497.3 353 71.1
TAR376G0467 Trochodendron aralioides HOM05D006521 ORTHO05D008087 2.2e-138 496.1 353 68.8
TWI77G0511 Tripterygium wilfordii HOM05D006521 ORTHO05D008087 2.9e-138 495.7 354 70.9
THA.LOC104824871 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 3.8e-138 495.4 354 68.6
Atru.chr4.229 Acer truncatum HOM05D006521 ORTHO05D008087 8.5e-138 494.2 369 68.6
Hma1.2p1_0011F.1_g007170 Hydrangea macrophylla HOM05D006521 ORTHO05D008087 1.1e-137 493.8 372 68.3
Gorai.007G061700 Gossypium raimondii HOM05D006521 ORTHO05D008087 1.5e-137 493.4 357 69.2
THA.LOC104807700 Tarenaya hassleriana HOM05D006521 ORTHO05D008087 1.9e-137 493.0 364 67.9
Duzib264G0874 Durio zibethinus HOM05D006521 ORTHO05D008087 4.2e-137 491.9 357 69.7
Potri.005G079300 Populus trichocarpa HOM05D006521 ORTHO05D008087 1.6e-136 490.0 355 71.0
AT4G39820 Arabidopsis thaliana HOM05D006521 ORTHO05D008087 2.1e-136 489.6 349 67.9
Dinv16313 Davidia involucrata HOM05D006521 ORTHO05D008087 4.7e-136 488.4 357 69.5
RcHm_v2.0_Chr2g0115391 Rosa chinensis HOM05D006521 ORTHO05D008087 4.7e-136 488.4 360 68.3
Dinv00937 Davidia involucrata HOM05D006521 ORTHO05D008087 1.8e-135 486.5 357 69.2
Carub.0007s0173 Capsella rubella HOM05D006521 ORTHO05D008087 2.6e-134 482.6 365 64.4
Aqoxy5G01962 Aquilegia oxysepala HOM05D006521 ORTHO05D008087 4.4e-134 481.9 355 67.3
AL7G12040 Arabidopsis lyrata HOM05D006521 ORTHO05D008087 4.4e-134 481.9 349 66.8
Thhalv10025314m.g Eutrema salsugineum HOM05D006521 ORTHO05D008087 4.4e-134 481.9 361 64.5
CARHR246880 Cardamine hirsuta HOM05D006521 ORTHO05D008087 5.7e-134 481.5 349 66.5
Aa31LG6G15450 Aethionema arabicum HOM05D006521 ORTHO05D008087 1.7e-133 479.9 368 64.7
PSO447G0171 Papaver somniferum HOM05D006521 ORTHO05D008087 2.2e-133 479.6 353 67.4
Sp7g36070 Schrenkiella parvula HOM05D006521 ORTHO05D008087 2.2e-133 479.6 347 66.3
PGR004G2411 Punica granatum HOM05D006521 ORTHO05D008087 2.8e-133 479.2 364 67.0
BolC3t20094H Brassica oleracea HOM05D006521 ORTHO05D008087 4.9e-133 478.4 361 64.8
C03p78340 Brassica napus HOM05D006521 ORTHO05D008087 8.3e-133 477.6 362 64.4
FAN19G2752 Fragaria x ananassa HOM05D006521 ORTHO05D008087 2.4e-132 476.1 341 71.0
PSO210G2459 Papaver somniferum HOM05D006521 ORTHO05D008087 5.4e-132 474.9 353 66.6
FvH4_1g21530 Fragaria vesca HOM05D006521 ORTHO05D008087 7.0e-132 474.6 341 70.7
A08p23330 Brassica napus HOM05D006521 ORTHO05D008087 1.6e-131 473.4 347 65.7
BraA08t34287Z Brassica rapa HOM05D006521 ORTHO05D008087 1.6e-131 473.4 347 65.7
FAN28G0591 Fragaria x ananassa HOM05D006521 ORTHO05D008087 2.0e-131 473.0 344 70.3
FAN23G2501 Fragaria x ananassa HOM05D006521 ORTHO05D008087 3.5e-131 472.2 341 70.7
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 1.0e-130 470.7 365 66.8
Sc16g0005450 Simmondsia chinensis HOM05D006521 ORTHO05D008087 1.9e-129 466.5 344 67.4
HanXRQChr16g0527921 Helianthus annuus HOM05D006521 ORTHO05D008087 2.8e-128 462.6 365 64.7
Rhsim10G0157900 Rhododendron simsii HOM05D006521 ORTHO05D008087 2.3e-127 459.5 375 63.5
SGA_v2.0_scaffold2G01323 Striga asiatica HOM05D006521 ORTHO05D008087 2.0e-126 456.4 340 66.8
CiPaw.03G138700 Carya illinoinensis HOM05D006521 ORTHO05D008087 9.8e-126 454.1 358 64.0
Haze_24978 Corylus avellana HOM05D006521 ORTHO05D008087 1.3e-125 453.8 366 63.4
Cc07_g15580 Coffea canephora HOM05D006521 ORTHO05D008087 1.2e-123 447.2 357 66.9
Lsat_1_v5_gn_4_21220 Lactuca sativa HOM05D006521 ORTHO05D008087 2.7e-123 446.0 356 64.3
ECA234G2647 Erigeron canadensis HOM05D006521 ORTHO05D008087 3.5e-123 445.7 356 64.6
SHI11594 Sapria himalayana HOM05D006521 ORTHO05D008087 3.5e-123 445.7 344 65.7
AUR62002034 Chenopodium quinoa HOM05D006521 ORTHO05D008087 1.3e-122 443.7 337 65.3
SalBow3G0008 Salvia bowleyana HOM05D006521 ORTHO05D008087 3.0e-122 442.6 357 62.5
AUR62003763 Chenopodium quinoa HOM05D006521 ORTHO05D008087 8.6e-122 441.0 337 65.0
Oeu053565.1 Olea europaea HOM05D006521 ORTHO05D008087 1.6e-120 436.8 362 62.4
Ah.02g122760 Amaranthus hybridus HOM05D006521 ORTHO05D008087 4.0e-119 432.2 360 61.4
HanXRQChr15g0471711 Helianthus annuus HOM05D006521 ORTHO05D008087 4.0e-119 432.2 339 63.7
Sopen05g030360 Solanum pennellii HOM05D006521 ORTHO05D008087 4.0e-119 432.2 356 61.8
Migut.H02388 Erythranthe guttata HOM05D006521 ORTHO05D008087 1.2e-118 430.6 342 62.3
Nitab4.5_0000715g0180 Nicotiana tabacum HOM05D006521 ORTHO05D008087 1.2e-118 430.6 379 58.8
Cfa002704 Carpinus fangiana HOM05D006521 ORTHO05D008087 2.6e-118 429.5 331 66.2
Lsat_1_v5_gn_2_67800 Lactuca sativa HOM05D006521 ORTHO05D008087 2.6e-118 429.5 341 64.2
Solyc05g051840.1 Solanum lycopersicum HOM05D006521 ORTHO05D008087 2.6e-118 429.5 347 62.2
PGSC0003DMG400021832 Solanum tuberosum HOM05D006521 ORTHO05D008087 5.8e-118 428.3 365 59.7
Ah.02g120360 Amaranthus hybridus HOM05D006521 ORTHO05D008087 2.4e-116 422.9 352 60.8
CAN.G1494.2 Capsicum annuum HOM05D006521 ORTHO05D008087 1.6e-115 420.2 369 59.1
Hund13498 Selenicereus undatus HOM05D006521 ORTHO05D008087 6.2e-112 408.3 337 62.3
unitig_32.g11814 Utricularia gibba HOM05D006521 ORTHO05D008087 1.1e-111 407.5 351 59.5
DCAR_011503 Daucus carota HOM05D006521 ORTHO05D008087 3.1e-111 406.0 351 61.3
Lj4A881T25 Lonicera japonica HOM05D006521 ORTHO05D008087 6.4e-109 398.3 296 70.9
Nn1g05268 Nelumbo nucifera HOM05D006521 ORTHO05D008087 1.9e-105 386.7 308 62.0
HPP92_016137 Vanilla planifolia HOM05D006521 ORTHO05D008087 1.9e-105 386.7 348 58.3
BcaNung05326 Brassica carinata HOM05D006521 ORTHO05D008087 5.2e-103 378.6 301 60.5
Lj4A883T21 Lonicera japonica HOM05D006521 ORTHO05D008087 2.6e-102 376.3 357 57.4
Actinidia36602 Actinidia chinensis HOM05D006521 ORTHO05D008087 4.4e-102 375.6 294 65.6
ATR0789G153 Amborella trichopoda HOM05D006521 ORTHO05D008087 7.6e-102 374.8 468 43.6
CDE10G1235 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 1.0e-98 364.4 344 54.9
Nitab4.5_0005597g0010 Nicotiana tabacum HOM05D006521 ORTHO05D008087 5.6e-97 358.6 357 55.2
Atru.chr1.3715 Acer truncatum HOM05D006521 ORTHO05D008087 3.1e-95 352.8 358 55.0
COL.COLO4_09911 Corchorus olitorius HOM05D006521 ORTHO05D008087 2.6e-94 349.7 363 53.2
C01p00850 Brassica napus HOM05D006521 ORTHO05D008087 2.0e-86 323.6 357 50.7
SEGI_26188 Sequoiadendron giganteum HOM05D006521 ORTHO05D008087 1.1e-81 307.8 566 34.6
SMO353G0213 Selaginella moellendorffii HOM05D006521 ORTHO05D008087 9.6e-73 278.1 342 42.7
A01p00740 Brassica napus HOM05D006521 ORTHO05D008087 1.8e-71 273.9 276 53.3
EL10Ac6g15070 Beta vulgaris HOM05D006521 ORTHO05D008087 5.3e-71 272.3 204 67.6
AagrBONN_evm.TU.Sc2ySwM_368.767 Anthoceros agrestis HOM05D006521 ORTHO05D008087 9.0e-71 271.6 398 37.2
Mapoly0165s0018 Marchantia polymorpha HOM05D006521 ORTHO05D008087 4.5e-70 269.2 428 36.4
Pp3c19_5060 Physcomitrium patens HOM05D006521 ORTHO05D008087 4.9e-69 265.8 421 36.3
Os02g0550400 Oryza sativa ssp. japonica HOM05D006521 ORTHO05D008087 6.5e-69 265.4 337 46.6
Pp3c22_3810 Physcomitrium patens HOM05D006521 ORTHO05D008087 4.2e-68 262.7 402 38.3
ECA238G1388 Erigeron canadensis HOM05D001700 ORTHO05D002131 1.0e-61 241.5 194 60.8
Atru.chr1.3697 Acer truncatum HOM05D006521 ORTHO05D008087 1.2e-59 234.6 146 80.8
ECA238G2228 Erigeron canadensis HOM05D006521 ORTHO05D008087 3.6e-59 233.0 154 70.8
Pp3c10_9400 Physcomitrium patens HOM05D006521 ORTHO05D008087 1.8e-55 220.7 371 32.6
Pp3c14_5890 Physcomitrium patens HOM05D006521 ORTHO05D008087 5.5e-52 209.1 371 31.8
BcaNung00904 Brassica carinata HOM05D006521 ORTHO05D008087 2.6e-49 200.3 114 84.2
Peaxi162Scf00295g00033 Petunia axillaris HOM05D006521 ORTHO05D008087 2.2e-48 197.2 173 59.5
HanXRQChr10g0288811 Helianthus annuus HOM05D006521 ORTHO05D008087 6.3e-40 169.1 105 81.0
CBR_g34484 Chara braunii HOM05D006521 ORTHO05D008087 3.5e-38 163.3 263 37.6
TAR636G0192 Trochodendron aralioides HOM05D006521 ORTHO05D008087 9.7e-33 145.2 127 62.2
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 7.0e-23 112.5 108 55.6
GSVIVG01022164001 Vitis vinifera HOM05D006521 ORTHO05D008087 5.2e-18 96.3 70 70.0
PRCOL_00001846 Prasinoderma coloniale HOM05D006521 ORTHO05D008087 3.0e-10 70.5 272 27.6
CDE10G1372 Ceratophyllum demersum HOM05D006521 ORTHO05D008087 2.0e-09 67.8 77 46.8
Atru.chr1.3698 Acer truncatum HOM05D006521 ORTHO05D008087 2.2e-08 64.3 76 48.7


User provided reference genes

Program Settings