Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 1.2e-192 676.4 346 100.0
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 1.4e-177 626.3 346 92.8
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 1.7e-175 619.4 346 91.9
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 4.8e-162 574.7 346 86.4
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 8.1e-162 573.9 348 85.9
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 2.4e-161 572.4 346 85.8
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 5.6e-155 551.2 346 81.5
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 1.4e-153 546.6 349 81.1
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 3.4e-152 542.0 346 79.8
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.3e-151 540.0 346 78.6
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 1.3e-151 540.0 353 77.9
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.7e-151 539.7 346 78.9
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 2.2e-151 539.3 346 78.9
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 1.1e-150 537.0 345 79.4
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 1.9e-150 536.2 391 74.7
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 2.4e-150 535.8 370 76.8
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 3.2e-150 535.4 344 80.5
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 3.2e-150 535.4 347 79.3
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 4.2e-150 535.0 349 78.8
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 5.5e-150 534.6 323 84.2
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 9.3e-150 533.9 351 78.1
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 1.2e-149 533.5 346 78.3
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 2.7e-149 532.3 346 78.9
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 3.5e-149 531.9 326 81.3
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 6.0e-149 531.2 350 77.4
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 1.0e-148 530.4 374 73.8
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 2.3e-148 529.3 348 78.2
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 5.1e-148 528.1 351 77.5
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 5.1e-148 528.1 323 81.7
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 5.1e-148 528.1 344 79.1
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 8.7e-148 527.3 325 81.5
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 8.7e-148 527.3 347 77.8
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.5e-147 525.8 323 81.1
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 2.5e-147 525.8 323 81.1
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 2.5e-147 525.8 346 77.7
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 3.3e-147 525.4 346 76.9
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 4.3e-147 525.0 347 76.7
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 4.3e-147 525.0 347 77.2
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 4.3e-147 525.0 346 77.5
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 4.3e-147 525.0 347 76.9
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 5.6e-147 524.6 329 81.2
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 9.6e-147 523.9 329 80.5
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 2.1e-146 522.7 351 77.2
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 2.8e-146 522.3 344 77.0
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 2.8e-146 522.3 347 76.4
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 6.2e-146 521.2 348 77.0
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 6.2e-146 521.2 348 77.0
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 8.2e-146 520.8 355 75.2
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 8.2e-146 520.8 346 76.3
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 8.2e-146 520.8 346 76.3
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 8.2e-146 520.8 346 76.3
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 8.2e-146 520.8 359 74.4
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 8.2e-146 520.8 346 75.7
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 1.1e-145 520.4 347 75.5
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 1.1e-145 520.4 323 79.3
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 1.4e-145 520.0 346 77.2
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 1.8e-145 519.6 348 75.9
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 1.8e-145 519.6 348 75.9
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 1.8e-145 519.6 344 76.5
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 2.4e-145 519.2 355 75.2
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 2.4e-145 519.2 347 75.8
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 2.4e-145 519.2 353 75.6
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 3.1e-145 518.8 363 74.4
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 3.1e-145 518.8 346 76.6
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 9.0e-145 517.3 349 75.4
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 1.2e-144 516.9 348 75.6
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 2.6e-144 515.8 349 75.9
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 1.0e-143 513.8 346 76.0
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 1.3e-143 513.5 346 74.6
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 1.3e-143 513.5 346 74.9
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 1.7e-143 513.1 348 72.7
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 2.2e-143 512.7 346 74.6
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 2.9e-143 512.3 358 74.0
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 2.9e-143 512.3 348 72.7
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 2.9e-143 512.3 327 78.3
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 3.8e-143 511.9 347 74.4
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 1.4e-142 510.0 346 75.1
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 2.5e-142 509.2 325 77.8
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 2.5e-142 509.2 347 74.6
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 3.2e-142 508.8 323 78.6
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 3.2e-142 508.8 311 81.4
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 5.5e-142 508.1 349 74.5
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 7.1e-142 507.7 347 74.4
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 7.1e-142 507.7 318 79.9
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 7.1e-142 507.7 347 74.4
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 9.3e-142 507.3 354 73.4
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 1.2e-141 506.9 357 73.7
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 1.6e-141 506.5 348 71.3
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 1.6e-141 506.5 323 78.0
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 2.7e-141 505.8 347 73.8
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.7e-141 505.8 347 73.8
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 3.5e-141 505.4 346 74.6
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 3.5e-141 505.4 346 74.0
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 7.9e-141 504.2 346 74.6
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 1.3e-140 503.4 324 77.8
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 1.3e-140 503.4 348 71.0
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 2.3e-140 502.7 323 77.4
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 3.0e-140 502.3 318 79.6
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 3.0e-140 502.3 346 73.7
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 3.0e-140 502.3 348 70.7
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 5.1e-140 501.5 346 73.7
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 8.7e-140 500.7 346 73.4
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 1.9e-139 499.6 346 74.3
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.5e-139 499.2 324 77.2
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 3.3e-139 498.8 324 76.9
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 1.8e-137 493.0 324 75.6
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 3.1e-137 492.3 347 73.8
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 6.9e-137 491.1 339 72.0
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 8.5e-135 484.2 349 70.8
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 6.1e-133 478.0 318 76.7
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.8e-132 476.5 313 75.4
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 2.3e-132 476.1 348 71.6
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.3e-131 472.2 347 69.5
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 1.2e-128 463.8 347 70.3
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 1.2e-128 463.8 347 70.3
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 1.3e-127 460.3 323 70.3
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 5.0e-127 458.4 347 70.3
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 5.5e-126 454.9 350 67.4
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 7.2e-126 454.5 351 66.7
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 7.2e-126 454.5 354 66.9
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 3.9e-124 448.7 326 66.3
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 2.8e-122 442.6 315 68.3
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 4.8e-122 441.8 315 67.9
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 2.4e-121 439.5 346 66.2
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 3.1e-121 439.1 327 68.5
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 1.9e-118 429.9 305 70.8
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 3.2e-118 429.1 318 65.7
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 4.2e-118 428.7 324 68.8
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 5.5e-118 428.3 347 68.0
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 8.8e-116 421.0 325 66.8
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.7e-114 416.8 277 74.4
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 1.7e-114 416.8 277 74.4
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 8.2e-114 414.5 318 63.8
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 2.2e-111 406.4 335 63.3
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 3.6e-109 399.1 276 72.5
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 8.0e-109 397.9 327 61.2
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 2.6e-107 392.9 347 56.8
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 7.5e-99 364.8 231 77.5
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 9.1e-97 357.8 255 71.8
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 5.7e-91 338.6 199 82.4
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 2.8e-90 336.3 228 72.8
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.4e-81 306.6 298 54.7
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 9.8e-75 284.6 215 65.6
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 3.3e-70 269.6 246 60.6
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.5e-67 260.8 185 66.5
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 1.5e-67 260.8 185 66.5
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 1.3e-66 257.7 185 72.4
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 1.3e-58 231.1 165 66.7
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 5.1e-55 219.2 131 80.2
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 1.8e-52 210.7 123 81.3
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 2.6e-51 206.8 140 72.9
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 6.0e-48 195.7 122 73.0
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 1.3e-45 188.0 164 60.4
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 8.1e-45 185.3 164 60.4
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 9.0e-44 181.8 164 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.7e-37 159.8 127 61.4
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 9.0e-28 128.6 118 62.7
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.4e-25 121.3 92 71.7
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 3.5e-24 116.7 70 80.0
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 6.7e-23 112.5 160 42.5
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.1e-22 111.7 90 66.7
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 3.7e-21 106.7 78 67.9
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 7.9e-16 89.0 69 63.8
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 3.3e-14 83.6 78 55.1
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 3.3e-14 83.6 118 41.5
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 3.8e-10 70.1 49 67.3
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 2.1e-08 64.3 42 81.0
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 1.8e-07 61.2 36 69.4


User provided reference genes

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