Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Peaxi162Scf00062g02012 Petunia axillaris HOM05D003776 ORTHO05D004459 1.7e-85 319.3 159 100.0
Peaxi162Scf00574g00919 Petunia axillaris HOM05D003776 ORTHO05D004459 1.3e-61 240.0 124 98.4
Nitab4.5_0002658g0150 Nicotiana tabacum HOM05D003776 ORTHO05D004459 5.4e-36 154.8 99 80.8
Solyc12g006480.2 Solanum lycopersicum HOM05D003776 ORTHO05D004459 3.5e-35 152.1 99 79.8
Sopen12g002420 Solanum pennellii HOM05D003776 ORTHO05D004459 3.5e-35 152.1 99 79.8
Peaxi162Scf01211g00016 Petunia axillaris HOM05D003776 ORTHO05D004459 3.4e-30 135.6 73 91.8
Lj7C629G11 Lonicera japonica HOM05D003776 ORTHO05D004459 1.4e-23 113.6 99 58.6
vmacro06129 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 3.1e-23 112.5 105 56.2
Rhsim03G0247900 Rhododendron simsii HOM05D003776 ORTHO05D004459 1.5e-22 110.2 100 59.0
Oeu055885.1 Olea europaea HOM05D003776 ORTHO05D004459 3.4e-22 109.0 99 63.6
TAR625G0211 Trochodendron aralioides HOM05D003776 ORTHO05D004459 5.8e-22 108.2 97 60.8
Cc06_g08530 Coffea canephora HOM05D003776 ORTHO05D004459 1.7e-21 106.7 97 62.9
Dinv36529 Davidia involucrata HOM05D003776 ORTHO05D004459 4.9e-21 105.1 100 58.0
MSTRG.19598 Avicennia marina HOM05D003776 ORTHO05D004459 1.1e-20 104.0 99 61.6
QL02p088328 Quercus lobata HOM05D003776 ORTHO05D004459 1.1e-20 104.0 96 59.4
Haze_25580 Corylus avellana HOM05D003776 ORTHO05D004459 2.4e-20 102.8 101 57.4
DCAR_017818 Daucus carota HOM05D003776 ORTHO05D004459 2.4e-20 102.8 108 49.1
COL.COLO4_35084 Corchorus olitorius HOM05D003776 ORTHO05D004459 4.2e-20 102.1 99 56.6
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea HOM05D003776 ORTHO05D004459 7.1e-20 101.3 126 46.0
Gorai.001G042000 Gossypium raimondii HOM05D003776 ORTHO05D004459 7.1e-20 101.3 100 56.0
TWI34G1787 Tripterygium wilfordii HOM05D003776 ORTHO05D004459 9.3e-20 100.9 99 53.5
GSVIVG01015528001 Vitis vinifera HOM05D003776 ORTHO05D004459 9.3e-20 100.9 101 53.5
Cfa003371 Carpinus fangiana HOM05D003776 ORTHO05D004459 1.2e-19 100.5 101 56.4
CiPaw.03G244000 Carya illinoinensis HOM05D003776 ORTHO05D004459 1.2e-19 100.5 99 53.5
Cpa.g.sc75.31 Carica papaya HOM05D003776 ORTHO05D004459 2.1e-19 99.8 105 54.3
Gohir.A07G035800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 2.7e-19 99.4 100 56.0
Gohir.D07G039800 Gossypium hirsutum HOM05D003776 ORTHO05D004459 2.7e-19 99.4 100 55.0
CANSAT11G0130 Cannabis sativa HOM05D003776 ORTHO05D004459 4.6e-19 98.6 101 54.5
Ciclev10007244m.g Citrus clementina HOM05D003776 ORTHO05D004459 6.0e-19 98.2 100 57.0
Prupe.7G242500 Prunus persica HOM05D003776 ORTHO05D004459 6.0e-19 98.2 101 55.4
Manes.05G119700 Manihot esculenta HOM05D003776 ORTHO05D004459 7.8e-19 97.8 100 58.0
Thecc.09G126200 Theobroma cacao HOM05D003776 ORTHO05D004459 7.8e-19 97.8 96 56.2
Duzib187G1323 Durio zibethinus HOM05D003776 ORTHO05D004459 1.0e-18 97.4 99 52.5
Lj3g0001115 Lotus japonicus HOM05D003776 ORTHO05D004459 2.3e-18 96.3 99 50.5
Atru.chr7.1164 Acer truncatum HOM05D003776 ORTHO05D004459 3.0e-18 95.9 99 53.5
PSO455G0084 Papaver somniferum HOM05D003776 ORTHO05D004459 3.0e-18 95.9 99 54.5
PSO170G4267 Papaver somniferum HOM05D003776 ORTHO05D004459 6.6e-18 94.7 99 53.5
Sc08g0006640 Simmondsia chinensis HOM05D003776 ORTHO05D004459 6.6e-18 94.7 99 53.5
CARHR118630 Cardamine hirsuta HOM05D003776 ORTHO05D004459 1.1e-17 94.0 100 52.0
Duzib168G2222 Durio zibethinus HOM05D003776 ORTHO05D004459 1.5e-17 93.6 99 53.5
Migut.J01158 Erythranthe guttata HOM05D003776 ORTHO05D004459 1.9e-17 93.2 104 51.9
Eucgr.C04218 Eucalyptus grandis HOM05D003776 ORTHO05D004459 1.9e-17 93.2 97 55.7
Lalb_Chr08g0234811 Lupinus albus HOM05D003776 ORTHO05D004459 1.9e-17 93.2 96 51.0
Potri.006G119600 Populus trichocarpa HOM05D003776 ORTHO05D004459 1.9e-17 93.2 97 54.6
Lalb_Chr11g0072121 Lupinus albus HOM05D003776 ORTHO05D004459 2.5e-17 92.8 99 50.5
Medtr7g099880 Medicago truncatula HOM05D003776 ORTHO05D004459 3.3e-17 92.4 99 48.5
ClCG11G003010 Citrullus lanatus HOM05D003776 ORTHO05D004459 4.3e-17 92.0 98 55.1
FAN26G1438 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.3e-17 92.0 109 49.5
MELO3C004510.2 Cucumis melo HOM05D003776 ORTHO05D004459 5.6e-17 91.7 98 55.1
FAN28G2120 Fragaria x ananassa HOM05D003776 ORTHO05D004459 5.6e-17 91.7 100 51.0
CsaV3_2G002830 Cucumis sativus L. HOM05D003776 ORTHO05D004459 7.3e-17 91.3 98 55.1
FvH4_1g03320 Fragaria vesca HOM05D003776 ORTHO05D004459 7.3e-17 91.3 100 51.0
FAN19G1245 Fragaria x ananassa HOM05D003776 ORTHO05D004459 9.6e-17 90.9 100 51.0
Sed0006794 Sechium edule HOM05D003776 ORTHO05D004459 9.6e-17 90.9 98 53.1
RcHm_v2.0_Chr2g0088511 Rosa chinensis HOM05D003776 ORTHO05D004459 1.3e-16 90.5 100 52.0
Aqoxy7G02178 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 2.1e-16 89.7 96 53.1
Lsat_1_v5_gn_5_96021 Lactuca sativa HOM05D003776 ORTHO05D004459 2.1e-16 89.7 97 48.5
AL8G25470 Arabidopsis lyrata HOM05D003776 ORTHO05D004459 2.8e-16 89.4 100 50.0
Sabra06G0094200 Salix brachista HOM05D003776 ORTHO05D004459 2.8e-16 89.4 98 50.0
AUR62011127 Chenopodium quinoa HOM05D003776 ORTHO05D004459 3.6e-16 89.0 110 44.5
AT5G51200 Arabidopsis thaliana HOM05D003776 ORTHO05D004459 4.8e-16 88.6 100 50.0
AUR62013362 Chenopodium quinoa HOM05D003776 ORTHO05D004459 4.8e-16 88.6 110 44.5
Psat1g024680 Pisum sativum HOM05D003776 ORTHO05D004459 8.1e-16 87.8 102 49.0
THA.LOC104808989 Tarenaya hassleriana HOM05D003776 ORTHO05D004459 1.1e-15 87.4 108 48.1
PGR102G3028 Punica granatum HOM05D003776 ORTHO05D004459 1.4e-15 87.0 99 51.5
Aa31LG5G9110 Aethionema arabicum HOM05D003776 ORTHO05D004459 2.4e-15 86.3 102 47.1
Aqoxy3G01756 Aquilegia oxysepala HOM05D003776 ORTHO05D004459 2.4e-15 86.3 96 52.1
MD02G1032900 Malus domestica HOM05D003776 ORTHO05D004459 2.4e-15 86.3 102 47.1
TPR.G21471 Trifolium pratense HOM05D003776 ORTHO05D004459 2.4e-15 86.3 99 46.5
Thhalv10002339m.g Eutrema salsugineum HOM05D003776 ORTHO05D004459 3.1e-15 85.9 101 49.5
HanXRQChr10g0315491 Helianthus annuus HOM05D003776 ORTHO05D004459 3.1e-15 85.9 103 47.6
Nn8g39448 Nelumbo nucifera HOM05D003776 ORTHO05D004459 3.1e-15 85.9 95 52.6
Sp4g09050 Schrenkiella parvula HOM05D003776 ORTHO05D004459 3.1e-15 85.9 101 50.5
FAN23G1640 Fragaria x ananassa HOM05D003776 ORTHO05D004459 4.0e-15 85.5 100 50.0
A07p17720 Brassica napus HOM05D003776 ORTHO05D004459 5.3e-15 85.1 102 51.0
BraA07t29494Z Brassica rapa HOM05D003776 ORTHO05D004459 5.3e-15 85.1 102 51.0
Glyma.06G222100 Glycine max HOM05D003776 ORTHO05D004459 6.9e-15 84.7 98 49.0
Ca_14403_v3 Cicer arietinum L. HOM05D003776 ORTHO05D004459 1.2e-14 84.0 99 44.4
C07p25670 Brassica napus HOM05D003776 ORTHO05D004459 1.5e-14 83.6 102 50.0
BolC7t43085H Brassica oleracea HOM05D003776 ORTHO05D004459 1.5e-14 83.6 102 50.0
vmacro22117 Vaccinium macrocarpon HOM05D003776 ORTHO05D004459 4.4e-14 82.0 84 53.6
EL10Ac8g18652 Beta vulgaris HOM05D003776 ORTHO05D004459 7.6e-14 81.3 106 40.6
VMungo1309G0107 Vigna mungo HOM05D003776 ORTHO05D004459 7.6e-14 81.3 96 45.8
Phvul.009G198200 Phaseolus vulgaris HOM05D003776 ORTHO05D004459 9.9e-14 80.9 96 44.8
ECA234G1804 Erigeron canadensis HOM05D003776 ORTHO05D004459 1.7e-13 80.1 103 41.7
Carub.0008s1091 Capsella rubella HOM05D003776 ORTHO05D004459 3.8e-13 79.0 100 49.0
Hund09133 Selenicereus undatus HOM05D003776 ORTHO05D004459 8.4e-13 77.8 100 45.0
CDE02G1576 Ceratophyllum demersum HOM05D003776 ORTHO05D004459 1.4e-12 77.0 100 48.0
Os02g0202250 Oryza sativa ssp. japonica HOM05D003776 ORTHO05D004459 4.6e-11 72.0 100 42.0
ATR0322G072 Amborella trichopoda HOM05D003776 ORTHO05D004459 6.0e-11 71.6 94 41.5
Zm00001eb235620 Zea mays HOM05D003776 ORTHO05D004459 8.7e-10 67.8 101 40.6
SEGI_34338 Sequoiadendron giganteum HOM05D003776 ORTHO05D004459 5.6e-09 65.1 96 38.5
HPP92_008667 Vanilla planifolia HOM05D003776 ORTHO05D004459 5.6e-09 65.1 102 38.2
CBR_g37692 Chara braunii HOM05D003776 ORTHO05D004459 2.8e-08 62.8 103 36.9
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis HOM05D003776 ORTHO05D004459 6.2e-08 61.6 84 42.9
Psat0s3979g0040 Pisum sativum HOM05D003776 ORTHO05D004459 2.4e-07 59.7 44 65.9
Pp3c4_20350 Physcomitrium patens HOM05D003776 ORTHO05D004459 3.1e-07 59.3 84 41.7
Actinidia26393 Actinidia chinensis HOM05D003776 ORTHO05D004459 2.0e-06 56.6 95 42.1
Ah.09g226230 Amaranthus hybridus HOM05D003776 ORTHO05D004459 4.5e-06 55.5 55 50.9


User provided reference genes

Program Settings