Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 6.0e-113 411.0 230 100.0
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 8.3e-38 161.4 211 45.0
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-30 136.7 201 43.3
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 3.8e-30 136.0 227 51.5
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 2.7e-28 129.8 213 52.6
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-27 126.7 154 44.8
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-26 124.4 212 53.3
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 1.4e-24 117.5 167 41.9
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-23 114.4 198 52.5
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 3.4e-23 112.8 134 46.3
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 1.3e-22 110.9 169 39.1
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.9e-22 109.8 170 37.6
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 2.7e-20 103.2 153 44.4
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 4.6e-20 102.4 207 39.1
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 6.6e-19 98.6 152 40.1
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 2.8e-17 93.2 138 41.3
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 8.1e-17 91.7 174 33.9
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-16 89.7 152 38.8
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-16 89.7 152 38.8
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-16 89.7 152 38.8
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-16 89.7 152 38.8
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-15 86.7 122 44.3
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 4.5e-15 85.9 149 34.2
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 5.8e-15 85.5 170 32.9
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 1.7e-14 84.0 234 28.6
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 4.9e-14 82.4 172 33.7
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 1.1e-13 81.3 136 36.0
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 1.9e-13 80.5 119 39.5
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 5.4e-13 79.0 149 32.9
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 9.3e-13 78.2 175 30.9
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 9.3e-13 78.2 172 31.4
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 3.5e-12 76.3 161 29.8
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 3.5e-12 76.3 151 33.1
ECA247G1593 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.8e-11 73.9 172 33.7
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.0e-11 73.2 178 31.5
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-11 72.8 83 48.2
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 5.1e-11 72.4 177 29.4
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 8.7e-11 71.6 88 46.6
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 1.9e-10 70.5 148 33.8
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 2.5e-10 70.1 171 29.2
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 1.3e-09 67.8 109 37.6
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 1.6e-09 67.4 171 29.8
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 3.7e-09 66.2 174 28.7
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 6.2e-09 65.5 114 38.6
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 1.1e-08 64.7 157 30.6
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 1.1e-08 64.7 139 33.1
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 1.4e-08 64.3 149 30.2
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 1.8e-08 63.9 148 30.4
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 2.4e-08 63.5 172 26.2
CAN.G955.3 Capsicum annuum HOM05D002125 ORTHO05D002105 3.1e-08 63.2 154 28.6
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 3.1e-08 63.2 178 29.8
Eucgr.K02937 Eucalyptus grandis HOM05D002125 ORTHO05D002105 4.0e-08 62.8 155 27.7
Nn2g11037 Nelumbo nucifera HOM05D002125 ORTHO05D002105 4.0e-08 62.8 155 29.0
FAN02G2848 Fragaria x ananassa HOM05D002125 ORTHO05D002105 5.3e-08 62.4 150 30.0
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 5.3e-08 62.4 107 38.3
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 5.3e-08 62.4 148 31.8
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 6.9e-08 62.0 107 37.4
EL10Ac7g16789 Beta vulgaris HOM05D002125 ORTHO05D002105 9.0e-08 61.6 154 28.6
EL10As8g23828 Beta vulgaris HOM05D002125 ORTHO05D002105 9.0e-08 61.6 154 28.6
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 9.0e-08 61.6 108 35.2
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.2e-07 61.2 162 30.2
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-07 61.2 102 37.3
CSS0047715 Camellia sinensis var. sinensis HOM05D002125 ORTHO05D002105 1.5e-07 60.8 153 26.8
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 2.0e-07 60.5 139 30.9
GSVIVG01024623001 Vitis vinifera HOM05D002125 ORTHO05D002105 2.0e-07 60.5 154 27.3
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 2.6e-07 60.1 168 28.0
Sopen10g027910 Solanum pennellii HOM05D002125 ORTHO05D002105 2.6e-07 60.1 129 31.0
Actinidia29062 Actinidia chinensis HOM05D002125 ORTHO05D002105 3.4e-07 59.7 154 27.9
AUR62026344 Chenopodium quinoa HOM05D002125 ORTHO05D002105 4.5e-07 59.3 149 28.2
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 4.5e-07 59.3 107 35.5
Ah.08g209960 Amaranthus hybridus HOM05D002125 ORTHO05D002105 5.8e-07 58.9 154 27.9
GSVIVG01030257001 Vitis vinifera HOM05D002125 ORTHO05D002105 7.6e-07 58.5 155 28.4
Ah.15g090380 Amaranthus hybridus HOM05D002125 ORTHO05D002105 1.0e-06 58.2 154 27.9
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 1.0e-06 58.2 170 30.0
FAN05G3214 Fragaria x ananassa HOM05D002125 ORTHO05D002105 1.0e-06 58.2 150 29.3
PGSC0003DMG400011864 Solanum tuberosum HOM05D002125 ORTHO05D002105 1.0e-06 58.2 129 29.5
Sc21g0004980 Simmondsia chinensis HOM05D002125 ORTHO05D002105 1.3e-06 57.8 160 28.8
A03p00120 Brassica napus HOM05D002125 ORTHO05D002105 1.7e-06 57.4 162 29.0
C03p00270 Brassica napus HOM05D002125 ORTHO05D002105 1.7e-06 57.4 162 27.8
BraA03t09402Z Brassica rapa HOM05D002125 ORTHO05D002105 1.7e-06 57.4 162 29.0
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 1.7e-06 57.4 148 28.4
Nitab4.5_0003850g0070 Nicotiana tabacum HOM05D002125 ORTHO05D002105 2.2e-06 57.0 129 28.7
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 2.2e-06 57.0 163 27.0
PGR142G1182 Punica granatum HOM05D001818 ORTHO05D001780 2.2e-06 57.0 153 27.5
BcaB01g06117 Brassica carinata HOM05D002125 ORTHO05D002105 2.9e-06 56.6 162 27.8
BolC3t12601H Brassica oleracea HOM05D002125 ORTHO05D002105 2.9e-06 56.6 162 27.8
Nitab4.5_0000355g0180 Nicotiana tabacum HOM05D002125 ORTHO05D002105 2.9e-06 56.6 129 28.7
RcHm_v2.0_Chr3g0461461 Rosa chinensis HOM05D002125 ORTHO05D002105 2.9e-06 56.6 150 29.3
Solyc10g076290.2 Solanum lycopersicum HOM05D002125 ORTHO05D002105 2.9e-06 56.6 129 29.5
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 3.8e-06 56.2 172 26.2
MD12G1181200 Malus domestica HOM05D002125 ORTHO05D002105 4.9e-06 55.8 138 28.3
TAR623G1068 Trochodendron aralioides HOM05D002125 ORTHO05D002105 4.9e-06 55.8 138 27.5
FAN09G3322 Fragaria x ananassa HOM05D002125 ORTHO05D002105 6.4e-06 55.5 150 28.0
Prupe.3G094500 Prunus persica HOM05D001993 ORTHO05D009037 6.4e-06 55.5 141 29.8
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 6.4e-06 55.5 172 23.8


User provided reference genes

Program Settings