Gene: Sopen10g027910

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g027910
  • Transcript Identifier Sopen10g027910.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 75802032-75807276 : positive

Gene Family Information

  • ID HOM05D002125
  • #Genes/#Species 314/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g027910.1

Descriptions

  • Description RNI-like superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity | INVOLVED IN: ubiquitin-dependent protein catabolic process | LOCATED IN: endomembrane system | EXPRESSED IN: 17 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype | BEST Arabidopsis thaliana protein match is: F-box family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006511
ISO
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process AT5G01720
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT5G01720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G01720
GO:0019005
ISO
PLAZA Integrative OrthologySCF ubiquitin ligase complex AT5G01720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001611 Leucine-rich repeat
IPR032675 Leucine-rich repeat domain superfamily
IPR006553 Leucine-rich repeat, cysteine-containing subtype
Mapman id Description
19.2.2.8.1.4.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ubiquitin ligase complexes.F-BOX substrate adaptor activities.substrate adaptor (RAE-like)