Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G4364 Papaver somniferum HOM05D006362 ORTHO05D008295 0.0e+00 1116.7 577 100.0
TAR626G1624 Trochodendron aralioides HOM05D006362 ORTHO05D008295 1.7e-260 902.5 563 81.2
Aqoxy1G03661 Aquilegia oxysepala HOM05D006362 ORTHO05D008295 3.2e-256 888.3 570 80.4
GSVIVG01001989001 Vitis vinifera HOM05D006362 ORTHO05D008295 2.0e-253 879.0 567 79.5
Nn1g07069 Nelumbo nucifera HOM05D006362 ORTHO05D008295 2.2e-252 875.5 548 81.0
Thecc.07G046200 Theobroma cacao HOM05D006362 ORTHO05D008295 2.0e-250 869.0 569 77.9
QL08p012554 Quercus lobata HOM05D006362 ORTHO05D008295 7.7e-250 867.1 570 77.4
Dinv40729 Davidia involucrata HOM05D006362 ORTHO05D008295 1.5e-248 862.8 568 78.0
Gorai.002G084800 Gossypium raimondii HOM05D006362 ORTHO05D008295 7.2e-248 860.5 569 77.2
TWI38G1299 Tripterygium wilfordii HOM05D006362 ORTHO05D008295 2.8e-247 858.6 572 76.7
MD03G1209000 Malus domestica HOM05D006362 ORTHO05D008295 6.1e-247 857.4 563 77.3
Gohir.A01G076501 Gossypium hirsutum HOM05D006362 ORTHO05D008295 1.0e-246 856.7 569 76.6
Potri.011G135800 Populus trichocarpa HOM05D006362 ORTHO05D008295 5.2e-246 854.4 574 77.2
Atru.chr2.3247 Acer truncatum HOM05D006362 ORTHO05D008295 1.2e-245 853.2 567 77.2
MELO3C018085.2 Cucumis melo HOM05D006362 ORTHO05D008295 2.0e-245 852.4 567 75.7
Sed0025840 Sechium edule HOM05D006362 ORTHO05D008295 3.4e-245 851.7 567 75.1
Duzib268G0905 Durio zibethinus HOM05D006362 ORTHO05D008295 5.7e-245 850.9 568 76.9
CsaV3_1G044730 Cucumis sativus L. HOM05D006362 ORTHO05D008295 2.2e-244 849.0 567 75.7
Cfa020397 Carpinus fangiana HOM05D006362 ORTHO05D008295 1.8e-243 845.9 635 69.8
Prupe.4G206200 Prunus persica HOM05D006362 ORTHO05D008295 4.1e-243 844.7 551 78.2
Eucgr.F03442 Eucalyptus grandis HOM05D006362 ORTHO05D008295 7.0e-243 844.0 567 77.1
Ciclev10007871m.g Citrus clementina HOM05D006362 ORTHO05D008295 3.5e-242 841.6 567 75.8
Gohir.D01G064000 Gossypium hirsutum HOM05D006362 ORTHO05D008295 5.9e-242 840.9 569 75.9
Hma1.2p1_1344F.1_g277040 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 1.3e-241 839.7 561 77.4
ATR0697G203 Amborella trichopoda HOM05D006362 ORTHO05D008295 3.8e-241 838.2 562 76.9
CANSAT11G0353 Cannabis sativa HOM05D006362 ORTHO05D008295 3.8e-241 838.2 568 75.7
Manes.15G074800 Manihot esculenta HOM05D006362 ORTHO05D008295 3.8e-241 838.2 568 75.0
Lalb_Chr03g0030071 Lupinus albus HOM05D006362 ORTHO05D008295 8.6e-241 837.0 564 74.5
FvH4_4g07170 Fragaria vesca HOM05D006362 ORTHO05D008295 1.5e-240 836.3 568 75.9
FAN12G0341 Fragaria x ananassa HOM05D006362 ORTHO05D008295 2.5e-240 835.5 568 75.9
RcHm_v2.0_Chr4g0399351 Rosa chinensis HOM05D006362 ORTHO05D008295 4.3e-240 834.7 572 75.3
TPR.G25875 Trifolium pratense HOM05D006362 ORTHO05D008295 1.4e-238 829.7 563 75.0
Sc14g0006480 Simmondsia chinensis HOM05D006362 ORTHO05D008295 4.0e-238 828.2 573 74.9
THA.LOC104818092 Tarenaya hassleriana HOM05D006362 ORTHO05D008295 8.9e-238 827.0 565 74.7
FAN22G0212 Fragaria x ananassa HOM05D006362 ORTHO05D008295 7.5e-237 823.9 578 74.0
Lj3g0015245 Lotus japonicus HOM05D006362 ORTHO05D008295 2.2e-236 822.4 566 74.2
arahy.Tifrunner.gnm1.ann1.Z96I2W Arachis hypogaea HOM05D006362 ORTHO05D008295 6.4e-236 820.8 565 72.7
Medtr4g081050 Medicago truncatula HOM05D006362 ORTHO05D008295 8.3e-236 820.5 563 74.1
Haze_09637 Corylus avellana HOM05D006362 ORTHO05D008295 1.2e-234 816.6 627 69.4
Glyma.06G271800 Glycine max HOM05D006362 ORTHO05D008295 1.2e-234 816.6 565 74.5
Psat7g162880 Pisum sativum HOM05D006362 ORTHO05D008295 1.7e-233 812.8 563 73.5
HPP92_009387 Vanilla planifolia HOM05D006362 ORTHO05D008295 2.3e-233 812.4 565 73.8
Nitab4.5_0002342g0020 Nicotiana tabacum HOM05D006362 ORTHO05D008295 6.6e-233 810.8 564 74.1
Oeu021406.2 Olea europaea HOM05D006362 ORTHO05D008295 2.5e-232 808.9 566 72.1
Phvul.011G136800 Phaseolus vulgaris HOM05D006362 ORTHO05D008295 2.1e-231 805.8 550 74.7
Cc05_g13400 Coffea canephora HOM05D006362 ORTHO05D008295 6.2e-231 804.3 565 74.2
Thhalv10020417m.g Eutrema salsugineum HOM05D006362 ORTHO05D008295 2.3e-230 802.4 565 73.3
BolC3t17030H Brassica oleracea HOM05D006362 ORTHO05D008295 4.4e-229 798.1 565 73.3
HanXRQChr13g0407741 Helianthus annuus HOM05D006362 ORTHO05D008295 9.8e-229 797.0 565 71.7
Solyc10g006410.3 Solanum lycopersicum HOM05D006362 ORTHO05D008295 2.9e-228 795.4 566 72.3
C03p47540 Brassica napus HOM05D006362 ORTHO05D008295 8.3e-228 793.9 565 72.9
BraA03t13067Z Brassica rapa HOM05D006362 ORTHO05D008295 8.3e-228 793.9 565 72.7
Sopen10g002360 Solanum pennellii HOM05D006362 ORTHO05D008295 8.3e-228 793.9 566 72.3
AT3G15160 Arabidopsis thaliana HOM05D006362 ORTHO05D008295 1.1e-227 793.5 566 72.6
Carub.0003s1481 Capsella rubella HOM05D006362 ORTHO05D008295 1.1e-227 793.5 566 72.8
Ca_18860_v3 Cicer arietinum L. HOM05D006362 ORTHO05D008295 1.9e-227 792.7 550 73.3
CAN.G1781.12 Capsicum annuum HOM05D006362 ORTHO05D008295 2.4e-227 792.3 568 72.4
ECA240G1610 Erigeron canadensis HOM05D006362 ORTHO05D008295 3.2e-227 792.0 575 71.3
A03p39180 Brassica napus HOM05D006362 ORTHO05D008295 5.4e-227 791.2 565 72.6
arahy.Tifrunner.gnm1.ann1.GJJ2CM Arachis hypogaea HOM05D006362 ORTHO05D008295 9.2e-227 790.4 562 71.2
AL3G27550 Arabidopsis lyrata HOM05D006362 ORTHO05D008295 1.2e-226 790.0 566 72.8
Sp3g13370 Schrenkiella parvula HOM05D006362 ORTHO05D008295 1.2e-226 790.0 566 72.3
CARHR090140 Cardamine hirsuta HOM05D006362 ORTHO05D008295 3.5e-226 788.5 565 72.6
Aa31LG8G2360 Aethionema arabicum HOM05D006362 ORTHO05D008295 7.8e-226 787.3 566 71.4
DCAR_022536 Daucus carota HOM05D006362 ORTHO05D008295 7.8e-226 787.3 585 70.3
Gorai.009G425700 Gossypium raimondii HOM05D006362 ORTHO05D008295 1.3e-225 786.6 565 71.5
PGR031G2573 Punica granatum HOM05D006362 ORTHO05D008295 1.1e-224 783.5 554 73.3
CDE05G0917 Ceratophyllum demersum HOM05D006362 ORTHO05D008295 3.6e-223 778.5 553 73.4
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 4.0e-222 775.0 567 71.3
Ah.06g182950 Amaranthus hybridus HOM05D006362 ORTHO05D008295 2.9e-220 768.8 576 68.8
BcaC01g03890 Brassica carinata HOM05D006362 ORTHO05D008295 4.1e-219 765.0 587 68.7
ClCG05G014560 Citrullus lanatus HOM05D006362 ORTHO05D008295 1.6e-218 763.1 585 69.1
AUR62020525 Chenopodium quinoa HOM05D006362 ORTHO05D008295 2.7e-218 762.3 552 71.4
Rhsim06G0213400 Rhododendron simsii HOM05D006362 ORTHO05D008295 6.0e-218 761.1 609 68.5
Peaxi162Scf00387g00613 Petunia axillaris HOM05D006362 ORTHO05D008295 6.2e-215 751.1 564 69.9
SGA_v2.0_scaffold80G25930 Striga asiatica HOM05D006362 ORTHO05D008295 1.5e-213 746.5 566 68.0
Os04g0626900 Oryza sativa ssp. japonica HOM05D006362 ORTHO05D008295 2.2e-212 742.7 564 66.1
Gohir.A04G020300 Gossypium hirsutum HOM05D006362 ORTHO05D008295 2.9e-212 742.3 565 68.8
EL10Ac4g07932 Beta vulgaris HOM05D006362 ORTHO05D008295 3.2e-211 738.8 575 68.0
Lj1C868T5 Lonicera japonica HOM05D006362 ORTHO05D008295 2.3e-209 732.6 539 72.5
AUR62015672 Chenopodium quinoa HOM05D006362 ORTHO05D008295 3.0e-209 732.3 578 66.8
Migut.M01793 Erythranthe guttata HOM05D006362 ORTHO05D008295 9.0e-206 720.7 562 66.2
FAN17G1244 Fragaria x ananassa HOM05D006362 ORTHO05D008295 4.4e-205 718.4 576 66.8
Nitab4.5_0002229g0190 Nicotiana tabacum HOM05D006362 ORTHO05D008295 1.3e-204 716.8 585 66.3
Lsat_1_v5_gn_5_81640 Lactuca sativa HOM05D006362 ORTHO05D008295 3.8e-204 715.3 549 68.5
Sabra11G0122000 Salix brachista HOM05D006362 ORTHO05D008295 1.1e-203 713.8 616 64.6
Hund23291 Selenicereus undatus HOM05D006362 ORTHO05D008295 1.2e-189 667.2 513 67.6
CiPaw.11G185900 Carya illinoinensis HOM05D006362 ORTHO05D008295 7.6e-189 664.5 428 79.2
Mapoly0021s0009 Marchantia polymorpha HOM05D006362 ORTHO05D008295 6.3e-175 618.2 566 58.7
Gohir.D05G366200 Gossypium hirsutum HOM05D006362 ORTHO05D008295 7.2e-171 604.7 425 72.9
vmacro11753 Vaccinium macrocarpon HOM05D006362 ORTHO05D008295 4.3e-168 595.5 689 50.8
Pp3c24_12510 Physcomitrium patens HOM05D006362 ORTHO05D008295 3.7e-167 592.4 570 55.6
SMO115G0345 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 9.1e-158 561.2 563 55.4
AagrBONN_evm.TU.Sc2ySwM_117.2426 Anthoceros agrestis HOM05D006362 ORTHO05D008295 3.0e-153 546.2 566 52.5
Pp3c23_6050 Physcomitrium patens HOM05D006362 ORTHO05D008295 7.5e-144 515.0 559 53.0
BolC3t17019H Brassica oleracea HOM05D006362 ORTHO05D008295 1.0e-116 424.9 321 70.4
HPP92_009392 Vanilla planifolia HOM05D006362 ORTHO05D008295 1.9e-107 394.0 275 73.5
PGSC0003DMG403014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 2.5e-107 393.7 274 73.0
Zm00001eb070060 Zea mays HOM05D006362 ORTHO05D008295 1.0e-92 345.1 284 62.7
CSS0013960 Camellia sinensis var. sinensis HOM05D006362 ORTHO05D008295 2.4e-89 334.0 221 78.3
PGSC0003DMG402014396 Solanum tuberosum HOM05D006362 ORTHO05D008295 3.2e-70 270.4 197 70.1
SEGI_18975 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 1.4e-57 228.4 163 71.2
Rhsim12G0205700 Rhododendron simsii HOM05D006362 ORTHO05D008295 3.6e-53 213.8 294 50.0
CBR_g57499 Chara braunii HOM05D006362 ORTHO05D008295 3.1e-49 200.7 240 43.8
Gorai.002G084600 Gossypium raimondii HOM05D006362 ORTHO05D008295 8.2e-42 176.0 120 70.0
Gohir.D01G063866 Gossypium hirsutum HOM05D006362 ORTHO05D008295 4.5e-40 170.2 120 68.3
SHI31860 Sapria himalayana HOM05D006362 ORTHO05D008295 1.7e-39 168.3 143 60.8
Cpa.g.sc131.92 Carica papaya HOM05D006362 ORTHO05D008295 1.4e-38 165.2 114 71.9
SEGI_13710 Sequoiadendron giganteum HOM05D006362 ORTHO05D008295 1.3e-34 152.1 132 55.3
VMungo0251G2436 Vigna mungo HOM05D006362 ORTHO05D008295 3.5e-32 144.1 118 66.1
Hma1.2p1_1609F.1_g293480 Hydrangea macrophylla HOM05D006362 ORTHO05D008295 8.5e-31 139.4 182 50.0
HPP92_009393 Vanilla planifolia HOM05D006362 ORTHO05D008295 2.9e-23 114.4 93 61.3
SMO347G0562 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 9.4e-22 109.4 180 38.9
SMO228G0126 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 5.7e-19 100.1 189 36.0
CBR_g57501 Chara braunii HOM05D006362 ORTHO05D008295 8.3e-18 96.3 122 45.1
HanXRQChr16g0507081 Helianthus annuus HOM05D006362 ORTHO05D008295 3.3e-14 84.3 83 59.0
SMO167G0061 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 4.7e-13 80.5 146 38.4
SMO111G0176 Selaginella moellendorffii HOM05D013632 ORTHO05D008295 8.0e-13 79.7 96 42.7
Cc02_g13940 Coffea canephora HOM05D006362 ORTHO05D008295 4.4e-11 73.9 55 72.7
BcaB04g20946 Brassica carinata HOM05D006362 ORTHO05D008295 1.7e-10 72.0 45 73.3
Cpa.g.sc131.91 Carica papaya HOM05D006362 ORTHO05D116658 1.6e-08 65.5 39 82.1
SMO118G0508 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 5.9e-08 63.5 208 28.4
SMO122G0015 Selaginella moellendorffii HOM05D006362 ORTHO05D374567 7.8e-08 63.2 96 36.5
SMO014G0021 Selaginella moellendorffii HOM05D006362 ORTHO05D008295 1.7e-07 62.0 176 29.5
SMO009G0006 Selaginella moellendorffii HOM05D013632 ORTHO05D379378 1.5e-06 58.9 136 31.6


User provided reference genes

Program Settings