Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 6.2e-174 614.0 305 100.0
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 3.8e-163 578.2 305 96.1
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 3.2e-101 372.5 263 71.5
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 5.4e-101 371.7 239 79.1
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 4.3e-98 362.1 233 78.5
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 7.3e-98 361.3 273 67.0
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 1.6e-97 360.1 224 79.9
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 6.2e-97 358.2 294 63.6
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 8.1e-97 357.8 252 73.0
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 2.3e-96 356.3 258 69.4
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 3.1e-96 355.9 268 69.8
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 3.1e-96 355.9 313 62.9
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 6.8e-96 354.8 299 64.5
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 8.9e-96 354.4 252 73.8
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 1.2e-95 354.0 296 64.9
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 4.4e-95 352.1 228 77.2
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 7.5e-95 351.3 242 74.4
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 1.7e-94 350.1 225 77.8
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 1.7e-94 350.1 233 75.1
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 1.7e-94 350.1 269 69.5
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 2.2e-94 349.7 238 73.9
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 2.2e-94 349.7 242 73.1
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 3.7e-94 349.0 225 77.8
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 4.9e-94 348.6 227 76.2
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 8.3e-94 347.8 292 64.0
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 1.4e-93 347.1 245 73.5
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 1.9e-93 346.7 284 65.5
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 5.4e-93 345.1 243 70.8
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 7.1e-93 344.7 216 77.3
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 7.1e-93 344.7 216 79.6
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 7.1e-93 344.7 266 66.5
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 9.2e-93 344.4 288 64.6
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 1.2e-92 344.0 288 64.6
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 1.6e-92 343.6 278 66.5
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 1.6e-92 343.6 278 65.8
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 2.7e-92 342.8 239 74.1
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 2.7e-92 342.8 297 62.3
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 3.5e-92 342.4 239 72.0
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 4.6e-92 342.0 226 76.1
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 1.0e-91 340.9 268 68.7
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 1.3e-91 340.5 214 77.1
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 1.7e-91 340.1 269 65.8
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 1.7e-91 340.1 243 71.2
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 2.3e-91 339.7 221 74.2
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 2.3e-91 339.7 219 76.3
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 3.9e-91 339.0 219 75.8
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 5.1e-91 338.6 247 70.4
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 5.1e-91 338.6 219 75.8
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 6.6e-91 338.2 217 77.4
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 6.6e-91 338.2 211 79.1
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 1.1e-90 337.4 270 65.6
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 1.5e-90 337.0 249 70.7
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 1.5e-90 337.0 269 65.4
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 1.9e-90 336.7 285 62.8
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 3.3e-90 335.9 218 76.6
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 4.3e-90 335.5 240 70.4
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 4.3e-90 335.5 274 62.0
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 5.6e-90 335.1 306 61.1
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 5.6e-90 335.1 247 68.8
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 7.3e-90 334.7 224 76.3
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 9.5e-90 334.3 297 60.3
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 1.6e-89 333.6 205 82.0
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 6.2e-89 331.6 223 74.4
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 1.1e-88 330.9 229 72.1
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 1.1e-88 330.9 241 68.5
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 1.1e-88 330.9 216 75.9
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 1.4e-88 330.5 307 62.2
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 1.4e-88 330.5 215 75.8
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 2.3e-88 329.7 219 74.9
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 3.1e-88 329.3 217 76.0
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 8.9e-88 327.8 242 68.6
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 2.6e-87 326.2 213 77.5
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 2.6e-87 326.2 208 78.8
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 5.8e-87 325.1 223 74.4
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 1.3e-86 323.9 249 69.1
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 1.7e-86 323.6 322 57.1
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 1.1e-85 320.9 238 68.1
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 1.2e-84 317.4 229 70.3
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 1.2e-84 317.4 204 75.0
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 1.6e-84 317.0 227 70.5
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 6.0e-84 315.1 214 75.2
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 1.7e-83 313.5 234 70.1
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 4.7e-81 305.4 230 66.1
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 8.1e-81 304.7 243 63.4
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 1.4e-80 303.9 228 68.0
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 8.9e-80 301.2 216 69.9
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 2.0e-79 300.1 232 67.2
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 2.1e-76 290.0 205 72.2
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 3.0e-75 286.2 174 82.8
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 1.9e-74 283.5 214 66.8
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 2.5e-74 283.1 181 79.6
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 2.1e-73 280.0 225 65.3
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 1.1e-72 277.7 224 63.8
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 3.1e-72 276.2 216 65.7
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 9.9e-71 271.2 285 55.4
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 1.3e-70 270.8 233 60.5
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 1.2e-68 264.2 205 62.4
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 1.8e-67 260.4 231 58.4
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 5.3e-64 248.8 228 57.5
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 5.3e-64 248.8 163 74.2
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 1.7e-62 243.8 227 56.4
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 4.3e-58 229.2 227 57.3
ClCG11G014010 Citrullus lanatus HOM05D006435 ORTHO05D008262 5.3e-56 222.2 314 47.8
MBI01_g28043_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 2.5e-50 203.4 215 55.3
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 4.3e-50 202.6 155 64.5
Ca_12811_v3 Cicer arietinum L. HOM05D006435 ORTHO05D008262 1.2e-47 194.5 140 74.3
Peaxi162Scf00523g00529 Petunia axillaris HOM05D006435 ORTHO05D008262 2.6e-47 193.4 135 72.6
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 2.5e-45 186.8 199 47.7
Glyma.14G141900 Glycine max HOM05D006435 ORTHO05D008262 9.3e-45 184.9 103 90.3
Sabra18G0038100 Salix brachista HOM05D006435 ORTHO05D008262 1.1e-37 161.4 123 71.5
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 1.6e-36 157.5 193 43.5
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 1.6e-36 157.5 181 45.3
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 1.8e-35 154.1 189 42.9
A02p39610 Brassica napus HOM05D006435 ORTHO05D008262 9.7e-34 148.3 152 50.7
Peaxi162Scf00523g00528 Petunia axillaris HOM05D006435 ORTHO05D008262 6.9e-32 142.1 85 72.9
FAN15G2703 Fragaria x ananassa HOM05D006435 ORTHO05D008262 1.7e-25 120.9 71 70.4
Solyc10g012295.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 4.8e-25 119.4 91 69.2
PSO832G3154 Papaver somniferum HOM05D006435 ORTHO05D008262 2.0e-23 114.0 202 35.6
MD08G1118500 Malus domestica HOM05D006435 ORTHO05D008262 1.9e-21 107.5 87 64.4
MBI01_g46977_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 9.1e-16 88.6 76 65.8
Cre11.g467648 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D143948 2.3e-11 73.9 107 35.5
Ca_12801_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 3.4e-10 70.1 96 40.6
Glyma.14G142000 Glycine max HOM05D006435 ORTHO05D008262 7.5e-10 68.9 69 50.7
Cre12.g546200 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D146483 2.8e-09 67.0 177 29.4
Haze_21850 Corylus avellana HOM05D006435 ORTHO05D008262 1.2e-07 61.6 53 54.7
Ca_10788_v3 Cicer arietinum L. HOM05D000659 ORTHO05D000505 2.7e-07 60.5 153 31.4
Lalb_Chr22g0350911 Lupinus albus HOM05D000659 ORTHO05D000505 4.5e-07 59.7 191 30.4
Os04g0569300 Oryza sativa ssp. japonica HOM05D000659 ORTHO05D000505 7.7e-07 58.9 169 27.8
Lalb_Chr14g0373771 Lupinus albus HOM05D000659 ORTHO05D000505 1.0e-06 58.5 91 39.6
Medtr2g103600 Medicago truncatula HOM05D000659 ORTHO05D000505 1.3e-06 58.2 93 39.8
AUR62001774 Chenopodium quinoa HOM05D000659 ORTHO05D000505 1.7e-06 57.8 147 29.3
AUR62009562 Chenopodium quinoa HOM05D000659 ORTHO05D000505 1.7e-06 57.8 161 28.0
Lalb_Chr03g0034381 Lupinus albus HOM05D000659 ORTHO05D000505 2.3e-06 57.4 151 29.1
Peaxi162Scf01327g00137 Petunia axillaris HOM05D007017 ORTHO05D008784 2.9e-06 57.0 252 23.4
BraA10t44950Z Brassica rapa HOM05D000659 ORTHO05D000505 3.8e-06 56.6 151 31.8
FAN06G1231 Fragaria x ananassa HOM05D000659 ORTHO05D000505 3.8e-06 56.6 151 27.8
Cre03.g144084 Chlamydomonas reinhardtii HOM05D000659 ORTHO05D000505 5.0e-06 56.2 146 29.5
Lalb_Chr19g0130981 Lupinus albus HOM05D000659 ORTHO05D000505 5.0e-06 56.2 151 28.5
vmacro20163 Vaccinium macrocarpon HOM05D000659 ORTHO05D000505 5.0e-06 56.2 144 31.9
A10p29020 Brassica napus HOM05D000659 ORTHO05D000505 6.5e-06 55.8 151 31.1
SGA_v2.0_scaffold110G31298 Striga asiatica HOM05D007004 ORTHO05D009040 6.5e-06 55.8 217 27.6
BcaB01g06352 Brassica carinata HOM05D000659 ORTHO05D000505 8.6e-06 55.5 151 30.5
BcaC06g32457 Brassica carinata HOM05D000659 ORTHO05D000505 8.6e-06 55.5 151 30.5
C09p69380 Brassica napus HOM05D000659 ORTHO05D000505 8.6e-06 55.5 151 31.1
BolC9t59682H Brassica oleracea HOM05D000659 ORTHO05D000505 8.6e-06 55.5 151 31.1
Hund04948 Selenicereus undatus HOM05D000659 ORTHO05D000505 8.6e-06 55.5 147 29.3
SEGI_21055 Sequoiadendron giganteum HOM05D000659 ORTHO05D000505 8.6e-06 55.5 140 30.0


User provided reference genes

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