Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G3154 Papaver somniferum HOM05D006435 ORTHO05D008262 1.6e-152 542.7 272 100.0
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 4.2e-73 278.9 309 51.8
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 1.9e-49 200.3 303 42.6
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 9.9e-30 134.8 201 41.8
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 3.8e-29 132.9 192 41.1
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 3.8e-29 132.9 192 41.7
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 8.4e-29 131.7 195 38.5
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 1.9e-28 130.6 197 40.1
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 1.9e-28 130.6 192 40.6
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 3.2e-28 129.8 195 39.5
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 4.2e-28 129.4 197 40.6
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 7.1e-28 128.6 202 39.1
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 7.1e-28 128.6 197 38.6
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 7.1e-28 128.6 242 36.0
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 1.2e-27 127.9 197 38.1
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 1.6e-27 127.5 197 40.1
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 2.7e-27 126.7 174 42.0
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 2.7e-27 126.7 197 37.1
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 2.7e-27 126.7 196 39.3
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 2.7e-27 126.7 197 40.1
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 4.6e-27 125.9 195 39.0
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 4.6e-27 125.9 227 37.0
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 6.0e-27 125.6 198 35.9
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 1.0e-26 124.8 197 38.1
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 1.3e-26 124.4 196 38.8
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 1.3e-26 124.4 201 38.8
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 1.3e-26 124.4 194 38.7
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 1.3e-26 124.4 194 38.7
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 1.3e-26 124.4 207 36.7
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 1.3e-26 124.4 203 37.9
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 1.3e-26 124.4 201 40.8
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 1.7e-26 124.0 194 39.7
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 1.7e-26 124.0 202 38.6
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 1.7e-26 124.0 197 38.6
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 1.7e-26 124.0 192 38.0
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 2.3e-26 123.6 194 39.2
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 3.0e-26 123.2 194 38.1
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 3.0e-26 123.2 199 37.7
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 5.1e-26 122.5 197 37.6
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 6.6e-26 122.1 201 38.8
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 6.6e-26 122.1 194 39.2
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 6.6e-26 122.1 197 36.5
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 8.7e-26 121.7 225 35.1
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 8.7e-26 121.7 195 39.0
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 8.7e-26 121.7 197 37.6
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 8.7e-26 121.7 215 36.3
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 8.7e-26 121.7 197 37.1
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 8.7e-26 121.7 192 39.1
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 8.7e-26 121.7 196 35.7
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 8.7e-26 121.7 194 40.2
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 1.1e-25 121.3 204 36.3
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 1.1e-25 121.3 194 38.7
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 1.5e-25 120.9 199 38.2
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 1.5e-25 120.9 195 39.0
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 1.9e-25 120.6 197 36.5
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 1.9e-25 120.6 197 35.5
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 1.9e-25 120.6 229 34.5
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 1.9e-25 120.6 197 37.1
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 3.3e-25 119.8 194 38.1
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 3.3e-25 119.8 197 35.5
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 3.3e-25 119.8 194 37.1
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 5.6e-25 119.0 194 37.1
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 7.3e-25 118.6 194 36.1
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 1.3e-24 117.9 189 38.1
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 1.3e-24 117.9 197 37.6
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 1.6e-24 117.5 195 36.9
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 1.6e-24 117.5 194 37.6
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 2.1e-24 117.1 232 32.8
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 2.1e-24 117.1 194 37.1
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 2.8e-24 116.7 194 37.6
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 2.8e-24 116.7 197 36.0
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 4.8e-24 115.9 197 34.5
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 6.2e-24 115.5 194 36.6
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 6.2e-24 115.5 197 34.0
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 6.2e-24 115.5 194 36.1
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 8.1e-24 115.2 201 36.3
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 8.1e-24 115.2 194 36.6
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 8.1e-24 115.2 202 35.6
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 8.1e-24 115.2 194 38.1
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 1.4e-23 114.4 202 35.6
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 2.4e-23 113.6 214 32.2
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 2.4e-23 113.6 194 36.6
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 3.1e-23 113.2 194 36.6
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 3.1e-23 113.2 189 36.0
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 5.3e-23 112.5 194 35.6
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 9.0e-23 111.7 157 40.8
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 9.0e-23 111.7 177 39.5
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 3.4e-22 109.8 210 31.9
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 2.2e-21 107.1 212 32.5
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 3.8e-21 106.3 216 32.9
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 4.9e-21 105.9 189 36.5
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 8.4e-21 105.1 196 35.2
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 1.9e-20 104.0 178 36.5
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 2.7e-19 100.1 197 32.5
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 1.0e-18 98.2 202 31.7
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 1.9e-17 94.0 195 32.8
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 1.9e-17 94.0 209 30.1
Peaxi162Scf00523g00528 Petunia axillaris HOM05D006435 ORTHO05D008262 1.9e-17 94.0 72 59.7
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 1.9e-17 94.0 142 38.0
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 2.1e-16 90.5 175 37.7
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 3.6e-16 89.7 204 31.4
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 8.1e-16 88.6 208 32.2
A02p39610 Brassica napus HOM05D006435 ORTHO05D008262 1.8e-15 87.4 66 56.1
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 6.9e-15 85.5 184 33.7
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 2.6e-14 83.6 154 37.7
FAN15G2703 Fragaria x ananassa HOM05D006435 ORTHO05D008262 5.8e-14 82.4 82 42.7
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 2.2e-13 80.5 182 33.0
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 8.4e-13 78.6 177 33.9
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 1.8e-10 70.9 158 34.2
MBI01_g28043_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 3.9e-10 69.7 212 31.1
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 1.4e-07 61.2 183 26.8
Peaxi162Scf00523g00529 Petunia axillaris HOM05D006435 ORTHO05D008262 5.3e-07 59.3 86 41.9
Ca_12811_v3 Cicer arietinum L. HOM05D006435 ORTHO05D008262 6.9e-07 58.9 91 40.7
Sabra18G0038100 Salix brachista HOM05D006435 ORTHO05D008262 1.5e-06 57.8 91 37.4
ClCG11G014010 Citrullus lanatus HOM05D006435 ORTHO05D008262 2.0e-06 57.4 91 37.4
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 2.6e-06 57.0 195 24.6


User provided reference genes

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