Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2112 Papaver somniferum HOM05D006920 ORTHO05D005895 0.0e+00 1091.6 807 100.0
PSO063G3291 Papaver somniferum HOM05D006920 ORTHO05D005895 1.8e-244 849.7 807 79.8
PSO384G1468 Papaver somniferum HOM05D006920 ORTHO05D005895 4.0e-188 662.5 865 62.4
PSO675G1220 Papaver somniferum HOM05D006920 ORTHO05D005895 3.2e-36 157.9 125 66.4
Nn6g35509 Nelumbo nucifera HOM05D006920 ORTHO05D005895 2.8e-32 144.8 428 37.6
ClCG11G016050 Citrullus lanatus HOM05D006920 ORTHO05D005895 9.1e-23 113.2 231 48.9
CsaV3_4G027920 Cucumis sativus L. HOM05D006920 ORTHO05D005895 1.2e-22 112.8 226 49.6
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 1.2e-22 112.8 925 25.6
Nitab4.5_0005104g0050 Nicotiana tabacum HOM05D006920 ORTHO05D005895 1.6e-22 112.5 240 50.4
MBI04_g34755_MAGBIO Magnolia biondii HOM05D006920 ORTHO05D005895 2.7e-22 111.7 232 45.3
Nitab4.5_0008077g0010 Nicotiana tabacum HOM05D006920 ORTHO05D005895 4.5e-22 110.9 240 50.4
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 1.1e-20 106.3 230 48.7
HPP92_005499 Vanilla planifolia HOM05D006920 ORTHO05D005895 1.9e-20 105.5 232 40.1
Sed0019505 Sechium edule HOM05D006920 ORTHO05D005895 5.5e-20 104.0 226 46.5
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 2.8e-19 101.7 239 45.2
RcHm_v2.0_Chr3g0459471 Rosa chinensis HOM05D006920 ORTHO05D005895 2.8e-19 101.7 213 46.5
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 6.1e-19 100.5 221 49.3
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 2.3e-18 98.6 245 40.4
Hund06669 Selenicereus undatus HOM05D006920 ORTHO05D005895 2.3e-18 98.6 197 47.2
Sp6g18630 Schrenkiella parvula HOM05D010535 ORTHO05D005895 3.0e-18 98.2 255 36.5
PGSC0003DMG400014565 Solanum tuberosum HOM05D006920 ORTHO05D005895 3.0e-18 98.2 219 44.7
RcHm_v2.0_Chr2g0093651 Rosa chinensis HOM05D006920 ORTHO05D005895 6.8e-18 97.1 240 42.1
Sed0003269 Sechium edule HOM05D006920 ORTHO05D005895 6.8e-18 97.1 229 47.6
ATR0178G033 Amborella trichopoda HOM05D006920 ORTHO05D005895 8.9e-18 96.7 209 37.8
Carub.0008s1741 Capsella rubella HOM05D010535 ORTHO05D005895 8.9e-18 96.7 239 36.4
Aqoxy7G02156 Aquilegia oxysepala HOM05D006920 ORTHO05D005895 1.5e-17 95.9 226 42.0
AT5G56930 Arabidopsis thaliana HOM05D010535 ORTHO05D005895 2.0e-17 95.5 236 37.7
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 2.0e-17 95.5 210 46.7
CDE04G1224 Ceratophyllum demersum HOM05D006920 ORTHO05D005895 4.4e-17 94.4 212 47.2
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 7.5e-17 93.6 430 30.7
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 7.5e-17 93.6 201 45.8
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 7.5e-17 93.6 110 64.5
CDE06G2477 Ceratophyllum demersum HOM05D002968 ORTHO05D005895 2.2e-16 92.0 180 48.9
Thhalv10012834m.g Eutrema salsugineum HOM05D010535 ORTHO05D005895 2.2e-16 92.0 231 42.4
CARHR270670 Cardamine hirsuta HOM05D010535 ORTHO05D005895 2.8e-16 91.7 251 41.0
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 3.7e-16 91.3 330 33.3
AL8G32790 Arabidopsis lyrata HOM05D010535 ORTHO05D005895 6.3e-16 90.5 229 37.6
Phvul.010G094400 Phaseolus vulgaris HOM05D006920 ORTHO05D005895 6.3e-16 90.5 233 43.3
SGA_v2.0_scaffold4G02308 Striga asiatica HOM05D006920 ORTHO05D005895 6.3e-16 90.5 203 45.8
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 8.3e-16 90.1 194 49.0
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 8.3e-16 90.1 118 59.3
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 8.3e-16 90.1 258 43.8
MSTRG.19500 Avicennia marina HOM05D006920 ORTHO05D005895 1.4e-15 89.4 122 58.2
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 1.4e-15 89.4 223 42.6
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 1.4e-15 89.4 192 50.5
Solyc05g009350.4 Solanum lycopersicum HOM05D006920 ORTHO05D005895 2.4e-15 88.6 232 42.7
FAN26G1238 Fragaria x ananassa HOM05D006920 ORTHO05D005895 3.2e-15 88.2 194 49.0
FAN26G3372 Fragaria x ananassa HOM05D006920 ORTHO05D005895 3.2e-15 88.2 194 49.0
ECA233G4205 Erigeron canadensis HOM05D006920 ORTHO05D005895 5.4e-15 87.4 250 41.6
FAN23G0431 Fragaria x ananassa HOM05D006920 ORTHO05D005895 5.4e-15 87.4 193 48.7
Psat5g132560 Pisum sativum HOM05D006920 ORTHO05D005895 9.2e-15 86.7 200 45.5
TPR.G14423 Trifolium pratense HOM05D006920 ORTHO05D005895 1.6e-14 85.9 230 40.4
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 2.0e-14 85.5 229 45.4
BcaC03g14196 Brassica carinata HOM05D010535 ORTHO05D005895 3.5e-14 84.7 225 35.6
C02p14780 Brassica napus HOM05D010535 ORTHO05D005895 3.5e-14 84.7 225 35.6
BolC2t07607H Brassica oleracea HOM05D010535 ORTHO05D005895 3.5e-14 84.7 225 35.6
FAN28G2753 Fragaria x ananassa HOM05D006920 ORTHO05D005895 3.5e-14 84.7 191 48.2
Lj4A292T33 Lonicera japonica HOM05D006920 ORTHO05D005895 3.5e-14 84.7 239 39.7
Gohir.D05G032000 Gossypium hirsutum HOM05D006920 ORTHO05D005895 4.5e-14 84.3 128 55.5
Gorai.009G032200 Gossypium raimondii HOM05D006920 ORTHO05D005895 4.5e-14 84.3 121 57.0
Sopen05g005130 Solanum pennellii HOM05D006920 ORTHO05D005895 5.9e-14 84.0 231 41.1
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 7.8e-14 83.6 242 43.8
Gohir.A05G030600 Gossypium hirsutum HOM05D006920 ORTHO05D005895 1.0e-13 83.2 121 56.2
MELO3C010521.2 Cucumis melo HOM05D006920 ORTHO05D005895 1.3e-13 82.8 242 38.0
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 1.7e-13 82.4 113 61.9
A02p08870 Brassica napus HOM05D010535 ORTHO05D005895 2.3e-13 82.0 225 35.1
BraA02t05956Z Brassica rapa HOM05D010535 ORTHO05D005895 2.3e-13 82.0 225 35.1
Medtr5g096500 Medicago truncatula HOM05D006920 ORTHO05D005895 2.3e-13 82.0 205 41.5
VMungo0331G1985 Vigna mungo HOM05D006920 ORTHO05D005895 2.3e-13 82.0 210 46.7
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 2.9e-13 81.6 217 45.6
Zm00001eb160100 Zea mays HOM05D006920 ORTHO05D005895 2.9e-13 81.6 222 45.5
Aa31LG11G5970 Aethionema arabicum HOM05D010535 ORTHO05D005895 3.9e-13 81.3 77 55.8
EL10Ac8g19187 Beta vulgaris HOM05D036879 ORTHO05D005895 5.0e-13 80.9 89 66.3
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 5.0e-13 80.9 256 41.0
PGR142G4106 Punica granatum HOM05D006920 ORTHO05D005895 5.0e-13 80.9 119 52.1
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 8.6e-13 80.1 203 45.3
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 8.6e-13 80.1 207 45.9
CAN.G610.81 Capsicum annuum HOM05D006920 ORTHO05D005895 1.1e-12 79.7 212 50.5
Lj3g0019860 Lotus japonicus HOM05D006920 ORTHO05D005895 1.1e-12 79.7 236 40.7
Lj6g0023447 Lotus japonicus HOM05D006920 ORTHO05D005895 1.9e-12 79.0 231 42.9
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 2.5e-12 78.6 88 64.8
Glyma.14G213000 Glycine max HOM05D006920 ORTHO05D005895 4.3e-12 77.8 213 44.1
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 9.5e-12 76.6 81 72.8
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.6e-11 75.9 200 36.5
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 1.6e-11 75.9 234 41.5
Prupe.7G207100 Prunus persica HOM05D006920 ORTHO05D005895 1.6e-11 75.9 359 35.4
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 2.1e-11 75.5 86 53.5
Sc08g0008560 Simmondsia chinensis HOM05D006920 ORTHO05D005895 3.6e-11 74.7 230 28.7
Eucgr.C01704 Eucalyptus grandis HOM05D006920 ORTHO05D005895 4.7e-11 74.3 225 44.4
arahy.Tifrunner.gnm1.ann1.IGMF9F Arachis hypogaea HOM05D006920 ORTHO05D005895 8.0e-11 73.6 212 41.0
Gohir.A10G064850 Gossypium hirsutum HOM05D006920 ORTHO05D005895 8.0e-11 73.6 108 40.7
Migut.J00579 Erythranthe guttata HOM05D006920 ORTHO05D005895 1.0e-10 73.2 93 63.4
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 1.0e-10 73.2 198 44.4
HanXRQChr05g0128971 Helianthus annuus HOM05D006920 ORTHO05D005895 3.1e-10 71.6 112 55.4
unitig_699.g19418 Utricularia gibba HOM05D006920 ORTHO05D005895 3.1e-10 71.6 115 54.8
arahy.Tifrunner.gnm1.ann1.50MPSE Arachis hypogaea HOM05D006920 ORTHO05D005895 4.0e-10 71.2 255 34.5
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 4.0e-10 71.2 233 40.3
FvH4_1g07770 Fragaria vesca HOM05D006920 ORTHO05D005895 4.0e-10 71.2 378 30.4
SEGI_28908 Sequoiadendron giganteum HOM05D006920 ORTHO05D005895 5.2e-10 70.9 102 56.9
MD15G1209300 Malus domestica HOM05D006920 ORTHO05D005895 6.8e-10 70.5 330 30.0
HanXRQChr10g0310341 Helianthus annuus HOM05D001214 ORTHO05D001029 8.9e-10 70.1 112 45.5
Pp3c19_22680 Physcomitrium patens HOM05D006920 ORTHO05D005895 1.5e-09 69.3 105 56.2
HanXRQChr03g0060321 Helianthus annuus HOM05D006920 ORTHO05D005895 2.6e-09 68.6 160 50.6
Migut.J00581 Erythranthe guttata HOM05D006920 ORTHO05D005895 3.4e-09 68.2 226 43.4
FAN19G0513 Fragaria x ananassa HOM05D006920 ORTHO05D005895 4.4e-09 67.8 377 27.9
Oeu000320.3 Olea europaea HOM05D006920 ORTHO05D005895 4.4e-09 67.8 58 56.9
BcaB05g22299 Brassica carinata HOM05D010535 ORTHO05D005895 7.5e-09 67.0 372 23.7
Lalb_Chr25g0278561 Lupinus albus HOM05D006920 ORTHO05D005895 7.5e-09 67.0 205 45.4
ECA240G4801 Erigeron canadensis HOM05D006920 ORTHO05D005895 9.8e-09 66.6 63 58.7
Ah.12g064230 Amaranthus hybridus HOM05D006920 ORTHO05D005895 1.7e-08 65.9 58 58.6
Lsat_1_v5_gn_7_36681 Lactuca sativa HOM05D006920 ORTHO05D005895 4.9e-08 64.3 153 37.3
AagrBONN_evm.TU.Sc2ySwM_228.2245 Anthoceros agrestis HOM05D006920 ORTHO05D005895 8.3e-08 63.5 104 54.8
HanXRQChr14g0436791 Helianthus annuus HOM05D006920 ORTHO05D005895 8.3e-08 63.5 59 47.5
A10p14250 Brassica napus HOM05D010535 ORTHO05D005895 2.4e-07 62.0 49 61.2
BraA10t43516Z Brassica rapa HOM05D010535 ORTHO05D005895 2.4e-07 62.0 49 61.2
Mapoly0131s0021 Marchantia polymorpha HOM05D006920 ORTHO05D005895 5.4e-07 60.8 113 50.4


User provided reference genes

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