Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G2035 Papaver somniferum HOM05D004014 ORTHO05D005890 1.9e-185 652.5 369 100.0
PSO063G2767 Papaver somniferum HOM05D004014 ORTHO05D005890 3.2e-140 502.3 369 72.4
PSO832G1047 Papaver somniferum HOM05D004014 ORTHO05D005890 4.2e-140 501.9 369 72.1
Nn8g38926 Nelumbo nucifera HOM05D004014 ORTHO05D005890 3.7e-120 435.6 370 63.0
Dinv37931 Davidia involucrata HOM05D004014 ORTHO05D005890 2.0e-118 429.9 374 61.8
QL05p015866 Quercus lobata HOM05D004014 ORTHO05D005890 2.6e-118 429.5 370 61.1
GSVIVG01016888001 Vitis vinifera HOM05D004014 ORTHO05D005890 4.5e-118 428.7 368 61.4
COL.COLO4_30610 Corchorus olitorius HOM05D004014 ORTHO05D005890 2.2e-117 426.4 370 60.0
vmacro16995 Vaccinium macrocarpon HOM05D004014 ORTHO05D005890 1.4e-116 423.7 370 60.8
Gohir.D09G080501 Gossypium hirsutum HOM05D004014 ORTHO05D005890 4.2e-116 422.2 370 59.5
CANSAT56G3696 Cannabis sativa HOM05D004014 ORTHO05D005890 9.4e-116 421.0 368 60.3
CiPaw.02G141900 Carya illinoinensis HOM05D004014 ORTHO05D005890 9.4e-116 421.0 368 61.1
CSS0031715 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D005890 1.2e-115 420.6 371 59.6
Gorai.006G096100 Gossypium raimondii HOM05D004014 ORTHO05D005890 1.6e-115 420.2 369 59.3
TAR626G0060 Trochodendron aralioides HOM05D004014 ORTHO05D005890 1.6e-115 420.2 370 59.7
Duzib160G0604 Durio zibethinus HOM05D004014 ORTHO05D005890 2.1e-115 419.9 370 59.5
Thecc.06G108100 Theobroma cacao HOM05D004014 ORTHO05D005890 2.1e-115 419.9 367 60.2
Gohir.A09G080500 Gossypium hirsutum HOM05D004014 ORTHO05D005890 2.7e-115 419.5 370 59.2
Manes.04G137700 Manihot esculenta HOM05D004014 ORTHO05D005890 2.7e-115 419.5 370 60.0
HanXRQChr05g0140121 Helianthus annuus HOM05D004014 ORTHO05D005890 3.6e-115 419.1 370 59.2
DCAR_007610 Daucus carota HOM05D004014 ORTHO05D005890 4.7e-115 418.7 370 60.3
RcHm_v2.0_Chr2g0142531 Rosa chinensis HOM05D004014 ORTHO05D005890 6.1e-115 418.3 370 59.2
CSS0027279 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D005890 1.8e-114 416.8 367 59.9
DCAR_007611 Daucus carota HOM05D004014 ORTHO05D005890 2.3e-114 416.4 370 60.3
Actinidia39122 Actinidia chinensis HOM05D004014 ORTHO05D005890 3.0e-114 416.0 370 60.0
HanXRQChr09g0276341 Helianthus annuus HOM05D004014 ORTHO05D005890 3.9e-114 415.6 367 60.2
Haze_15924 Corylus avellana HOM05D004014 ORTHO05D005890 6.7e-114 414.8 386 58.5
Lsat_1_v5_gn_4_95921 Lactuca sativa HOM05D004014 ORTHO05D005890 2.0e-113 413.3 365 59.7
CiPaw.01G227100 Carya illinoinensis HOM05D004014 ORTHO05D005890 2.6e-113 412.9 372 58.9
Actinidia09020 Actinidia chinensis HOM05D004014 ORTHO05D005890 4.4e-113 412.1 370 59.7
FAN14G2620 Fragaria x ananassa HOM05D004014 ORTHO05D005890 5.7e-113 411.8 368 58.2
Solyc12g044740.2 Solanum lycopersicum HOM05D004014 ORTHO05D005890 5.7e-113 411.8 370 58.9
Sopen12g022890 Solanum pennellii HOM05D004014 ORTHO05D005890 5.7e-113 411.8 370 58.9
Aqoxy7G01294 Aquilegia oxysepala HOM05D004014 ORTHO05D005890 7.4e-113 411.4 365 59.7
ECA232G4630 Erigeron canadensis HOM05D004014 ORTHO05D005890 7.4e-113 411.4 370 59.5
FAN05G5071 Fragaria x ananassa HOM05D004014 ORTHO05D005890 9.7e-113 411.0 368 57.9
Potri.003G033700 Populus trichocarpa HOM05D004014 ORTHO05D005890 2.2e-112 409.8 366 58.5
Prupe.3G052400 Prunus persica HOM05D004014 ORTHO05D005890 2.2e-112 409.8 370 58.4
Sabra03G0029500 Salix brachista HOM05D004014 ORTHO05D005890 2.2e-112 409.8 366 59.3
FAN02G0480 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.7e-112 409.1 368 57.3
Atru.chr1.3637 Acer truncatum HOM05D004014 ORTHO05D005890 8.2e-112 407.9 372 58.9
Atru.chr8.1187 Acer truncatum HOM05D004014 ORTHO05D005890 8.2e-112 407.9 372 58.9
arahy.Tifrunner.gnm1.ann1.ZVXK34 Arachis hypogaea HOM05D004014 ORTHO05D005890 1.8e-111 406.8 370 58.9
PGR102G0116 Punica granatum HOM05D004014 ORTHO05D005890 3.1e-111 406.0 372 57.5
TWI79G1365 Tripterygium wilfordii HOM05D004014 ORTHO05D005890 3.1e-111 406.0 368 58.2
Hund00756 Selenicereus undatus HOM05D004014 ORTHO05D005890 7.0e-111 404.8 367 58.6
Rhsim12G0204700 Rhododendron simsii HOM05D004014 ORTHO05D005890 9.1e-111 404.4 408 55.1
AUR62041068 Chenopodium quinoa HOM05D004014 ORTHO05D005890 1.2e-110 404.1 367 57.2
arahy.Tifrunner.gnm1.ann1.SBEJ10 Arachis hypogaea HOM05D004014 ORTHO05D005890 1.5e-110 403.7 369 59.1
CAN.G12.3 Capsicum annuum HOM05D004014 ORTHO05D005890 1.5e-110 403.7 370 58.1
Medtr8g015660 Medicago truncatula HOM05D004014 ORTHO05D005890 1.5e-110 403.7 370 58.9
Ciclev10025482m.g Citrus clementina HOM05D004014 ORTHO05D005890 2.0e-110 403.3 371 57.7
Lsat_1_v5_gn_1_36421 Lactuca sativa HOM05D004014 ORTHO05D005890 2.0e-110 403.3 370 57.8
Glyma.07G012300 Glycine max HOM05D004014 ORTHO05D005890 2.6e-110 402.9 370 58.9
Sabra01G0156400 Salix brachista HOM05D004014 ORTHO05D005890 2.6e-110 402.9 376 57.7
FvH4_6g32980 Fragaria vesca HOM05D004014 ORTHO05D005890 4.5e-110 402.1 370 57.3
Potri.001G197400 Populus trichocarpa HOM05D004014 ORTHO05D005890 4.5e-110 402.1 369 58.3
TPR.G24219 Trifolium pratense HOM05D004014 ORTHO05D005890 4.5e-110 402.1 370 59.5
Phvul.010G141700 Phaseolus vulgaris HOM05D004014 ORTHO05D005890 5.9e-110 401.7 370 58.1
Cc04_g02170 Coffea canephora HOM05D004014 ORTHO05D005890 7.7e-110 401.4 369 58.3
FAN09G0688 Fragaria x ananassa HOM05D004014 ORTHO05D005890 1.0e-109 401.0 368 56.8
Manes.11G028700 Manihot esculenta HOM05D004014 ORTHO05D005890 1.0e-109 401.0 369 58.3
VMungo0331G1129 Vigna mungo HOM05D004014 ORTHO05D005890 1.3e-109 400.6 370 57.8
AUR62037625 Chenopodium quinoa HOM05D004014 ORTHO05D005890 2.2e-109 399.8 367 57.5
Glyma.08G195900 Glycine max HOM05D004014 ORTHO05D005890 2.9e-109 399.4 370 58.6
MD09G1195900 Malus domestica HOM05D004014 ORTHO05D005890 5.0e-109 398.7 371 57.4
MD17G1176500 Malus domestica HOM05D004014 ORTHO05D005890 5.0e-109 398.7 371 57.7
ClCG09G000550 Citrullus lanatus HOM05D004014 ORTHO05D005890 1.1e-108 397.5 370 57.6
Nitab4.5_0006642g0010 Nicotiana tabacum HOM05D004014 ORTHO05D005890 1.9e-108 396.7 370 57.0
Sc12g0009850 Simmondsia chinensis HOM05D004014 ORTHO05D005890 2.5e-108 396.4 370 57.0
Eucgr.F03104 Eucalyptus grandis HOM05D004014 ORTHO05D005890 3.2e-108 396.0 370 56.2
Peaxi162Scf00177g00215 Petunia axillaris HOM05D004014 ORTHO05D005890 4.2e-108 395.6 370 57.8
Lj3g0023335 Lotus japonicus HOM05D004014 ORTHO05D005890 5.5e-108 395.2 370 58.1
Nitab4.5_0003218g0070 Nicotiana tabacum HOM05D004014 ORTHO05D005890 5.5e-108 395.2 370 56.8
Lalb_Chr25g0280531 Lupinus albus HOM05D004014 ORTHO05D005890 7.2e-108 394.8 370 57.8
Ca_23300_v3 Cicer arietinum L. HOM05D004014 ORTHO05D005890 4.7e-107 392.1 370 57.8
THA.LOC104817933 Tarenaya hassleriana HOM05D004014 ORTHO05D005890 4.7e-107 392.1 369 56.1
CsaV3_7G034900 Cucumis sativus L. HOM05D004014 ORTHO05D005890 8.0e-107 391.3 370 56.8
Oeu002520.1 Olea europaea HOM05D004014 ORTHO05D005890 1.8e-106 390.2 370 56.5
Aa31LG8G7980 Aethionema arabicum HOM05D004014 ORTHO05D005890 8.8e-106 387.9 369 55.6
Oeu039979.1 Olea europaea HOM05D004014 ORTHO05D005890 1.5e-105 387.1 367 55.6
SalBow6G0444 Salvia bowleyana HOM05D004014 ORTHO05D005890 1.5e-105 387.1 366 56.3
Thhalv10011383m.g Eutrema salsugineum HOM05D004014 ORTHO05D005890 5.7e-105 385.2 366 56.0
Lj5A49T39 Lonicera japonica HOM05D004014 ORTHO05D005890 5.7e-105 385.2 355 59.7
THA.LOC104805917 Tarenaya hassleriana HOM05D004014 ORTHO05D005890 5.7e-105 385.2 370 55.7
EL10Ac2g03344 Beta vulgaris HOM05D004014 ORTHO05D005890 9.7e-105 384.4 403 53.1
Migut.I01003 Erythranthe guttata HOM05D004014 ORTHO05D005890 9.7e-105 384.4 367 55.9
Lalb_Chr04g0263081 Lupinus albus HOM05D004014 ORTHO05D005890 9.7e-105 384.4 371 56.3
Sed0015765 Sechium edule HOM05D004014 ORTHO05D005890 9.7e-105 384.4 368 56.0
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 9.7e-105 384.4 367 56.1
ATR0789G134 Amborella trichopoda HOM05D004014 ORTHO05D005890 1.7e-104 383.6 369 55.8
Carub.0001s4058 Capsella rubella HOM05D004014 ORTHO05D005890 1.7e-104 383.6 366 55.7
C03p90260 Brassica napus HOM05D004014 ORTHO05D005890 3.7e-104 382.5 366 56.0
BolC3t21348H Brassica oleracea HOM05D004014 ORTHO05D005890 3.7e-104 382.5 366 56.0
Dinv30396 Davidia involucrata HOM05D004014 ORTHO05D005890 3.7e-104 382.5 368 56.2
AL1G59650 Arabidopsis lyrata HOM05D004014 ORTHO05D005890 1.1e-103 380.9 366 55.2
A08p02550 Brassica napus HOM05D004014 ORTHO05D005890 1.1e-103 380.9 366 55.7
MSTRG.22603 Avicennia marina HOM05D004014 ORTHO05D005890 1.8e-103 380.2 367 55.6
AT1G51710 Arabidopsis thaliana HOM05D004014 ORTHO05D005890 2.4e-103 379.8 366 54.9
CARHR041870 Cardamine hirsuta HOM05D004014 ORTHO05D005890 3.1e-103 379.4 365 55.6
BcaC01g01290 Brassica carinata HOM05D004014 ORTHO05D005890 7.0e-103 378.3 366 55.5
BraA08t32295Z Brassica rapa HOM05D004014 ORTHO05D005890 9.1e-103 377.9 368 55.4
Thhalv10020636m.g Eutrema salsugineum HOM05D004014 ORTHO05D005890 1.3e-101 374.0 368 54.6
AT3G21280 Arabidopsis thaliana HOM05D004014 ORTHO05D005890 1.7e-101 373.6 368 54.6
HPP92_005519 Vanilla planifolia HOM05D004014 ORTHO05D005890 3.8e-101 372.5 369 55.0
AL3G35320 Arabidopsis lyrata HOM05D004014 ORTHO05D005890 3.2e-100 369.4 368 54.3
BolC6t35793H Brassica oleracea HOM05D004014 ORTHO05D005890 1.4e-98 364.0 366 54.6
CDE07G0617 Ceratophyllum demersum HOM05D004014 ORTHO05D005890 8.8e-98 361.3 372 53.8
unitig_37.g12991 Utricularia gibba HOM05D004014 ORTHO05D005890 8.8e-98 361.3 365 53.7
Zm00001eb162410 Zea mays HOM05D004014 ORTHO05D005890 2.0e-94 350.1 366 52.7
Os01g0550100 Oryza sativa ssp. japonica HOM05D004014 ORTHO05D005890 6.5e-93 345.1 369 51.8
Zm00001eb356540 Zea mays HOM05D004014 ORTHO05D005890 1.9e-92 343.6 378 51.1
BcaC08g43331 Brassica carinata HOM05D004014 ORTHO05D005890 2.5e-92 343.2 365 51.5
BraA06t23436Z Brassica rapa HOM05D004014 ORTHO05D005890 5.5e-92 342.0 365 51.2
Sed0015232 Sechium edule HOM05D004014 ORTHO05D005890 5.5e-92 342.0 353 54.4
BcaB07g33627 Brassica carinata HOM05D004014 ORTHO05D005890 1.6e-91 340.5 365 51.2
C06p06860 Brassica napus HOM05D004014 ORTHO05D005890 2.1e-91 340.1 354 53.7
Sp3g19320 Schrenkiella parvula HOM05D004014 ORTHO05D005890 2.7e-91 339.7 376 51.3
MELO3C024402.2 Cucumis melo HOM05D004014 ORTHO05D005890 1.7e-85 320.5 331 55.0
A06p02300 Brassica napus HOM05D004014 ORTHO05D005890 6.6e-85 318.5 353 50.4
Gohir.A10G062050 Gossypium hirsutum HOM05D004014 ORTHO05D005890 1.9e-84 317.0 391 47.6
SMO307G0086 Selaginella moellendorffii HOM05D004014 ORTHO05D005890 5.2e-82 308.9 367 47.4
SGA_v2.0_scaffold45G16993 Striga asiatica HOM05D004014 ORTHO05D005890 3.2e-79 299.7 386 47.7
Mapoly0134s0030 Marchantia polymorpha HOM05D004014 ORTHO05D005890 1.6e-78 297.4 372 47.8
QL05p015273 Quercus lobata HOM05D004014 ORTHO05D005890 3.9e-77 292.7 203 72.4
Psat4g193640 Pisum sativum HOM05D004014 ORTHO05D005890 2.1e-75 287.0 293 55.6
Pp3c7_7460 Physcomitrium patens HOM05D004014 ORTHO05D005890 6.1e-75 285.4 377 44.8
MBI04_g06225_MAGBIO Magnolia biondii HOM05D004014 ORTHO05D005890 6.8e-74 282.0 283 55.8
C01p50000 Brassica napus HOM05D004014 ORTHO05D005890 5.4e-71 272.3 368 45.1
BcaC09g48419 Brassica carinata HOM05D004014 ORTHO05D005890 7.0e-71 271.9 370 45.1
AagrBONN_evm.TU.Sc2ySwM_117.798 Anthoceros agrestis HOM05D004014 ORTHO05D005890 1.3e-69 267.7 378 43.1
BolC1t04957H Brassica oleracea HOM05D004014 ORTHO05D005890 4.3e-68 262.7 382 43.5
CBR_g3328 Chara braunii HOM05D004014 ORTHO05D005890 9.8e-65 251.5 394 37.6
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 7.1e-63 245.4 187 66.8
Cpa.g.sc131.37 Carica papaya HOM05D004014 ORTHO05D005890 3.6e-59 233.0 174 67.8
Rhsim12G0192600 Rhododendron simsii HOM05D004014 ORTHO05D005890 6.8e-50 202.2 214 50.0
Cre17.g726050 Chlamydomonas reinhardtii HOM05D004014 ORTHO05D005890 7.6e-49 198.7 366 34.7
Duzib192G0196 Durio zibethinus HOM05D004014 ORTHO05D005890 2.3e-45 187.2 272 44.9
Aqoxy3G00091 Aquilegia oxysepala HOM05D004014 ORTHO05D031250 1.6e-43 181.0 365 36.4
PRCOL_00000017 Prasinoderma coloniale HOM05D004014 ORTHO05D005890 1.6e-43 181.0 374 34.5
Ca_23623_v3 Cicer arietinum L. HOM05D004014 ORTHO05D005890 2.0e-41 174.1 241 41.5
Haze_26391 Corylus avellana HOM05D004014 ORTHO05D005890 4.9e-40 169.5 388 32.0
Sp1g38350 Schrenkiella parvula HOM05D004014 ORTHO05D005890 2.4e-39 167.2 366 35.0
Cpa.g.sc131.36 Carica papaya HOM05D004014 ORTHO05D005890 6.9e-34 149.1 129 58.1
Ca_11704_v3 Cicer arietinum L. HOM05D004014 ORTHO05D148986 6.0e-30 136.0 241 36.5
MCO05G115 Micromonas commoda HOM05D004014 ORTHO05D005890 1.0e-29 135.2 398 30.4
Carub.0003s2128 Capsella rubella HOM05D004014 ORTHO05D018183 1.8e-29 134.4 108 63.0
Carub.0003s2127 Capsella rubella HOM05D004014 ORTHO05D031250 8.1e-27 125.6 72 76.4
PSO013G0267 Papaver somniferum HOM05D004014 ORTHO05D303417 1.1e-23 115.2 128 49.2
AUR62007854 Chenopodium quinoa HOM05D011798 ORTHO05D014352 2.1e-19 100.9 123 43.1
Aqoxy3G00079 Aquilegia oxysepala HOM05D004014 ORTHO05D031250 1.8e-18 97.8 145 44.1
Lsat_1_v5_gn_1_44701 Lactuca sativa HOM05D004014 ORTHO05D005890 4.5e-17 93.2 62 72.6
SEGI_22647 Sequoiadendron giganteum HOM05D004014 ORTHO05D005890 2.2e-16 90.9 63 69.8
Ah.10g033570 Amaranthus hybridus HOM05D004014 ORTHO05D005890 9.3e-15 85.5 62 66.1
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea HOM05D004014 ORTHO05D031593 2.7e-14 84.0 90 55.6
AUR62015743 Chenopodium quinoa HOM05D004014 ORTHO05D031593 8.5e-08 62.4 41 68.3
Ca_14199_v3 Cicer arietinum L. HOM05D004014 ORTHO05D149221 3.6e-06 57.0 83 43.4
Pp3c11_21370 Physcomitrium patens HOM05D004014 ORTHO05D005890 4.6e-06 56.6 59 49.2


User provided reference genes

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