Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1845 Papaver somniferum HOM05D006220 ORTHO05D007590 2.8e-130 469.9 583 100.0
PSO210G4054 Papaver somniferum HOM05D006220 ORTHO05D007590 2.7e-125 453.4 583 95.2
Aqoxy4G01032 Aquilegia oxysepala HOM05D006220 ORTHO05D007590 7.9e-85 318.9 583 81.3
Cfa020552 Carpinus fangiana HOM05D006220 ORTHO05D007590 1.2e-77 295.0 584 69.0
Atru.chr2.2718 Acer truncatum HOM05D006220 ORTHO05D007590 1.6e-77 294.7 582 78.5
TWI38G2391 Tripterygium wilfordii HOM05D006220 ORTHO05D007590 3.6e-77 293.5 583 71.7
Hund22942 Selenicereus undatus HOM05D006220 ORTHO05D007590 1.0e-76 292.0 581 69.0
Lalb_Chr20g0109761 Lupinus albus HOM05D006220 ORTHO05D007590 1.4e-76 291.6 583 74.3
HanXRQChr03g0078511 Helianthus annuus HOM05D006220 ORTHO05D007590 3.9e-76 290.0 581 64.9
COL.COLO4_09426 Corchorus olitorius HOM05D006220 ORTHO05D007590 1.5e-75 288.1 582 72.2
CANSAT56G4311 Cannabis sativa HOM05D006220 ORTHO05D007590 2.0e-75 287.7 583 74.8
TAR626G0245 Trochodendron aralioides HOM05D006220 ORTHO05D007590 3.3e-75 287.0 564 78.2
arahy.Tifrunner.gnm1.ann1.BQ9KJC Arachis hypogaea HOM05D006220 ORTHO05D007590 5.7e-75 286.2 589 72.2
ATR0680G100 Amborella trichopoda HOM05D006220 ORTHO05D007590 7.4e-75 285.8 584 81.0
Hma1.2p1_0148F.1_g066160 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 9.7e-75 285.4 582 69.9
Glyma.13G278800 Glycine max HOM05D006220 ORTHO05D007590 1.3e-74 285.0 582 76.8
GSVIVG01014371001 Vitis vinifera HOM05D006220 ORTHO05D007590 1.3e-74 285.0 583 70.7
Thecc.07G079000 Theobroma cacao HOM05D006220 ORTHO05D007590 1.7e-74 284.6 583 69.8
RcHm_v2.0_Chr5g0034391 Rosa chinensis HOM05D006220 ORTHO05D007590 6.3e-74 282.7 584 69.9
arahy.Tifrunner.gnm1.ann1.LU5I8Y Arachis hypogaea HOM05D006220 ORTHO05D007590 1.8e-73 281.2 589 69.1
Zm00001eb259320 Zea mays HOM05D006220 ORTHO05D007590 7.0e-73 279.3 582 68.9
Lj3g0017554 Lotus japonicus HOM05D006220 ORTHO05D007590 9.1e-73 278.9 582 75.3
Prupe.4G184800 Prunus persica HOM05D006220 ORTHO05D007590 1.2e-72 278.5 583 63.8
Os02g0826600 Oryza sativa ssp. japonica HOM05D006220 ORTHO05D007590 1.6e-72 278.1 584 65.1
TPR.G38952 Trifolium pratense HOM05D006220 ORTHO05D007590 4.5e-72 276.6 596 70.8
CSS0010017 Camellia sinensis var. sinensis HOM05D006220 ORTHO05D007590 7.7e-72 275.8 583 68.3
Solyc10g006930.4 Solanum lycopersicum HOM05D006220 ORTHO05D007590 7.7e-72 275.8 583 72.4
CAN.G1110.52 Capsicum annuum HOM05D006220 ORTHO05D007590 1.3e-71 275.0 583 72.0
FvH4_3g20490 Fragaria vesca HOM05D006220 ORTHO05D007590 1.3e-71 275.0 585 78.5
FAN25G1684 Fragaria x ananassa HOM05D006220 ORTHO05D007590 1.3e-71 275.0 585 76.9
Sopen10g002840 Solanum pennellii HOM05D006220 ORTHO05D007590 3.8e-71 273.5 583 72.6
HPP92_022050 Vanilla planifolia HOM05D006220 ORTHO05D007590 3.8e-71 273.5 586 64.7
Actinidia05212 Actinidia chinensis HOM05D006220 ORTHO05D007590 6.5e-71 272.7 583 75.5
FAN16G3027 Fragaria x ananassa HOM05D006220 ORTHO05D007590 8.5e-71 272.3 585 78.5
Manes.03G112900 Manihot esculenta HOM05D006220 ORTHO05D007590 1.5e-70 271.6 583 70.0
CDE05G0932 Ceratophyllum demersum HOM05D006220 ORTHO05D007590 7.2e-70 269.2 585 73.0
Sp3g13670 Schrenkiella parvula HOM05D006220 ORTHO05D007590 9.4e-70 268.9 585 65.0
Potri.011G121700 Populus trichocarpa HOM05D006220 ORTHO05D007590 1.2e-69 268.5 583 78.9
FAN11G1997 Fragaria x ananassa HOM05D006220 ORTHO05D007590 6.1e-69 266.2 599 72.0
Gohir.A13G145200 Gossypium hirsutum HOM05D006220 ORTHO05D007590 8.0e-69 265.8 583 66.0
MD11G1243700 Malus domestica HOM05D006220 ORTHO05D007590 8.0e-69 265.8 586 62.8
Cc05_g12250 Coffea canephora HOM05D006220 ORTHO05D007590 3.0e-68 263.8 583 70.5
Psat5g245040 Pisum sativum HOM05D006220 ORTHO05D007590 8.8e-68 262.3 583 75.6
Glyma.12G222700 Glycine max HOM05D006220 ORTHO05D007590 2.0e-67 261.2 583 71.9
PGR031G1387 Punica granatum HOM05D006220 ORTHO05D007590 2.2e-66 257.7 582 66.8
Nn1g06599 Nelumbo nucifera HOM05D006220 ORTHO05D007590 4.1e-65 253.4 628 69.3
Ciclev10007835m.g Citrus clementina HOM05D006220 ORTHO05D007590 7.0e-65 252.7 582 72.2
Medtr2g079560 Medicago truncatula HOM05D006220 ORTHO05D007590 7.0e-65 252.7 570 75.6
AUR62029364 Chenopodium quinoa HOM05D006220 ORTHO05D007590 2.7e-64 250.8 583 50.6
Phvul.005G083000 Phaseolus vulgaris HOM05D006220 ORTHO05D007590 2.7e-64 250.8 587 76.5
Gohir.D13G150000 Gossypium hirsutum HOM05D006220 ORTHO05D007590 3.5e-64 250.4 583 66.2
AUR62034280 Chenopodium quinoa HOM05D006220 ORTHO05D007590 4.5e-64 250.0 574 58.0
Gorai.013G167800 Gossypium raimondii HOM05D006220 ORTHO05D007590 7.7e-64 249.2 583 65.9
VMungo1080G0525 Vigna mungo HOM05D006220 ORTHO05D007590 7.7e-64 249.2 562 77.9
THA.LOC104810484 Tarenaya hassleriana HOM05D006220 ORTHO05D007590 1.9e-62 244.6 582 67.2
ECA240G2314 Erigeron canadensis HOM05D006220 ORTHO05D007590 5.5e-62 243.0 582 61.5
AT3G15410 Arabidopsis thaliana HOM05D006220 ORTHO05D007590 3.0e-60 237.3 583 62.1
MELO3C016523.2 Cucumis melo HOM05D006220 ORTHO05D007590 8.8e-60 235.7 584 62.2
Rhsim06G0196800 Rhododendron simsii HOM05D006220 ORTHO05D007590 1.2e-59 235.3 601 70.5
DCAR_017149 Daucus carota HOM05D006220 ORTHO05D007590 1.5e-59 235.0 499 69.9
Carub.0003s1514 Capsella rubella HOM05D006220 ORTHO05D007590 2.0e-59 234.6 583 63.5
Dinv08311 Davidia involucrata HOM05D006220 ORTHO05D007590 5.7e-59 233.0 364 76.6
MBI17_g46353_MAGBIO Magnolia biondii HOM05D006220 ORTHO05D007590 7.5e-59 232.6 363 70.0
AL3G27960 Arabidopsis lyrata HOM05D006220 ORTHO05D007590 1.3e-58 231.9 583 62.4
Oeu008016.1 Olea europaea HOM05D006220 ORTHO05D007590 4.8e-58 229.9 363 63.6
CsaV3_3G006190 Cucumis sativus L. HOM05D006220 ORTHO05D007590 8.3e-58 229.2 584 61.6
Nitab4.5_0000207g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 8.3e-58 229.2 317 55.5
BcaB06g29573 Brassica carinata HOM05D006220 ORTHO05D007590 1.1e-57 228.8 590 62.2
Lsat_1_v5_gn_9_97140 Lactuca sativa HOM05D006220 ORTHO05D007590 1.1e-57 228.8 424 66.5
Eucgr.F03334 Eucalyptus grandis HOM05D006220 ORTHO05D007590 2.4e-57 227.6 580 66.0
EL10Ac4g08136 Beta vulgaris HOM05D006220 ORTHO05D007590 3.1e-57 227.3 562 70.3
Sed0021838 Sechium edule HOM05D006220 ORTHO05D007590 1.6e-56 224.9 581 64.0
BraA05t22221Z Brassica rapa HOM05D006220 ORTHO05D007590 2.7e-56 224.2 590 61.5
Duzib213G0302 Durio zibethinus HOM05D006220 ORTHO05D007590 3.5e-56 223.8 499 67.5
Thhalv10020366m.g Eutrema salsugineum HOM05D006220 ORTHO05D007590 4.5e-56 223.4 585 61.5
Migut.H01927 Erythranthe guttata HOM05D006220 ORTHO05D007590 3.2e-54 217.2 583 67.9
CARHR090460 Cardamine hirsuta HOM05D006220 ORTHO05D007590 1.2e-53 215.3 583 61.7
MD00G1090000 Malus domestica HOM05D006220 ORTHO05D007590 2.6e-51 207.6 555 60.5
CiPaw.11G172800 Carya illinoinensis HOM05D006220 ORTHO05D007590 5.7e-51 206.5 424 73.6
BolC5t33860H Brassica oleracea HOM05D006220 ORTHO05D007590 9.8e-51 205.7 612 58.7
Cpa.g.sc80.40 Carica papaya HOM05D006220 ORTHO05D007590 1.4e-49 201.8 591 58.7
Sc16g0006920 Simmondsia chinensis HOM05D006220 ORTHO05D007590 7.0e-49 199.5 500 64.2
vmacro11856 Vaccinium macrocarpon HOM05D006220 ORTHO05D007590 7.0e-49 199.5 575 65.7
SGA_v2.0_scaffold9G04934 Striga asiatica HOM05D006220 ORTHO05D007590 1.2e-48 198.7 598 59.0
MSTRG.14365 Avicennia marina HOM05D006220 ORTHO05D007590 2.7e-48 197.6 583 62.4
Sabra11G0107700 Salix brachista HOM05D006220 ORTHO05D007590 2.7e-48 197.6 683 60.2
A05p33990 Brassica napus HOM05D006220 ORTHO05D007590 9.5e-46 189.1 585 58.5
BcaC05g29008 Brassica carinata HOM05D006220 ORTHO05D007590 2.2e-42 177.9 584 58.6
Aa31LG8G2650 Aethionema arabicum HOM05D006220 ORTHO05D007590 2.9e-42 177.6 642 52.8
Nitab4.5_0001320g0170 Nicotiana tabacum HOM05D006220 ORTHO05D007590 1.1e-41 175.6 313 53.0
Hma1.2p1_0148F.1_g066170 Hydrangea macrophylla HOM05D006220 ORTHO05D007590 1.4e-41 175.3 281 58.0
Peaxi162Scf00027g02813 Petunia axillaris HOM05D006220 ORTHO05D007590 1.8e-41 174.9 561 66.8
ClCG10G006830 Citrullus lanatus HOM05D006220 ORTHO05D007590 4.1e-41 173.7 424 69.3
Pp3c6_15930 Physcomitrium patens HOM05D006220 ORTHO05D007590 3.9e-39 167.2 594 57.7
Mapoly0029s0091 Marchantia polymorpha HOM05D006220 ORTHO05D007590 3.3e-38 164.1 588 60.2
unitig_26.g9535 Utricularia gibba HOM05D006220 ORTHO05D007590 1.0e-36 159.1 557 33.6
Haze_09468 Corylus avellana HOM05D006220 ORTHO05D007590 3.2e-33 147.5 223 54.7
SMO200G0168 Selaginella moellendorffii HOM05D006220 ORTHO05D007590 2.0e-32 144.8 585 63.1
AagrBONN_evm.TU.Sc2ySwM_362.1464 Anthoceros agrestis HOM05D006220 ORTHO05D007590 4.6e-32 143.7 595 50.9
SalBow7G3592 Salvia bowleyana HOM05D006220 ORTHO05D007590 5.0e-31 140.2 558 50.2
arahy.Tifrunner.gnm1.ann1.XCJ8AH Arachis hypogaea HOM05D006220 ORTHO05D007590 6.2e-29 133.3 141 54.6
Lj1A847G19 Lonicera japonica HOM05D006220 ORTHO05D007590 1.1e-28 132.5 544 63.2
C05p51740 Brassica napus HOM05D006220 ORTHO05D007590 2.6e-27 127.9 351 71.8
Sabra11G0105900 Salix brachista HOM05D006220 ORTHO05D007590 1.4e-20 105.5 76 64.5
Sabra11G0106700 Salix brachista HOM05D006220 ORTHO05D007590 1.8e-20 105.1 75 65.3
Sabra11G0107000 Salix brachista HOM05D006220 ORTHO05D007590 1.8e-20 105.1 75 65.3
HPP92_027622 Vanilla planifolia HOM05D006220 ORTHO05D007590 4.0e-20 104.0 75 65.3
Sabra11G0105600 Salix brachista HOM05D006220 ORTHO05D007590 1.2e-19 102.4 75 64.0
MD11G1243500 Malus domestica HOM05D006220 ORTHO05D007590 3.4e-19 100.9 198 55.1
CBR_g29878 Chara braunii HOM05D006220 ORTHO05D007590 7.6e-19 99.8 160 38.1
Nitab4.5_0001320g0180 Nicotiana tabacum HOM05D006220 ORTHO05D007590 9.9e-19 99.4 99 52.5
FAN11G3846 Fragaria x ananassa HOM05D000189 ORTHO05D007610 3.5e-16 90.9 88 53.4
HanXRQChr09g0260971 Helianthus annuus HOM05D006220 ORTHO05D007590 4.3e-14 84.0 53 66.0
Haze_09464 Corylus avellana HOM05D006220 ORTHO05D007590 1.2e-11 75.9 53 64.2
vmacro07967 Vaccinium macrocarpon HOM05D004270 ORTHO05D007590 9.9e-11 72.8 104 43.3
Gohir.1Z049312 Gossypium hirsutum HOM05D006220 ORTHO05D007590 1.7e-10 72.0 56 69.6
Atru.chr2.2722 Acer truncatum HOM05D006220 ORTHO05D017154 2.9e-10 71.2 41 82.9
CBR_g29877 Chara braunii HOM05D005358 ORTHO05D006384 6.4e-10 70.1 76 40.8
Thecc.07G078400 Theobroma cacao HOM05D006220 ORTHO05D007590 6.4e-10 70.1 100 67.0
Cc05_g12270 Coffea canephora HOM05D006220 ORTHO05D007590 8.4e-10 69.7 104 74.0
Cc05_g12290 Coffea canephora HOM05D006220 ORTHO05D007590 8.4e-10 69.7 104 74.0
Cc05_g12300 Coffea canephora HOM05D006220 ORTHO05D007590 8.4e-10 69.7 104 74.0
Sc13g0008670 Simmondsia chinensis HOM05D006220 ORTHO05D007590 1.2e-08 65.9 98 67.3
Lsat_1_v5_gn_9_85500 Lactuca sativa HOM05D006220 ORTHO05D007590 7.8e-08 63.2 48 60.4
MCO03G083 Micromonas commoda HOM05D006220 ORTHO05D007590 7.8e-08 63.2 295 29.5
Cre01.g054100 Chlamydomonas reinhardtii HOM05D006220 ORTHO05D007590 7.3e-06 56.6 40 67.5


User provided reference genes

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