Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G1370 Papaver somniferum HOM05D006204 ORTHO05D007851 3.0e-282 974.5 498 100.0
PSO210G2735 Papaver somniferum HOM05D006204 ORTHO05D007851 9.6e-265 916.4 491 95.5
CSS0007769 Camellia sinensis var. sinensis HOM05D006204 ORTHO05D007851 1.0e-157 560.8 426 66.4
Dinv10448 Davidia involucrata HOM05D006204 ORTHO05D007851 1.7e-157 560.1 497 60.4
Cfa010629 Carpinus fangiana HOM05D006204 ORTHO05D007851 3.0e-157 559.3 494 61.9
Aqoxy2G00207 Aquilegia oxysepala HOM05D006204 ORTHO05D007851 3.9e-157 558.9 492 58.9
Prupe.8G189100 Prunus persica HOM05D006204 ORTHO05D007851 3.9e-157 558.9 505 59.6
Rhsim13G0053400 Rhododendron simsii HOM05D006204 ORTHO05D007851 3.9e-157 558.9 502 59.4
Cfa010628 Carpinus fangiana HOM05D006204 ORTHO05D007851 1.5e-156 557.0 488 61.5
CiPaw.13G058500 Carya illinoinensis HOM05D006204 ORTHO05D007851 4.3e-156 555.4 418 66.7
TWI36G0048 Tripterygium wilfordii HOM05D006204 ORTHO05D007851 5.6e-156 555.1 449 63.0
MD05G1157000 Malus domestica HOM05D006204 ORTHO05D007851 6.2e-155 551.6 504 58.3
RcHm_v2.0_Chr6g0282641 Rosa chinensis HOM05D006204 ORTHO05D007851 2.4e-154 549.7 504 57.1
Lj2C1115T10 Lonicera japonica HOM05D006204 ORTHO05D007851 5.3e-154 548.5 500 58.2
Manes.12G059400 Manihot esculenta HOM05D006204 ORTHO05D007851 5.3e-154 548.5 435 63.2
Cpa.g.sc8.59 Carica papaya HOM05D006204 ORTHO05D007851 1.2e-153 547.4 424 66.0
A06p39170 Brassica napus HOM05D006204 ORTHO05D007851 4.9e-152 542.0 428 65.0
ECA236G0779 Erigeron canadensis HOM05D006204 ORTHO05D007851 8.4e-152 541.2 415 65.5
FvH4_2g17671 Fragaria vesca HOM05D006204 ORTHO05D007851 8.4e-152 541.2 501 56.9
Potri.014G018300 Populus trichocarpa HOM05D006204 ORTHO05D007851 1.1e-151 540.8 419 63.5
Cc01_g16040 Coffea canephora HOM05D006204 ORTHO05D007851 1.9e-151 540.0 500 57.4
PGR083G1941 Punica granatum HOM05D006204 ORTHO05D007851 5.4e-151 538.5 433 64.4
QL09p047023 Quercus lobata HOM05D006204 ORTHO05D007851 5.4e-151 538.5 476 60.3
Sabra14G0135500 Salix brachista HOM05D006204 ORTHO05D007851 1.2e-150 537.3 427 63.0
C07p39160 Brassica napus HOM05D006204 ORTHO05D007851 2.1e-150 536.6 428 64.0
Duzib211G0163 Durio zibethinus HOM05D006204 ORTHO05D007851 2.1e-150 536.6 419 65.9
Peaxi162Scf00672g00017 Petunia axillaris HOM05D006204 ORTHO05D007851 2.7e-150 536.2 426 63.8
BraA06t26832Z Brassica rapa HOM05D006204 ORTHO05D007851 3.5e-150 535.8 428 64.0
Lsat_1_v5_gn_8_97700 Lactuca sativa HOM05D006204 ORTHO05D007851 4.6e-150 535.4 422 64.5
Prupe.8G189200 Prunus persica HOM05D006204 ORTHO05D007851 4.6e-150 535.4 429 62.2
SGA_v2.0_scaffold566G52950 Striga asiatica HOM05D006204 ORTHO05D007851 4.6e-150 535.4 432 63.2
FAN27G0099 Fragaria x ananassa HOM05D006204 ORTHO05D007851 1.3e-149 533.9 501 56.1
BcaC06g30795 Brassica carinata HOM05D006204 ORTHO05D007851 1.7e-149 533.5 428 64.0
SalBow6G6469 Salvia bowleyana HOM05D006204 ORTHO05D007851 2.3e-149 533.1 459 61.2
MSTRG.18500 Avicennia marina HOM05D006204 ORTHO05D007851 3.0e-149 532.7 486 57.6
Potri.014G177300 Populus trichocarpa HOM05D006204 ORTHO05D007851 3.9e-149 532.3 419 62.8
Sp2g18790 Schrenkiella parvula HOM05D006204 ORTHO05D007851 3.9e-149 532.3 420 64.3
Ciclev10015007m.g Citrus clementina HOM05D006204 ORTHO05D007851 6.6e-149 531.6 442 62.0
Gorai.007G160200 Gossypium raimondii HOM05D006204 ORTHO05D007851 6.6e-149 531.6 499 58.9
Oeu051516.1 Olea europaea HOM05D006204 ORTHO05D007851 6.6e-149 531.6 424 62.7
Migut.D00744 Erythranthe guttata HOM05D006204 ORTHO05D007851 8.7e-149 531.2 465 60.4
Gohir.D11G149400 Gossypium hirsutum HOM05D006204 ORTHO05D007851 1.9e-148 530.0 499 58.9
Solyc09g055910.3 Solanum lycopersicum HOM05D006204 ORTHO05D007851 1.9e-148 530.0 430 62.3
Hma1.2p1_0161F.1_g071490 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 4.3e-148 528.9 399 67.2
ATR0743G111 Amborella trichopoda HOM05D006204 ORTHO05D007851 9.6e-148 527.7 433 62.4
Sopen09g021740 Solanum pennellii HOM05D006204 ORTHO05D007851 9.6e-148 527.7 430 62.3
Thecc.01G209900 Theobroma cacao HOM05D006204 ORTHO05D007851 9.6e-148 527.7 419 64.4
BolC7t44436H Brassica oleracea HOM05D006204 ORTHO05D007851 1.6e-147 526.9 442 62.0
Lj1g0017122 Lotus japonicus HOM05D006204 ORTHO05D007851 2.1e-147 526.6 421 62.0
Carub.0008s0801 Capsella rubella HOM05D006204 ORTHO05D007851 8.1e-147 524.6 420 64.8
AL8G21270 Arabidopsis lyrata HOM05D006204 ORTHO05D007851 2.4e-146 523.1 421 64.4
Gohir.A11G143100 Gossypium hirsutum HOM05D006204 ORTHO05D007851 2.4e-146 523.1 499 58.3
Eucgr.H00714 Eucalyptus grandis HOM05D006204 ORTHO05D007851 5.3e-146 521.9 421 62.0
Medtr7g051240 Medicago truncatula HOM05D006204 ORTHO05D007851 5.3e-146 521.9 419 61.6
Thhalv10004189m.g Eutrema salsugineum HOM05D006204 ORTHO05D007851 1.2e-145 520.8 418 64.6
Nitab4.5_0002518g0020 Nicotiana tabacum HOM05D006204 ORTHO05D007851 1.2e-145 520.8 503 54.7
AT5G48440 Arabidopsis thaliana HOM05D006204 ORTHO05D007851 2.0e-145 520.0 420 64.5
Haze_03572 Corylus avellana HOM05D006204 ORTHO05D007851 3.4e-145 519.2 568 52.8
CAN.G120.6 Capsicum annuum HOM05D006204 ORTHO05D007851 5.8e-145 518.5 427 61.8
FAN15G1742 Fragaria x ananassa HOM05D006204 ORTHO05D007851 3.8e-144 515.8 513 54.0
ClCG09G007900 Citrullus lanatus HOM05D006204 ORTHO05D007851 8.4e-144 514.6 439 60.4
CsaV3_7G027170 Cucumis sativus L. HOM05D006204 ORTHO05D007851 3.2e-143 512.7 434 60.8
Phvul.008G135200 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 4.2e-143 512.3 422 60.4
TPR.G26855 Trifolium pratense HOM05D006204 ORTHO05D007851 9.3e-143 511.1 469 56.7
Lalb_Chr19g0126211 Lupinus albus HOM05D006204 ORTHO05D007851 1.2e-142 510.8 418 61.0
HanXRQChr09g0257591 Helianthus annuus HOM05D006204 ORTHO05D007851 1.6e-142 510.4 466 59.0
Glyma.08G343200 Glycine max HOM05D006204 ORTHO05D007851 2.7e-142 509.6 419 60.4
Aa31sc661G10 Aethionema arabicum HOM05D006204 ORTHO05D007851 6.0e-142 508.4 424 63.4
Ca_07443_v3 Cicer arietinum L. HOM05D006204 ORTHO05D007851 7.9e-142 508.1 417 60.4
MBI11_g40788_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 7.9e-142 508.1 373 66.0
AUR62008077 Chenopodium quinoa HOM05D006204 ORTHO05D007851 3.0e-141 506.1 417 60.2
Nn1g09591 Nelumbo nucifera HOM05D006204 ORTHO05D007851 1.1e-140 504.2 369 66.7
Sed0024966 Sechium edule HOM05D006204 ORTHO05D007851 1.9e-140 503.4 420 61.7
Phvul.008G135100 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 2.4e-138 496.5 492 54.1
THA.LOC104802642 Tarenaya hassleriana HOM05D006204 ORTHO05D007851 5.3e-138 495.4 399 64.9
Nitab4.5_0000038g0330 Nicotiana tabacum HOM05D006204 ORTHO05D007851 9.0e-138 494.6 407 60.4
Hund09476 Selenicereus undatus HOM05D006204 ORTHO05D007851 9.0e-138 494.6 415 60.2
Ah.02g111080 Amaranthus hybridus HOM05D006204 ORTHO05D007851 1.2e-137 494.2 423 57.7
Psat3g151720 Pisum sativum HOM05D006204 ORTHO05D007851 6.5e-136 488.4 385 62.9
HanXRQChr09g0257621 Helianthus annuus HOM05D006204 ORTHO05D007851 1.4e-135 487.3 463 57.2
CARHR183670 Cardamine hirsuta HOM05D006204 ORTHO05D007851 5.5e-135 485.3 422 59.7
COL.COLO4_06929 Corchorus olitorius HOM05D006204 ORTHO05D007851 6.0e-134 481.9 443 58.5
GSVIVG01003799001 Vitis vinifera HOM05D006204 ORTHO05D007851 3.9e-133 479.2 442 57.5
EL10Ac5g10598 Beta vulgaris HOM05D006204 ORTHO05D007851 2.5e-132 476.5 484 52.1
Zm00001eb318320 Zea mays HOM05D006204 ORTHO05D007851 4.3e-132 475.7 420 56.2
VMungo1383G3498 Vigna mungo HOM05D006204 ORTHO05D007851 1.2e-129 467.6 403 59.1
arahy.Tifrunner.gnm1.ann1.LI75FD Arachis hypogaea HOM05D006204 ORTHO05D007851 8.4e-128 461.5 455 53.6
vmacro02824 Vaccinium macrocarpon HOM05D006204 ORTHO05D007851 3.2e-127 459.5 423 59.8
Hund09342 Selenicereus undatus HOM05D006204 ORTHO05D007851 2.7e-126 456.4 418 56.5
Sc17g0001620 Simmondsia chinensis HOM05D006204 ORTHO05D007851 1.8e-125 453.8 364 59.9
unitig_736.g22899 Utricularia gibba HOM05D006204 ORTHO05D007851 1.5e-124 450.7 423 55.6
DCAR_000507 Daucus carota HOM05D006204 ORTHO05D007851 5.7e-124 448.7 503 50.5
VMungo1383G1750 Vigna mungo HOM05D006204 ORTHO05D007851 8.8e-117 424.9 361 56.5
TAR362G0101 Trochodendron aralioides HOM05D006204 ORTHO05D007851 1.3e-115 421.0 391 60.6
AUR62028656 Chenopodium quinoa HOM05D006204 ORTHO05D007851 9.7e-108 394.8 415 51.3
AUR62027071 Chenopodium quinoa HOM05D006204 ORTHO05D007851 7.0e-106 388.7 413 49.4
AUR62030912 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.0e-105 387.1 422 49.1
Pp3c13_24490 Physcomitrium patens HOM05D006204 ORTHO05D007851 1.2e-102 377.9 446 44.8
AagrBONN_evm.TU.Sc2ySwM_344.1300 Anthoceros agrestis HOM05D006204 ORTHO05D007851 1.4e-101 374.4 423 46.1
Actinidia30007 Actinidia chinensis HOM05D006204 ORTHO05D007851 3.8e-96 356.3 276 65.6
Mapoly0020s0122 Marchantia polymorpha HOM05D006204 ORTHO05D007851 2.4e-90 337.0 422 44.1
Ah.01g024240 Amaranthus hybridus HOM05D006204 ORTHO05D007851 7.7e-89 332.0 371 47.7
AUR62043643 Chenopodium quinoa HOM05D006204 ORTHO05D007851 2.5e-87 327.0 293 53.2
SMO364G0271 Selaginella moellendorffii HOM05D006204 ORTHO05D007851 4.2e-87 326.2 402 42.0
Hma1.2p1_0161F.1_g071500 Hydrangea macrophylla HOM05D006204 ORTHO05D007851 3.4e-84 316.6 222 66.7
Atru.chr6.3536 Acer truncatum HOM05D006204 ORTHO05D007851 3.0e-72 276.9 256 56.2
Haze_03570 Corylus avellana HOM05D006204 ORTHO05D007851 1.5e-63 248.1 290 51.7
MELO3C015716.2 Cucumis melo HOM05D006204 ORTHO05D007851 8.9e-61 238.8 296 49.3
SEGI_17774 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 3.2e-58 230.3 221 53.4
Cre07.g346800 Chlamydomonas reinhardtii HOM05D006204 ORTHO05D007851 5.8e-52 209.5 455 32.5
QL09p047008 Quercus lobata HOM05D006204 ORTHO05D007851 2.7e-49 200.7 450 33.8
Actinidia27653 Actinidia chinensis HOM05D006204 ORTHO05D007851 1.5e-36 158.3 169 56.2
Cc10_g08090 Coffea canephora HOM05D006204 ORTHO05D007851 7.4e-31 139.4 184 47.3
MELO3C029187.2 Cucumis melo HOM05D006204 ORTHO05D007851 7.4e-31 139.4 103 64.1
HPP92_002747 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.4e-29 135.2 123 56.9
Psat0s4407g0040 Pisum sativum HOM05D006204 ORTHO05D007851 2.6e-28 131.0 103 61.2
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 4.2e-26 123.6 414 26.3
SEGI_39676 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 9.3e-26 122.5 108 55.6
Phvul.L001686 Phaseolus vulgaris HOM05D006204 ORTHO05D007851 5.3e-21 106.7 80 66.2
Atru.chr6.3537 Acer truncatum HOM05D006204 ORTHO05D007851 4.5e-20 103.6 129 48.8
SEGI_16048 Sequoiadendron giganteum HOM05D006204 ORTHO05D007851 8.4e-19 99.4 92 50.0
HPP92_002746 Vanilla planifolia HOM05D006204 ORTHO05D007851 1.2e-12 79.0 69 53.6
Psat7g213000 Pisum sativum HOM05D006204 ORTHO05D007851 2.0e-12 78.2 69 50.7
HPP92_002705 Vanilla planifolia HOM05D006204 ORTHO05D007851 6.5e-11 73.2 50 68.0
MBI11_g40786_MAGBIO Magnolia biondii HOM05D006204 ORTHO05D007851 1.2e-09 68.9 68 64.7


User provided reference genes

Program Settings