Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0932 Papaver somniferum HOM05D004257 ORTHO05D005202 2.0e-192 675.6 348 100.0
PSO210G0560 Papaver somniferum HOM05D004257 ORTHO05D005202 1.4e-190 669.5 348 99.1
PSO675G6112 Papaver somniferum HOM05D004257 ORTHO05D005202 1.4e-185 652.9 348 95.7
PSO675G8755 Papaver somniferum HOM05D004257 ORTHO05D005202 3.1e-185 651.7 348 95.4
PSO675G8702 Papaver somniferum HOM05D004257 ORTHO05D005202 4.4e-184 647.9 348 95.1
CSS0006901 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-159 566.2 348 82.5
CSS0016221 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.7e-159 566.2 348 82.5
Dinv06012 Davidia involucrata HOM05D004257 ORTHO05D005202 3.8e-159 565.1 348 82.5
Aqoxy2G03662 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 5.0e-159 564.7 332 84.3
TAR365G0817 Trochodendron aralioides HOM05D004257 ORTHO05D005202 4.2e-158 561.6 348 82.5
Nn3g19680 Nelumbo nucifera HOM05D004257 ORTHO05D005202 7.2e-158 560.8 348 80.7
Hma1.2p1_0075F.1_g039210 Hydrangea macrophylla HOM05D004257 ORTHO05D005202 1.6e-157 559.7 348 81.6
Aqoxy5G00217 Aquilegia oxysepala HOM05D004257 ORTHO05D005202 2.3e-156 555.8 323 85.8
FAN20G1479 Fragaria x ananassa HOM05D004257 ORTHO05D005202 7.4e-155 550.8 348 79.9
FAN27G2888 Fragaria x ananassa HOM05D004257 ORTHO05D005202 7.4e-155 550.8 348 80.2
TAR362G0002 Trochodendron aralioides HOM05D004257 ORTHO05D005202 9.7e-155 550.4 348 80.7
Manes.12G033300 Manihot esculenta HOM05D004257 ORTHO05D005202 1.3e-154 550.1 331 82.5
Lj5A229T68 Lonicera japonica HOM05D004257 ORTHO05D005202 2.8e-154 548.9 348 81.0
Nitab4.5_0004454g0010 Nicotiana tabacum HOM05D004257 ORTHO05D005202 6.3e-154 547.7 348 79.9
COL.COLO4_04031 Corchorus olitorius HOM05D004257 ORTHO05D005202 8.2e-154 547.4 348 79.0
CsaV3_3G022160 Cucumis sativus L. HOM05D004257 ORTHO05D005202 1.4e-153 546.6 349 78.2
Sabra02G0030200 Salix brachista HOM05D004257 ORTHO05D005202 1.8e-153 546.2 348 79.9
Sopen03g028840 Solanum pennellii HOM05D004257 ORTHO05D005202 1.8e-153 546.2 348 79.6
Solyc03g098140.3 Solanum lycopersicum HOM05D004257 ORTHO05D005202 2.4e-153 545.8 348 79.3
DCAR_010071 Daucus carota HOM05D004257 ORTHO05D005202 4.1e-153 545.0 348 79.9
FvH4_2g21300 Fragaria vesca HOM05D004257 ORTHO05D005202 4.1e-153 545.0 348 80.2
TWI18G0956 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 4.1e-153 545.0 348 77.9
FAN24G1061 Fragaria x ananassa HOM05D004257 ORTHO05D005202 6.9e-153 544.3 348 80.2
Potri.002G037400 Populus trichocarpa HOM05D004257 ORTHO05D005202 6.9e-153 544.3 348 79.6
Actinidia38939 Actinidia chinensis HOM05D004257 ORTHO05D005202 2.6e-152 542.3 348 79.0
Potri.005G225700 Populus trichocarpa HOM05D004257 ORTHO05D005202 5.9e-152 541.2 348 79.3
MBI07_g16916_MAGBIO Magnolia biondii HOM05D004257 ORTHO05D005202 7.7e-152 540.8 319 84.6
FAN15G2746 Fragaria x ananassa HOM05D004257 ORTHO05D005202 1.0e-151 540.4 348 78.7
RcHm_v2.0_Chr6g0287891 Rosa chinensis HOM05D004257 ORTHO05D005202 1.0e-151 540.4 353 77.3
CAN.G637.23 Capsicum annuum HOM05D004257 ORTHO05D005202 1.3e-151 540.0 348 78.7
CANSAT01G0143 Cannabis sativa HOM05D004257 ORTHO05D005202 1.7e-151 539.7 348 77.0
ClCG07G001120 Citrullus lanatus HOM05D004257 ORTHO05D005202 1.7e-151 539.7 356 76.7
Peaxi162Scf00171g00722 Petunia axillaris HOM05D004257 ORTHO05D005202 1.7e-151 539.7 348 79.0
Thecc.01G256600 Theobroma cacao HOM05D004257 ORTHO05D005202 2.2e-151 539.3 348 77.9
Ah.04g163130 Amaranthus hybridus HOM05D004257 ORTHO05D005202 2.9e-151 538.9 348 78.2
PGSC0003DMG402031052 Solanum tuberosum HOM05D004257 ORTHO05D005202 2.9e-151 538.9 348 78.2
Cfa002439 Carpinus fangiana HOM05D004257 ORTHO05D005202 3.8e-151 538.5 348 77.9
QL09p039362 Quercus lobata HOM05D004257 ORTHO05D005202 3.8e-151 538.5 347 77.2
Duzib133G1463 Durio zibethinus HOM05D004257 ORTHO05D005202 8.5e-151 537.3 348 77.9
Ciclev10021043m.g Citrus clementina HOM05D004257 ORTHO05D005202 1.1e-150 537.0 323 81.7
Duzib138G0002 Durio zibethinus HOM05D004257 ORTHO05D005202 1.1e-150 537.0 348 78.4
Cc04_g09710 Coffea canephora HOM05D004257 ORTHO05D005202 1.9e-150 536.2 353 76.5
MELO3C012874.2 Cucumis melo HOM05D004257 ORTHO05D005202 1.9e-150 536.2 353 77.3
AUR62040921 Chenopodium quinoa HOM05D004257 ORTHO05D005202 2.5e-150 535.8 346 77.7
Migut.O00233 Erythranthe guttata HOM05D004257 ORTHO05D005202 3.2e-150 535.4 349 78.8
vmacro10363 Vaccinium macrocarpon HOM05D004257 ORTHO05D005202 4.2e-150 535.0 355 78.6
AUR62004833 Chenopodium quinoa HOM05D004257 ORTHO05D005202 9.4e-150 533.9 346 77.7
Sed0014699 Sechium edule HOM05D004257 ORTHO05D005202 2.1e-149 532.7 353 76.8
Gorai.001G178500 Gossypium raimondii HOM05D004257 ORTHO05D005202 7.9e-149 530.8 348 77.9
SGA_v2.0_scaffold90G27780 Striga asiatica HOM05D004257 ORTHO05D005202 1.4e-148 530.0 348 77.6
Sed0007154 Sechium edule HOM05D004257 ORTHO05D005202 1.8e-148 529.6 348 76.4
DCAR_014267 Daucus carota HOM05D004257 ORTHO05D005202 2.3e-148 529.3 348 78.2
Gohir.D07G155600 Gossypium hirsutum HOM05D004257 ORTHO05D005202 2.3e-148 529.3 348 77.6
Gohir.A07G149400 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.1e-148 528.1 348 77.3
TWI12G0832 Tripterygium wilfordii HOM05D004257 ORTHO05D005202 5.1e-148 528.1 348 76.1
Atru.chr5.1712 Acer truncatum HOM05D004257 ORTHO05D005202 6.7e-148 527.7 348 75.9
CANSAT35G1745 Cannabis sativa HOM05D004257 ORTHO05D005202 6.7e-148 527.7 351 75.5
Hund06906 Selenicereus undatus HOM05D004257 ORTHO05D005202 8.8e-148 527.3 348 77.3
MSTRG.23192 Avicennia marina HOM05D004257 ORTHO05D005202 1.1e-147 526.9 353 77.1
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 1.5e-147 526.6 334 80.5
THA.LOC104825258 Tarenaya hassleriana HOM05D004257 ORTHO05D005202 5.7e-147 524.6 348 76.4
Sc09g0004250 Simmondsia chinensis HOM05D004257 ORTHO05D005202 7.4e-147 524.2 348 76.4
CiPaw.03G265600 Carya illinoinensis HOM05D004257 ORTHO05D005202 3.7e-146 521.9 348 74.7
Prupe.8G222200 Prunus persica HOM05D004257 ORTHO05D005202 3.7e-146 521.9 359 74.9
Eucgr.K03257 Eucalyptus grandis HOM05D004257 ORTHO05D005202 1.1e-145 520.4 351 76.6
PGR044G0150 Punica granatum HOM05D004257 ORTHO05D005202 2.4e-145 519.2 351 76.9
Haze_24645 Corylus avellana HOM05D004257 ORTHO05D005202 3.1e-145 518.8 376 71.3
Gohir.A11G131450 Gossypium hirsutum HOM05D004257 ORTHO05D005202 5.3e-145 518.1 350 76.3
MD10G1182800 Malus domestica HOM05D004257 ORTHO05D005202 2.0e-144 516.2 363 74.1
BcaC08g44693 Brassica carinata HOM05D004257 ORTHO05D005202 2.6e-144 515.8 348 73.0
C06p22290 Brassica napus HOM05D004257 ORTHO05D005202 2.6e-144 515.8 348 73.0
BolC6t37415H Brassica oleracea HOM05D004257 ORTHO05D005202 2.6e-144 515.8 348 73.3
MSTRG.11529 Avicennia marina HOM05D004257 ORTHO05D005202 3.4e-144 515.4 331 77.9
Cpa.g.sc473.3 Carica papaya HOM05D004257 ORTHO05D005202 3.4e-144 515.4 312 81.1
Gorai.007G147100 Gossypium raimondii HOM05D004257 ORTHO05D005202 3.4e-144 515.4 353 75.9
HanXRQChr17g0542071 Helianthus annuus HOM05D004257 ORTHO05D005202 7.7e-144 514.2 348 75.9
Gohir.D11G137300 Gossypium hirsutum HOM05D004257 ORTHO05D005202 1.0e-143 513.8 353 75.6
MD05G1195500 Malus domestica HOM05D004257 ORTHO05D005202 1.0e-143 513.8 328 78.4
CiPaw.04G187400 Carya illinoinensis HOM05D004257 ORTHO05D005202 1.7e-143 513.1 348 73.9
AL5G35770 Arabidopsis lyrata HOM05D004257 ORTHO05D005202 5.0e-143 511.5 351 73.5
Lsat_1_v5_gn_3_39581 Lactuca sativa HOM05D004257 ORTHO05D005202 5.0e-143 511.5 349 74.5
Aa31sc35G30 Aethionema arabicum HOM05D004257 ORTHO05D005202 6.5e-143 511.1 348 74.1
AT3G54690 Arabidopsis thaliana HOM05D004257 ORTHO05D005202 6.5e-143 511.1 351 73.5
Medtr7g097060 Medicago truncatula HOM05D004257 ORTHO05D005202 6.5e-143 511.1 348 74.4
Psat3g056800 Pisum sativum HOM05D004257 ORTHO05D005202 6.5e-143 511.1 348 74.4
BcaC02g09050 Brassica carinata HOM05D004257 ORTHO05D005202 1.1e-142 510.4 348 74.1
C04p37820 Brassica napus HOM05D004257 ORTHO05D005202 1.1e-142 510.4 348 74.1
BolC4t25358H Brassica oleracea HOM05D004257 ORTHO05D005202 1.1e-142 510.4 348 74.1
CSS0001153 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.1e-142 510.4 348 75.9
BcaB02g07726 Brassica carinata HOM05D004257 ORTHO05D005202 1.9e-142 509.6 349 73.6
Phvul.001G161500 Phaseolus vulgaris HOM05D004257 ORTHO05D005202 2.5e-142 509.2 348 72.7
arahy.Tifrunner.gnm1.ann1.63G7RJ Arachis hypogaea HOM05D004257 ORTHO05D005202 3.2e-142 508.8 348 74.1
VMungo1383G3387 Vigna mungo HOM05D004257 ORTHO05D005202 5.5e-142 508.1 348 72.4
Ca_08681_v3 Cicer arietinum L. HOM05D004257 ORTHO05D005202 1.2e-141 506.9 352 72.4
CARHR164610 Cardamine hirsuta HOM05D004257 ORTHO05D005202 2.1e-141 506.1 354 72.9
Thhalv10010498m.g Eutrema salsugineum HOM05D004257 ORTHO05D005202 2.7e-141 505.8 353 72.5
A04p05160 Brassica napus HOM05D004257 ORTHO05D005202 4.7e-141 505.0 348 72.7
BraA04t16226Z Brassica rapa HOM05D004257 ORTHO05D005202 4.7e-141 505.0 348 72.7
Carub.0005s2129 Capsella rubella HOM05D004257 ORTHO05D005202 1.4e-140 503.4 355 71.8
Glyma.19G165400 Glycine max HOM05D004257 ORTHO05D005202 3.0e-140 502.3 349 71.6
Lj1g0005279 Lotus japonicus HOM05D004257 ORTHO05D005202 3.9e-140 501.9 351 71.8
Sp5g07760 Schrenkiella parvula HOM05D004257 ORTHO05D005202 2.0e-139 499.6 354 72.3
ATR0736G010 Amborella trichopoda HOM05D004257 ORTHO05D005202 1.3e-138 496.9 348 72.1
Lalb_Chr01g0019631 Lupinus albus HOM05D004257 ORTHO05D005202 1.3e-138 496.9 348 72.1
arahy.Tifrunner.gnm1.ann1.BG7UA0 Arachis hypogaea HOM05D004257 ORTHO05D005202 2.8e-138 495.7 369 69.9
CSS0049630 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 3.1e-137 492.3 351 74.6
HPP92_017366 Vanilla planifolia HOM05D004257 ORTHO05D005202 3.2e-134 482.3 349 70.5
TPR.G7131 Trifolium pratense HOM05D004257 ORTHO05D005202 4.0e-132 475.3 393 65.6
CDE04G1210 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 4.4e-131 471.9 283 80.2
BraA07t29902Z Brassica rapa HOM05D004257 ORTHO05D005202 4.8e-130 468.4 348 69.0
HPP92_010358 Vanilla planifolia HOM05D004257 ORTHO05D005202 1.1e-129 467.2 349 67.9
GSVIVG01028350001 Vitis vinifera HOM05D004257 ORTHO05D005202 1.4e-129 466.8 348 70.1
Zm00001eb207770 Zea mays HOM05D004257 ORTHO05D005202 2.0e-128 463.0 352 67.6
Mapoly0023s0132 Marchantia polymorpha HOM05D004257 ORTHO05D005202 2.7e-128 462.6 324 69.1
Zm00001eb232580 Zea mays HOM05D004257 ORTHO05D005202 5.9e-128 461.5 352 67.0
CSS0045427 Camellia sinensis var. sinensis HOM05D004257 ORTHO05D005202 1.3e-127 460.3 351 71.8
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 2.9e-127 459.1 326 71.8
CDE02G1046 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 5.0e-127 458.4 325 72.9
unitig_0.g1405 Utricularia gibba HOM05D004257 ORTHO05D005202 5.0e-127 458.4 349 70.2
BcaC05g28242 Brassica carinata HOM05D004257 ORTHO05D005202 4.2e-126 455.3 348 67.8
BolC5t33007H Brassica oleracea HOM05D004257 ORTHO05D005202 4.2e-126 455.3 348 67.8
Os02g0158300 Oryza sativa ssp. japonica HOM05D004257 ORTHO05D005202 4.2e-126 455.3 352 66.8
AagrBONN_evm.TU.Sc2ySwM_344.3818 Anthoceros agrestis HOM05D004257 ORTHO05D005202 6.1e-125 451.4 323 68.7
AagrBONN_evm.TU.Sc2ySwM_344.1200 Anthoceros agrestis HOM05D004257 ORTHO05D005202 8.0e-125 451.1 320 68.4
SalBow5G3197 Salvia bowleyana HOM05D004257 ORTHO05D005202 7.5e-123 444.5 300 75.7
SalBow5G4297 Salvia bowleyana HOM05D004257 ORTHO05D005202 7.5e-123 444.5 300 75.7
unitig_61.g26464 Utricularia gibba HOM05D004257 ORTHO05D005202 1.3e-122 443.7 335 69.9
SMO367G0216 Selaginella moellendorffii HOM05D004257 ORTHO05D005202 1.8e-121 439.9 318 67.0
Pp3c23_13620 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.8e-116 421.4 340 62.4
CBR_g20340 Chara braunii HOM05D004257 ORTHO05D005202 2.4e-113 412.9 333 62.2
Pp3c5_14840 Physcomitrium patens HOM05D004257 ORTHO05D005202 2.4e-113 412.9 348 60.3
EL10Ac4g09002 Beta vulgaris HOM05D004257 ORTHO05D005202 7.0e-113 411.4 278 74.8
PSO470G0001 Papaver somniferum HOM05D004257 ORTHO05D005202 3.6e-109 399.1 215 95.3
ECA246G4101 Erigeron canadensis HOM05D004257 ORTHO05D005202 5.7e-107 391.7 231 81.8
CDE02G2420 Ceratophyllum demersum HOM05D004257 ORTHO05D005202 9.8e-99 364.4 228 76.8
C05p42800 Brassica napus HOM05D004257 ORTHO05D005202 5.0e-95 352.1 256 68.8
BcaB02g08451 Brassica carinata HOM05D004257 ORTHO05D005202 5.2e-92 342.0 199 82.4
Pp3c24_11040 Physcomitrium patens HOM05D004257 ORTHO05D005202 1.9e-86 323.6 298 57.4
CAN.G65.83 Capsicum annuum HOM05D004257 ORTHO05D005202 6.2e-77 292.0 248 61.7
SEGI_22917 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 4.3e-70 269.2 185 68.1
SEGI_29481 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 4.3e-70 269.2 185 68.1
SGA_v2.0_scaffold25G10776 Striga asiatica HOM05D004257 ORTHO05D005202 7.3e-70 268.5 185 75.1
AagrBONN_evm.TU.Sc2ySwM_228.5393 Anthoceros agrestis HOM05D004257 ORTHO05D005202 3.2e-57 226.5 165 64.8
A07p22230 Brassica napus HOM05D004257 ORTHO05D005202 1.3e-55 221.1 131 81.7
SEGI_04972 Sequoiadendron giganteum HOM05D004257 ORTHO05D005202 3.9e-55 219.5 122 84.4
Actinidia34751 Actinidia chinensis HOM05D000378 ORTHO05D005202 6.7e-55 218.8 119 86.6
Oeu036414.1 Olea europaea HOM05D004257 ORTHO05D005202 6.2e-53 212.2 123 82.9
BcaC07g39794 Brassica carinata HOM05D004257 ORTHO05D005202 1.8e-44 184.1 164 61.0
BolC8t50595H Brassica oleracea HOM05D004257 ORTHO05D005202 3.4e-43 179.9 164 60.4
C08p29840 Brassica napus HOM05D004257 ORTHO05D005202 1.1e-41 174.9 164 59.1
AagrBONN_evm.TU.Sc2ySwM_228.5394 Anthoceros agrestis HOM05D004257 ORTHO05D005202 8.7e-39 165.2 129 62.8
Peaxi162Scf00643g00656 Petunia axillaris HOM05D004257 ORTHO05D005202 2.2e-29 134.0 118 64.4
Aqoxy1G04111 Aquilegia oxysepala HOM05D004257 ORTHO05D004515 6.9e-28 129.0 179 44.7
Lsat_1_v5_gn_8_28701 Lactuca sativa HOM05D004257 ORTHO05D005202 1.3e-26 124.8 92 67.4
EL10Ac4g09003 Beta vulgaris HOM05D004257 ORTHO05D005202 1.9e-25 120.9 70 81.4
Rhsim05G0133300 Rhododendron simsii HOM05D004257 ORTHO05D005202 1.6e-24 117.9 92 67.4
Lj6g0021985 Lotus japonicus HOM05D004257 ORTHO05D236371 9.1e-20 102.1 78 62.8
Rhsim08G0010200 Rhododendron simsii HOM05D000535 ORTHO05D000427 5.9e-19 99.4 71 67.6
Pp3c2_23370 Physcomitrium patens HOM05D004257 ORTHO05D005202 6.5e-18 95.9 118 46.6
BcaB01g01067 Brassica carinata HOM05D004257 ORTHO05D092693 1.2e-14 85.1 78 55.1
Rhsim04G0042100 Rhododendron simsii HOM05D004257 ORTHO05D005202 9.7e-14 82.0 145 41.4
RhsimUnG0176200 Rhododendron simsii HOM05D000026 ORTHO05D000127 9.4e-09 65.5 51 62.7
Lsat_1_v5_gn_6_26721 Lactuca sativa HOM05D004257 ORTHO05D230427 1.8e-07 61.2 42 71.4
CDE04G3164 Ceratophyllum demersum HOM05D004257 ORTHO05D130150 4.0e-07 60.1 36 69.4


User provided reference genes

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