Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0549 Papaver somniferum HOM05D006355 ORTHO05D008284 6.6e-163 577.4 309 100.0
PSO063G0296 Papaver somniferum HOM05D006355 ORTHO05D008284 1.2e-153 546.6 309 94.8
Aqoxy7G01135 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.8e-67 260.4 333 48.3
Hma1.2p1_0672F.1_g200900 Hydrangea macrophylla HOM05D006355 ORTHO05D008284 1.3e-65 254.2 325 48.6
Lj4A288G20 Lonicera japonica HOM05D006355 ORTHO05D008284 3.7e-65 252.7 331 46.2
Nn8g38760 Nelumbo nucifera HOM05D006355 ORTHO05D008284 4.8e-65 252.3 332 47.0
Nn8g41302 Nelumbo nucifera HOM05D006355 ORTHO05D008284 4.8e-65 252.3 332 47.0
Cfa003044 Carpinus fangiana HOM05D006355 ORTHO05D008284 1.8e-64 250.4 325 47.7
Haze_25952 Corylus avellana HOM05D006355 ORTHO05D008284 7.0e-64 248.4 330 46.4
TAR413G0001 Trochodendron aralioides HOM05D006355 ORTHO05D008284 7.0e-64 248.4 336 46.4
Psat4g016280 Pisum sativum HOM05D006355 ORTHO05D008284 5.9e-63 245.4 322 46.9
Rhsim05G0014000 Rhododendron simsii HOM05D006355 ORTHO05D008284 7.7e-63 245.0 339 46.6
QL02p061794 Quercus lobata HOM05D006355 ORTHO05D008284 1.0e-62 244.6 333 46.2
ECA234G3558 Erigeron canadensis HOM05D006355 ORTHO05D008284 1.3e-62 244.2 312 47.8
HanXRQChr12g0354551 Helianthus annuus HOM05D006355 ORTHO05D008284 1.3e-62 244.2 306 47.4
QL02p061767 Quercus lobata HOM05D006355 ORTHO05D008284 1.3e-62 244.2 333 46.2
Gohir.D07G013200 Gossypium hirsutum HOM05D006355 ORTHO05D008284 1.7e-62 243.8 336 47.0
CiPaw.03G211000 Carya illinoinensis HOM05D006355 ORTHO05D008284 2.2e-62 243.4 325 45.8
Gohir.A07G013400 Gossypium hirsutum HOM05D006355 ORTHO05D008284 2.2e-62 243.4 333 47.1
Thecc.09G082800 Theobroma cacao HOM05D006355 ORTHO05D008284 3.8e-62 242.7 340 47.9
Gorai.001G013900 Gossypium raimondii HOM05D006355 ORTHO05D008284 6.5e-62 241.9 336 46.7
Hund08706 Selenicereus undatus HOM05D006355 ORTHO05D008284 6.5e-62 241.9 334 47.6
GSVIVG01015151001 Vitis vinifera HOM05D006355 ORTHO05D008284 8.5e-62 241.5 318 47.5
Peaxi162Scf00494g00027 Petunia axillaris HOM05D006355 ORTHO05D008284 1.5e-61 240.7 329 45.0
DCAR_024718 Daucus carota HOM05D006355 ORTHO05D008284 3.2e-61 239.6 325 46.5
TPR.G9437 Trifolium pratense HOM05D006355 ORTHO05D008284 4.2e-61 239.2 324 48.5
TWI34G0237 Tripterygium wilfordii HOM05D006355 ORTHO05D008284 9.4e-61 238.0 323 47.4
Migut.L01533 Erythranthe guttata HOM05D006355 ORTHO05D008284 2.1e-60 236.9 323 44.9
Cpa.g.sc28.115 Carica papaya HOM05D006355 ORTHO05D008284 4.7e-60 235.7 329 45.9
SGA_v2.0_scaffold21G09447 Striga asiatica HOM05D006355 ORTHO05D008284 4.7e-60 235.7 315 45.4
Nitab4.5_0002079g0060 Nicotiana tabacum HOM05D006355 ORTHO05D008284 8.0e-60 235.0 322 44.7
Lsat_1_v5_gn_5_143521 Lactuca sativa HOM05D006355 ORTHO05D008284 1.8e-59 233.8 308 47.4
Sed0027351 Sechium edule HOM05D006355 ORTHO05D008284 2.3e-59 233.4 329 44.1
Solyc07g041020.3 Solanum lycopersicum HOM05D006355 ORTHO05D008284 3.0e-59 233.0 322 44.7
Oeu010827.1 Olea europaea HOM05D006355 ORTHO05D008284 4.0e-59 232.6 316 46.8
Nitab4.5_0002842g0040 Nicotiana tabacum HOM05D006355 ORTHO05D008284 5.2e-59 232.3 331 47.1
CAN.G35.5 Capsicum annuum HOM05D006355 ORTHO05D008284 6.8e-59 231.9 315 44.8
Thhalv10022802m.g Eutrema salsugineum HOM05D006355 ORTHO05D008284 6.8e-59 231.9 306 43.5
Lj4g0004716 Lotus japonicus HOM05D006355 ORTHO05D008284 8.8e-59 231.5 327 45.6
Glyma.13G107200 Glycine max HOM05D006355 ORTHO05D008284 1.2e-58 231.1 323 44.0
arahy.Tifrunner.gnm1.ann1.I94R61 Arachis hypogaea HOM05D006355 ORTHO05D008284 1.5e-58 230.7 319 44.5
Eucgr.C00847 Eucalyptus grandis HOM05D006355 ORTHO05D008284 2.0e-58 230.3 326 43.9
BcaB03g16724 Brassica carinata HOM05D006355 ORTHO05D008284 2.6e-58 229.9 306 46.4
Glyma.17G052200 Glycine max HOM05D006355 ORTHO05D008284 2.6e-58 229.9 321 45.8
PGSC0003DMG400014101 Solanum tuberosum HOM05D006355 ORTHO05D008284 2.6e-58 229.9 320 44.7
Prupe.7G204300 Prunus persica HOM05D006355 ORTHO05D008284 5.7e-58 228.8 317 44.8
Sp3g32760 Schrenkiella parvula HOM05D006355 ORTHO05D008284 9.8e-58 228.0 316 47.2
Ca_21303_v3 Cicer arietinum L. HOM05D006355 ORTHO05D008284 1.7e-57 227.3 324 44.8
FvH4_1g08060 Fragaria vesca HOM05D006355 ORTHO05D008284 1.7e-57 227.3 321 46.4
FAN19G0491 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.7e-57 227.3 321 46.4
Manes.16G098900 Manihot esculenta HOM05D006355 ORTHO05D008284 1.7e-57 227.3 332 43.7
Sopen07g020150 Solanum pennellii HOM05D006355 ORTHO05D008284 2.8e-57 226.5 320 43.8
CARHR109830 Cardamine hirsuta HOM05D006355 ORTHO05D008284 4.8e-57 225.7 308 45.5
RcHm_v2.0_Chr2g0094111 Rosa chinensis HOM05D006355 ORTHO05D008284 6.3e-57 225.3 319 44.5
Medtr4g125720 Medicago truncatula HOM05D006355 ORTHO05D008284 8.3e-57 224.9 316 44.6
SalBow1G0189 Salvia bowleyana HOM05D006355 ORTHO05D008284 2.4e-56 223.4 329 42.2
CANSAT56G3969 Cannabis sativa HOM05D006355 ORTHO05D008284 4.1e-56 222.6 319 42.3
AUR62025162 Chenopodium quinoa HOM05D006355 ORTHO05D008284 4.1e-56 222.6 324 48.8
FAN23G1962 Fragaria x ananassa HOM05D006355 ORTHO05D008284 4.1e-56 222.6 321 46.1
FAN28G1606 Fragaria x ananassa HOM05D006355 ORTHO05D008284 4.1e-56 222.6 321 45.5
Lalb_Chr12g0199961 Lupinus albus HOM05D006355 ORTHO05D008284 4.1e-56 222.6 316 45.3
Zm00001eb357030 Zea mays HOM05D006355 ORTHO05D008284 4.1e-56 222.6 314 45.2
ATR0051G027 Amborella trichopoda HOM05D006355 ORTHO05D008284 7.0e-56 221.9 328 43.9
Duzib168G2189 Durio zibethinus HOM05D006355 ORTHO05D008284 7.0e-56 221.9 331 44.7
CANSAT56G1278 Cannabis sativa HOM05D006355 ORTHO05D008284 9.1e-56 221.5 319 42.3
AUR62029015 Chenopodium quinoa HOM05D006355 ORTHO05D008284 9.1e-56 221.5 275 51.3
Atru.chr7.1648 Acer truncatum HOM05D006355 ORTHO05D008284 1.2e-55 221.1 333 44.7
CDE06G0893 Ceratophyllum demersum HOM05D006355 ORTHO05D008284 1.6e-55 220.7 340 43.5
Cc06_g11800 Coffea canephora HOM05D006355 ORTHO05D008284 1.6e-55 220.7 340 43.2
Potri.006G146200 Populus trichocarpa HOM05D006355 ORTHO05D008284 2.0e-55 220.3 333 45.0
Carub.0003s3364 Capsella rubella HOM05D006355 ORTHO05D008284 2.7e-55 219.9 312 44.2
Os01g0583200 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D008284 4.5e-55 219.2 326 44.5
Phvul.003G133900 Phaseolus vulgaris HOM05D006355 ORTHO05D008284 4.5e-55 219.2 334 44.6
ClCG11G001610 Citrullus lanatus HOM05D006355 ORTHO05D008284 7.7e-55 218.4 333 41.4
FAN26G2768 Fragaria x ananassa HOM05D006355 ORTHO05D008284 1.0e-54 218.0 333 44.1
Ciclev10008972m.g Citrus clementina HOM05D006355 ORTHO05D008284 2.9e-54 216.5 323 42.1
CsaV3_2G001300 Cucumis sativus L. HOM05D006355 ORTHO05D008284 2.9e-54 216.5 332 41.6
FAN26G1509 Fragaria x ananassa HOM05D006355 ORTHO05D008284 5.0e-54 215.7 333 44.1
C07p02840 Brassica napus HOM05D006355 ORTHO05D008284 6.5e-54 215.3 306 44.8
BolC7t40681H Brassica oleracea HOM05D006355 ORTHO05D008284 6.5e-54 215.3 306 44.8
Sc08g0008680 Simmondsia chinensis HOM05D006355 ORTHO05D008284 6.5e-54 215.3 334 44.3
MBI11_g07532_MAGBIO Magnolia biondii HOM05D006355 ORTHO05D008284 8.5e-54 214.9 338 42.9
MELO3C004639.2 Cucumis melo HOM05D006355 ORTHO05D008284 1.1e-53 214.5 332 41.6
PGR142G1993 Punica granatum HOM05D006355 ORTHO05D008284 1.5e-53 214.2 311 44.4
A07p01380 Brassica napus HOM05D006355 ORTHO05D008284 3.2e-53 213.0 306 44.1
BraA07t27933Z Brassica rapa HOM05D006355 ORTHO05D008284 4.2e-53 212.6 306 44.8
Dinv36798 Davidia involucrata HOM05D006355 ORTHO05D008284 4.2e-53 212.6 272 51.1
vmacro17166 Vaccinium macrocarpon HOM05D006355 ORTHO05D008284 4.2e-53 212.6 306 41.5
BcaC06g36568 Brassica carinata HOM05D006355 ORTHO05D008284 7.2e-53 211.8 309 45.3
Actinidia25231 Actinidia chinensis HOM05D006355 ORTHO05D008284 6.1e-52 208.8 158 67.1
AT2G19385 Arabidopsis thaliana HOM05D006355 ORTHO05D008284 1.4e-51 207.6 311 41.5
Aa31LG8G16390 Aethionema arabicum HOM05D006355 ORTHO05D008284 1.2e-50 204.5 311 44.4
AL3G48940 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 4.4e-50 202.6 312 40.7
Sabra06G0115400 Salix brachista HOM05D006355 ORTHO05D008284 2.8e-49 199.9 366 39.3
SEGI_15381 Sequoiadendron giganteum HOM05D006355 ORTHO05D008284 2.4e-48 196.8 310 42.9
EL10Ac8g19156 Beta vulgaris HOM05D006355 ORTHO05D008284 4.1e-48 196.1 405 38.5
HPP92_009733 Vanilla planifolia HOM05D006355 ORTHO05D008284 1.9e-45 187.2 328 40.9
COL.COLO4_18155 Corchorus olitorius HOM05D006355 ORTHO05D008284 1.2e-44 184.5 343 42.3
Pp3c3_280 Physcomitrium patens HOM05D006355 ORTHO05D008284 8.0e-44 181.8 297 41.1
arahy.Tifrunner.gnm1.ann1.2VE13Z Arachis hypogaea HOM05D006355 ORTHO05D008284 1.4e-43 181.0 319 40.1
Gohir.A05G032100 Gossypium hirsutum HOM05D006355 ORTHO05D008284 3.0e-43 179.9 319 40.8
MD15G1212400 Malus domestica HOM05D006355 ORTHO05D008284 8.9e-43 178.3 332 40.1
MD02G1085300 Malus domestica HOM05D006355 ORTHO05D008284 1.2e-42 177.9 330 40.0
SMO200G0211 Selaginella moellendorffii HOM05D006355 ORTHO05D008284 3.4e-42 176.4 314 36.3
VMungo1215G0260 Vigna mungo HOM05D006355 ORTHO05D008284 2.7e-39 166.8 300 41.7
CBR_g39727 Chara braunii HOM05D006355 ORTHO05D008284 4.6e-39 166.0 181 51.9
AagrBONN_evm.TU.Sc2ySwM_228.3887 Anthoceros agrestis HOM05D006355 ORTHO05D008284 1.0e-38 164.9 144 54.2
Mapoly0108s0017 Marchantia polymorpha HOM05D006355 ORTHO05D008284 1.2e-36 157.9 280 38.9
Carub.0003s3362 Capsella rubella HOM05D006355 ORTHO05D008284 2.4e-32 143.7 196 41.8
AT2G19380 Arabidopsis thaliana HOM05D006355 ORTHO05D011679 4.3e-29 132.9 204 39.2
AL3G48950 Arabidopsis lyrata HOM05D006355 ORTHO05D008284 4.7e-28 129.4 209 39.2
PRCOL_00003845 Prasinoderma coloniale HOM05D006355 ORTHO05D008284 1.8e-27 127.5 139 47.5
Cre17.g701050 Chlamydomonas reinhardtii HOM05D006355 ORTHO05D008284 4.4e-26 122.9 138 45.7
MCO07G733 Micromonas commoda HOM05D006355 ORTHO05D008284 2.3e-22 110.5 139 43.9
unitig_8.g3528 Utricularia gibba HOM05D001583 ORTHO05D001900 1.9e-21 107.5 300 32.3
SGA_v2.0_scaffold23G10049 Striga asiatica HOM05D006355 ORTHO05D008284 9.5e-21 105.1 118 47.5
SHI23456 Sapria himalayana HOM05D006355 ORTHO05D008284 8.9e-19 98.6 57 70.2
SHI30666 Sapria himalayana HOM05D006355 ORTHO05D008284 1.5e-18 97.8 57 70.2
Aqoxy7G02122 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 4.3e-13 79.7 226 32.7
CSS0037261 Camellia sinensis var. sinensis HOM05D006355 ORTHO05D008284 5.6e-13 79.3 187 39.0
Migut.B00896 Erythranthe guttata HOM05D002142 ORTHO05D001189 5.6e-13 79.3 122 44.3
SHI30664 Sapria himalayana HOM05D006355 ORTHO05D008284 1.1e-11 75.1 193 34.2
Aqoxy4G01928 Aquilegia oxysepala HOM05D006355 ORTHO05D008284 1.8e-11 74.3 226 31.9
Os01g0583300 Oryza sativa ssp. japonica HOM05D006355 ORTHO05D300111 1.0e-06 58.5 52 59.6


User provided reference genes

Program Settings