Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0213 Papaver somniferum HOM05D001476 ORTHO05D006149 0.0e+00 1647.1 853 100.0
PSO210G1670 Papaver somniferum HOM05D001476 ORTHO05D006149 0.0e+00 1621.7 853 97.2
TAR402G0001 Trochodendron aralioides HOM05D001476 ORTHO05D006149 0.0e+00 1318.5 850 80.5
GSVIVG01034014001 Vitis vinifera HOM05D001476 ORTHO05D006149 0.0e+00 1283.5 848 77.6
Dinv35515 Davidia involucrata HOM05D001476 ORTHO05D006149 0.0e+00 1280.8 853 78.3
Actinidia13780 Actinidia chinensis HOM05D001476 ORTHO05D006149 0.0e+00 1267.3 861 77.7
Nn2g13602 Nelumbo nucifera HOM05D001476 ORTHO05D006149 0.0e+00 1266.9 850 77.4
CSS0024803 Camellia sinensis var. sinensis HOM05D001476 ORTHO05D006149 0.0e+00 1262.3 849 78.2
Thecc.05G022500 Theobroma cacao HOM05D001476 ORTHO05D006149 0.0e+00 1262.3 849 77.0
Hma1.2p1_0763F.1_g214610 Hydrangea macrophylla HOM05D001476 ORTHO05D006149 0.0e+00 1256.1 857 77.0
Aqoxy1G00720 Aquilegia oxysepala HOM05D001476 ORTHO05D006149 0.0e+00 1255.4 854 76.6
Gorai.006G180300 Gossypium raimondii HOM05D001476 ORTHO05D006149 0.0e+00 1245.0 838 76.7
PGR031G2805 Punica granatum HOM05D001476 ORTHO05D006149 0.0e+00 1243.8 842 76.2
Gohir.D09G158600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1243.4 824 77.5
Ciclev10011050m.g Citrus clementina HOM05D001476 ORTHO05D006149 0.0e+00 1241.5 863 75.1
Duzib128G0639 Durio zibethinus HOM05D001476 ORTHO05D006149 0.0e+00 1239.2 829 76.8
Gohir.A09G163100 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1238.4 824 77.2
Eucgr.B02781 Eucalyptus grandis HOM05D001476 ORTHO05D006149 0.0e+00 1231.9 837 76.2
TWI74G1595 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 0.0e+00 1228.4 841 76.0
ClCG04G007260 Citrullus lanatus HOM05D001476 ORTHO05D006149 0.0e+00 1228.0 857 74.3
Manes.09G101900 Manihot esculenta HOM05D001476 ORTHO05D006149 0.0e+00 1225.7 857 74.0
MELO3C003223.2 Cucumis melo HOM05D001476 ORTHO05D006149 0.0e+00 1224.2 863 74.0
Prupe.6G270500 Prunus persica HOM05D001476 ORTHO05D006149 0.0e+00 1224.2 851 74.4
Potri.006G096100 Populus trichocarpa HOM05D001476 ORTHO05D006149 0.0e+00 1223.4 851 75.1
CsaV3_4G025980 Cucumis sativus L. HOM05D001476 ORTHO05D006149 0.0e+00 1221.5 863 73.7
Potri.016G110800 Populus trichocarpa HOM05D001476 ORTHO05D006149 0.0e+00 1219.9 850 74.2
Gorai.012G111700 Gossypium raimondii HOM05D001476 ORTHO05D006149 0.0e+00 1219.5 824 75.7
TWI77G0827 Tripterygium wilfordii HOM05D001476 ORTHO05D006149 0.0e+00 1219.5 886 72.7
Cpa.g.sc56.111 Carica papaya HOM05D001476 ORTHO05D006149 0.0e+00 1210.3 866 73.2
FvH4_6g12060 Fragaria vesca HOM05D001476 ORTHO05D006149 0.0e+00 1210.3 883 71.1
Gohir.D04G128600 Gossypium hirsutum HOM05D001476 ORTHO05D006149 0.0e+00 1210.3 824 75.4
Migut.J00228 Erythranthe guttata HOM05D001476 ORTHO05D006149 0.0e+00 1208.7 882 73.4
Sed0003764 Sechium edule HOM05D001476 ORTHO05D006149 0.0e+00 1206.0 857 73.5
Rhsim05G0205700 Rhododendron simsii HOM05D001476 ORTHO05D006149 0.0e+00 1201.8 855 74.3
Carub.0003s0826 Capsella rubella HOM05D001476 ORTHO05D006149 0.0e+00 1200.3 875 71.9
Lj3g0014893 Lotus japonicus HOM05D001476 ORTHO05D006149 0.0e+00 1197.2 842 73.6
BcaC09g48009 Brassica carinata HOM05D001476 ORTHO05D006149 0.0e+00 1194.9 891 71.2
Haze_20947 Corylus avellana HOM05D001476 ORTHO05D006149 0.0e+00 1194.5 895 70.9
Sp3g07550 Schrenkiella parvula HOM05D001476 ORTHO05D006149 0.0e+00 1194.1 859 73.1
Thhalv10020022m.g Eutrema salsugineum HOM05D001476 ORTHO05D006149 0.0e+00 1192.6 875 71.1
AT3G09090 Arabidopsis thaliana HOM05D001476 ORTHO05D006149 0.0e+00 1190.6 876 70.9
SGA_v2.0_scaffold85G26765 Striga asiatica HOM05D001476 ORTHO05D006149 0.0e+00 1187.2 877 71.5
ECA236G3430 Erigeron canadensis HOM05D001476 ORTHO05D006149 0.0e+00 1186.8 860 72.7
AL3G20170 Arabidopsis lyrata HOM05D001476 ORTHO05D006149 0.0e+00 1185.6 882 70.9
Ca_23816_v3 Cicer arietinum L. HOM05D001476 ORTHO05D006149 0.0e+00 1185.2 823 74.0
Nitab4.5_0000008g0700 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1183.3 853 72.9
BolC1t05473H Brassica oleracea HOM05D001476 ORTHO05D006149 0.0e+00 1182.9 883 70.9
CARHR083470 Cardamine hirsuta HOM05D001476 ORTHO05D006149 0.0e+00 1182.5 872 71.1
Nitab4.5_0011723g0020 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1182.2 853 72.9
SGA_v2.0_scaffold22G09908 Striga asiatica HOM05D001476 ORTHO05D006149 0.0e+00 1180.2 872 70.9
THA.LOC104816221 Tarenaya hassleriana HOM05D001476 ORTHO05D006149 0.0e+00 1176.8 917 68.3
Atru.chr8.2151 Acer truncatum HOM05D001476 ORTHO05D006149 0.0e+00 1176.0 886 70.0
Sc24g0002110 Simmondsia chinensis HOM05D001476 ORTHO05D006149 0.0e+00 1175.2 908 68.2
BcaC09g48054 Brassica carinata HOM05D001476 ORTHO05D006149 0.0e+00 1174.8 896 70.2
Cc06_g01690 Coffea canephora HOM05D001476 ORTHO05D006149 0.0e+00 1174.1 867 70.0
Sed0007041 Sechium edule HOM05D001476 ORTHO05D006149 0.0e+00 1172.5 899 69.2
FAN05G2912 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1171.8 883 69.6
Glyma.03G076900 Glycine max HOM05D001476 ORTHO05D006149 0.0e+00 1167.5 883 69.8
Aa31LG3G1620 Aethionema arabicum HOM05D001476 ORTHO05D006149 0.0e+00 1164.1 883 70.3
Nitab4.5_0004912g0100 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1163.3 869 70.4
SalBow5G4659 Salvia bowleyana HOM05D001476 ORTHO05D006149 0.0e+00 1163.3 936 67.1
FAN14G1008 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1162.1 898 68.6
Glyma.01G111300 Glycine max HOM05D001476 ORTHO05D006149 0.0e+00 1162.1 865 70.6
CiPaw.09G205700 Carya illinoinensis HOM05D001476 ORTHO05D006149 0.0e+00 1161.4 878 71.3
FAN14G2619 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1161.4 898 68.6
Oeu004614.2 Olea europaea HOM05D001476 ORTHO05D006149 0.0e+00 1161.4 869 71.2
EL10Ac5g11563 Beta vulgaris HOM05D001476 ORTHO05D006149 0.0e+00 1161.0 926 67.5
HanXRQChr16g0507821 Helianthus annuus HOM05D001476 ORTHO05D006149 0.0e+00 1160.6 884 69.6
FAN02G1993 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1160.2 883 69.3
FAN09G2729 Fragaria x ananassa HOM05D001476 ORTHO05D006149 0.0e+00 1160.2 898 68.5
ATR0618G171 Amborella trichopoda HOM05D001476 ORTHO05D006149 0.0e+00 1159.4 805 75.2
Sopen10g034520 Solanum pennellii HOM05D001476 ORTHO05D006149 0.0e+00 1159.4 870 70.8
CANSAT35G0098 Cannabis sativa HOM05D001476 ORTHO05D006149 0.0e+00 1157.9 855 71.2
BraA01t04314Z Brassica rapa HOM05D001476 ORTHO05D006149 0.0e+00 1156.7 899 69.4
Medtr4g014960 Medicago truncatula HOM05D001476 ORTHO05D006149 0.0e+00 1156.7 875 69.6
DCAR_024038 Daucus carota HOM05D001476 ORTHO05D006149 0.0e+00 1152.9 867 70.1
Peaxi162Scf00009g02022 Petunia axillaris HOM05D001476 ORTHO05D006149 0.0e+00 1152.9 874 69.9
A05p39780 Brassica napus HOM05D001476 ORTHO05D006149 0.0e+00 1152.5 903 68.5
C05p58820 Brassica napus HOM05D001476 ORTHO05D006149 0.0e+00 1151.3 903 69.2
VMungo0331G0441 Vigna mungo HOM05D001476 ORTHO05D006149 0.0e+00 1149.4 887 68.3
Solyc09g013130.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 0.0e+00 1144.4 898 68.4
BraA05t22762Z Brassica rapa HOM05D001476 ORTHO05D006149 0.0e+00 1142.9 919 67.2
Psat0s2261g0240 Pisum sativum HOM05D001476 ORTHO05D006149 0.0e+00 1142.9 894 67.9
HPP92_018041 Vanilla planifolia HOM05D001476 ORTHO05D006149 0.0e+00 1141.7 871 68.0
CAN.G355.19 Capsicum annuum HOM05D001476 ORTHO05D006149 0.0e+00 1137.1 887 68.8
PGSC0003DMG400011017 Solanum tuberosum HOM05D001476 ORTHO05D006149 0.0e+00 1137.1 870 69.4
Sopen09g006990 Solanum pennellii HOM05D001476 ORTHO05D006149 0.0e+00 1135.2 898 68.2
TPR.G5272 Trifolium pratense HOM05D001476 ORTHO05D006149 0.0e+00 1135.2 876 69.5
Phvul.010G008300 Phaseolus vulgaris HOM05D001476 ORTHO05D006149 0.0e+00 1134.8 925 65.4
Peaxi162Scf00141g00813 Petunia axillaris HOM05D001476 ORTHO05D006149 0.0e+00 1133.2 825 72.6
MD04G1146700 Malus domestica HOM05D001476 ORTHO05D006149 0.0e+00 1132.1 850 70.7
Nitab4.5_0000652g0160 Nicotiana tabacum HOM05D001476 ORTHO05D006149 0.0e+00 1131.3 834 71.1
MD12G1159900 Malus domestica HOM05D001476 ORTHO05D006149 0.0e+00 1123.6 896 68.3
Rhsim05G0205800 Rhododendron simsii HOM05D001476 ORTHO05D006149 0.0e+00 1115.1 900 66.3
BcaC05g29640 Brassica carinata HOM05D001476 ORTHO05D006149 0.0e+00 1114.4 899 67.4
Zm00001eb063130 Zea mays HOM05D001476 ORTHO05D006149 0.0e+00 1113.2 846 67.6
CDE04G3748 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 0.0e+00 1112.8 848 69.5
Lsat_1_v5_gn_8_99901 Lactuca sativa HOM05D001476 ORTHO05D006149 0.0e+00 1112.1 818 72.0
Cfa017258 Carpinus fangiana HOM05D001476 ORTHO05D002681 0.0e+00 1110.9 839 71.2
Lalb_Chr07g0193321 Lupinus albus HOM05D001476 ORTHO05D006149 0.0e+00 1103.2 946 63.0
Lj3A957T35 Lonicera japonica HOM05D001476 ORTHO05D006149 0.0e+00 1093.6 952 65.0
unitig_699.g19385 Utricularia gibba HOM05D001476 ORTHO05D006149 0.0e+00 1093.6 851 69.1
Duzib106G0695 Durio zibethinus HOM05D001476 ORTHO05D006149 0.0e+00 1090.1 847 67.3
PGSC0003DMG400020350 Solanum tuberosum HOM05D001476 ORTHO05D006149 0.0e+00 1083.6 1007 60.4
Os03g0825700 Oryza sativa ssp. japonica HOM05D001476 ORTHO05D006149 0.0e+00 1078.5 836 67.5
arahy.Tifrunner.gnm1.ann1.5UT5JQ Arachis hypogaea HOM05D001476 ORTHO05D006149 0.0e+00 1077.8 909 64.5
arahy.Tifrunner.gnm1.ann1.VBIR99 Arachis hypogaea HOM05D001476 ORTHO05D006149 0.0e+00 1075.5 909 64.5
Gohir.A04G088225 Gossypium hirsutum HOM05D001476 ORTHO05D006149 2.2e-309 1065.4 740 72.6
vmacro20235 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 1.4e-308 1062.8 821 68.1
CDE03G0023 Ceratophyllum demersum HOM05D001476 ORTHO05D006149 2.0e-302 1042.3 852 64.0
Oeu044363.1 Olea europaea HOM05D001476 ORTHO05D006149 3.8e-293 1011.5 857 65.0
Ah.11g045320 Amaranthus hybridus HOM05D001476 ORTHO05D006149 2.3e-282 975.7 908 60.8
Solyc10g085060.3 Solanum lycopersicum HOM05D001476 ORTHO05D006149 7.9e-275 950.7 722 68.4
Lsat_1_v5_gn_0_44361 Lactuca sativa HOM05D001476 ORTHO05D006149 1.0e-274 950.3 709 69.5
MSTRG.5600 Avicennia marina HOM05D001476 ORTHO05D006149 2.4e-271 939.1 694 72.6
RcHm_v2.0_Chr3g0463911 Rosa chinensis HOM05D001476 ORTHO05D006149 1.3e-266 923.3 694 71.0
Pp3c20_710 Physcomitrium patens HOM05D001476 ORTHO05D006149 3.3e-265 918.7 863 55.5
TAR636G2437 Trochodendron aralioides HOM05D001476 ORTHO05D006149 1.5e-262 909.8 506 86.6
Sabra06G0073800 Salix brachista HOM05D001476 ORTHO05D002681 4.5e-262 908.3 839 61.9
CAN.G1297.2 Capsicum annuum HOM05D001476 ORTHO05D006149 1.4e-260 903.3 596 76.0
SMO145G0033 Selaginella moellendorffii HOM05D001476 ORTHO05D006149 1.5e-257 893.3 845 57.4
Mapoly0103s0063 Marchantia polymorpha HOM05D001476 ORTHO05D006149 9.7e-257 890.6 903 54.3
Sabra16G0107400 Salix brachista HOM05D001476 ORTHO05D006149 2.9e-253 879.0 938 55.1
SEGI_02222 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 1.3e-245 853.6 722 63.6
AagrBONN_evm.TU.Sc2ySwM_369.563 Anthoceros agrestis HOM05D001476 ORTHO05D006149 7.3e-188 661.8 628 57.5
SHI12782 Sapria himalayana HOM05D001476 ORTHO05D006149 8.4e-176 621.7 518 66.2
TPR.G6686 Trifolium pratense HOM05D001476 ORTHO05D006149 3.6e-171 606.3 372 78.0
AUR62043525 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.4e-170 603.6 385 75.8
COL.COLO4_14599 Corchorus olitorius HOM05D001476 ORTHO05D006149 4.2e-167 592.8 353 81.0
AUR62044509 Chenopodium quinoa HOM05D001476 ORTHO05D006149 3.6e-163 579.7 342 79.8
AUR62043103 Chenopodium quinoa HOM05D001476 ORTHO05D006149 4.2e-159 566.2 362 75.1
AUR62043102 Chenopodium quinoa HOM05D001476 ORTHO05D006149 4.8e-155 552.7 534 62.0
vmacro17486 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 3.1e-154 550.1 464 64.0
CBR_g8542 Chara braunii HOM05D001476 ORTHO05D006149 3.4e-137 493.4 731 43.2
MCO10G178 Micromonas commoda HOM05D001476 ORTHO05D006149 3.4e-137 493.4 876 37.7
Cre04.g214097 Chlamydomonas reinhardtii HOM05D001476 ORTHO05D006149 1.6e-134 484.6 989 36.1
SHI12784 Sapria himalayana HOM05D001476 ORTHO05D006149 2.6e-121 440.7 306 70.6
BcaC09g47968 Brassica carinata HOM05D001476 ORTHO05D006149 1.4e-109 401.7 297 69.0
COL.COLO4_14600 Corchorus olitorius HOM05D001476 ORTHO05D006149 4.0e-109 400.2 491 52.1
AUR62043524 Chenopodium quinoa HOM05D001476 ORTHO05D006149 2.0e-108 397.9 453 56.1
PRCOL_00002974 Prasinoderma coloniale HOM05D001476 ORTHO05D006149 7.2e-103 379.4 991 30.9
TAR636G0462 Trochodendron aralioides HOM05D001476 ORTHO05D006149 4.4e-92 343.6 328 66.8
Actinidia29132 Actinidia chinensis HOM05D001476 ORTHO05D006149 9.8e-92 342.4 617 39.5
RcHm_v2.0_Chr3g0463901 Rosa chinensis HOM05D001476 ORTHO05D006149 1.5e-71 275.4 166 80.7
Dinv37085 Davidia involucrata HOM05D001476 ORTHO05D002681 4.9e-51 207.2 330 39.7
BolC5t34534H Brassica oleracea HOM05D001476 ORTHO05D002681 3.4e-44 184.5 143 77.6
Hund31411 Selenicereus undatus HOM05D001476 ORTHO05D006149 2.7e-41 174.9 105 81.0
SEGI_09667 Sequoiadendron giganteum HOM05D001476 ORTHO05D006149 4.8e-38 164.1 107 72.0
vmacro17485 Vaccinium macrocarpon HOM05D001476 ORTHO05D006149 3.1e-37 161.4 107 72.0
MSTRG.19033 Avicennia marina HOM05D001476 ORTHO05D031643 1.1e-29 136.3 111 64.0
Rhsim09G0090000 Rhododendron simsii HOM05D001476 ORTHO05D034934 2.6e-20 105.1 77 68.8
TAR629G0215 Trochodendron aralioides HOM05D000393 ORTHO05D000275 2.2e-19 102.1 61 82.0
FAN23G1187 Fragaria x ananassa HOM05D001476 ORTHO05D031643 1.9e-18 99.0 78 62.8
TAR381G0471 Trochodendron aralioides HOM05D000141 ORTHO05D000780 8.8e-16 90.1 97 60.8
TAR626G1231 Trochodendron aralioides HOM05D000393 ORTHO05D000275 5.3e-13 80.9 57 70.2
FAN03G3278 Fragaria x ananassa HOM05D004221 ORTHO05D004998 2.6e-12 78.6 89 47.2
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.4e-12 78.2 45 82.2
GSVIVG01021923001 Vitis vinifera HOM05D001476 ORTHO05D006149 5.9e-12 77.4 66 53.0
FAN19G0609 Fragaria x ananassa HOM05D014108 ORTHO05D015280 2.2e-11 75.5 87 48.3
TAR636G0366 Trochodendron aralioides HOM05D001476 ORTHO05D006149 7.2e-10 70.5 40 87.5
Rhsim05G0112000 Rhododendron simsii HOM05D047264 ORTHO05D021376 1.1e-07 63.2 58 55.2
TWI53G1805 Tripterygium wilfordii HOM05D001476 ORTHO05D031643 3.3e-07 61.6 52 57.7
MELO3C011527.2 Cucumis melo HOM05D001476 ORTHO05D034934 7.4e-07 60.5 41 68.3


User provided reference genes

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