Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO832G0057 Papaver somniferum HOM05D007352 ORTHO05D009389 3.1e-69 266.9 270 100.0
Nn2g12740 Nelumbo nucifera HOM05D007352 ORTHO05D009389 1.3e-46 191.8 274 80.3
Hma1.2p1_0430F.1_g151250 Hydrangea macrophylla HOM05D007352 ORTHO05D009389 1.3e-43 181.8 273 82.1
CSS0004060 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 2.9e-43 180.6 269 81.4
CSS0040101 Camellia sinensis var. sinensis HOM05D007352 ORTHO05D009389 2.9e-43 180.6 269 81.8
TAR636G0386 Trochodendron aralioides HOM05D007352 ORTHO05D009389 3.8e-43 180.3 274 80.7
TAR636G1169 Trochodendron aralioides HOM05D007352 ORTHO05D009389 3.8e-43 180.3 274 80.7
Lj9A311T59 Lonicera japonica HOM05D007352 ORTHO05D009389 6.5e-43 179.5 273 81.3
Rhsim08G0228600 Rhododendron simsii HOM05D007352 ORTHO05D009389 3.2e-42 177.2 269 80.7
Dinv27397 Davidia involucrata HOM05D007352 ORTHO05D009389 9.4e-42 175.6 273 81.7
CAN.G1143.23 Capsicum annuum HOM05D007352 ORTHO05D009389 2.7e-41 174.1 277 81.2
Peaxi162Scf00038g01145 Petunia axillaris HOM05D007352 ORTHO05D009389 3.6e-41 173.7 278 80.6
Aqoxy7G01368 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 4.7e-41 173.3 274 79.6
Nitab4.5_0004969g0060 Nicotiana tabacum HOM05D007352 ORTHO05D009389 6.1e-41 172.9 276 79.7
Sopen03g039940 Solanum pennellii HOM05D007352 ORTHO05D009389 7.9e-41 172.6 275 80.7
PGSC0003DMG400002522 Solanum tuberosum HOM05D007352 ORTHO05D009389 1.0e-40 172.2 275 80.7
vmacro18843 Vaccinium macrocarpon HOM05D007352 ORTHO05D009389 1.0e-40 172.2 269 81.8
Nitab4.5_0005085g0030 Nicotiana tabacum HOM05D007352 ORTHO05D009389 1.4e-40 171.8 276 79.7
Solyc03g121110.3 Solanum lycopersicum HOM05D007352 ORTHO05D009389 1.4e-40 171.8 275 80.4
Migut.L00048 Erythranthe guttata HOM05D007352 ORTHO05D009389 5.1e-40 169.9 264 82.2
Haze_15863 Corylus avellana HOM05D007352 ORTHO05D009389 2.6e-39 167.5 269 78.8
Medtr2g030540 Medicago truncatula HOM05D007352 ORTHO05D009389 5.7e-39 166.4 269 78.8
ECA232G1252 Erigeron canadensis HOM05D001329 ORTHO05D004946 7.4e-39 166.0 270 78.5
Lsat_1_v5_gn_4_98021 Lactuca sativa HOM05D007352 ORTHO05D009389 2.2e-38 164.5 270 78.9
Prupe.3G056800 Prunus persica HOM05D007352 ORTHO05D009389 2.2e-38 164.5 267 78.3
Gohir.D02G136200 Gossypium hirsutum HOM05D007352 ORTHO05D009389 3.7e-38 163.7 267 79.0
HanXRQChr11g0348741 Helianthus annuus HOM05D007352 ORTHO05D009389 6.3e-38 162.9 270 78.5
MBI04_g06993_MAGBIO Magnolia biondii HOM05D007352 ORTHO05D009389 6.3e-38 162.9 272 79.0
EL10Ac9g21188 Beta vulgaris HOM05D007352 ORTHO05D009389 8.2e-38 162.5 267 80.1
Ca_00856_v3 Cicer arietinum L. HOM05D007352 ORTHO05D009389 8.2e-38 162.5 269 77.7
HPP92_000532 Vanilla planifolia HOM05D007352 ORTHO05D009389 8.2e-38 162.5 269 77.7
Duzib251G0222 Durio zibethinus HOM05D007352 ORTHO05D009389 1.1e-37 162.2 269 79.9
arahy.Tifrunner.gnm1.ann1.Y4G0P0 Arachis hypogaea HOM05D007352 ORTHO05D009389 2.4e-37 161.0 269 78.4
Ciclev10025103m.g Citrus clementina HOM05D007352 ORTHO05D009389 3.1e-37 160.6 269 79.9
Psat1g166520 Pisum sativum HOM05D007352 ORTHO05D009389 3.1e-37 160.6 266 78.6
Gohir.A03G111600 Gossypium hirsutum HOM05D007352 ORTHO05D009389 4.1e-37 160.2 267 78.3
CDE05G2407 Ceratophyllum demersum HOM05D007352 ORTHO05D009389 5.3e-37 159.8 264 79.9
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 5.3e-37 159.8 267 78.7
A05p19210 Brassica napus HOM05D007352 ORTHO05D009389 6.9e-37 159.5 267 78.7
BraA05t20827Z Brassica rapa HOM05D007352 ORTHO05D009389 6.9e-37 159.5 267 78.3
Cpa.g.sc25.26 Carica papaya HOM05D007352 ORTHO05D009389 6.9e-37 159.5 270 77.8
COL.COLO4_27631 Corchorus olitorius HOM05D007352 ORTHO05D009389 6.9e-37 159.5 269 79.2
arahy.Tifrunner.gnm1.ann1.X8VU69 Arachis hypogaea HOM05D007352 ORTHO05D009389 9.1e-37 159.1 269 77.3
Lalb_Chr20g0120141 Lupinus albus HOM05D007352 ORTHO05D009389 1.5e-36 158.3 266 76.7
TPR.G26324 Trifolium pratense HOM05D007352 ORTHO05D009389 1.5e-36 158.3 269 77.0
Lj6g0022790 Lotus japonicus HOM05D007352 ORTHO05D009389 2.6e-36 157.5 270 77.0
MD09G1200200 Malus domestica HOM05D007352 ORTHO05D009389 2.6e-36 157.5 266 77.8
THA.LOC104810542 Tarenaya hassleriana HOM05D007352 ORTHO05D009389 2.6e-36 157.5 269 46.5
CiPaw.02G144900 Carya illinoinensis HOM05D007352 ORTHO05D009389 4.5e-36 156.8 269 79.2
MELO3C012722.2 Cucumis melo HOM05D007352 ORTHO05D009389 4.5e-36 156.8 267 76.4
Sp1g38610 Schrenkiella parvula HOM05D007352 ORTHO05D009389 5.9e-36 156.4 267 78.3
CANSAT35G0590 Cannabis sativa HOM05D007352 ORTHO05D009389 7.7e-36 156.0 270 78.1
BcaB02g11032 Brassica carinata HOM05D007352 ORTHO05D009389 1.3e-35 155.2 267 77.9
Eucgr.F03084 Eucalyptus grandis HOM05D007352 ORTHO05D009389 1.3e-35 155.2 268 79.5
Manes.11G031901 Manihot esculenta HOM05D007352 ORTHO05D009389 1.3e-35 155.2 270 78.5
AUR62031951 Chenopodium quinoa HOM05D007352 ORTHO05D009389 1.7e-35 154.8 270 81.1
Hund07627 Selenicereus undatus HOM05D007352 ORTHO05D009389 1.7e-35 154.8 270 80.0
SalBow1G5626 Salvia bowleyana HOM05D007352 ORTHO05D009389 2.2e-35 154.5 267 77.9
GSVIVG01016956001 Vitis vinifera HOM05D007352 ORTHO05D009389 5.0e-35 153.3 267 65.9
AT1G51965 Arabidopsis thaliana HOM05D007352 ORTHO05D009389 6.5e-35 152.9 267 79.0
BcaC08g43959 Brassica carinata HOM05D007352 ORTHO05D009389 6.5e-35 152.9 267 77.5
C06p13600 Brassica napus HOM05D007352 ORTHO05D009389 6.5e-35 152.9 267 77.5
BolC6t36524H Brassica oleracea HOM05D007352 ORTHO05D009389 6.5e-35 152.9 267 77.5
Sabra13G0090700 Salix brachista HOM05D007352 ORTHO05D009389 6.5e-35 152.9 270 75.9
Carub.0001s4090 Capsella rubella HOM05D007352 ORTHO05D009389 1.1e-34 152.1 267 77.5
CsaV3_7G026910 Cucumis sativus L. HOM05D007352 ORTHO05D009389 1.1e-34 152.1 267 77.5
QL05p019112 Quercus lobata HOM05D007352 ORTHO05D009389 1.1e-34 152.1 268 77.6
Cc06_g12800 Coffea canephora HOM05D007352 ORTHO05D009389 1.4e-34 151.8 270 77.0
Potri.013G105000 Populus trichocarpa HOM05D007352 ORTHO05D009389 1.4e-34 151.8 268 76.1
Thhalv10011294m.g Eutrema salsugineum HOM05D007352 ORTHO05D009389 1.9e-34 151.4 267 77.5
Gorai.005G152200 Gossypium raimondii HOM05D007352 ORTHO05D009389 1.9e-34 151.4 262 78.2
AL1G60010 Arabidopsis lyrata HOM05D007352 ORTHO05D009389 2.5e-34 151.0 267 77.5
Aa31LG10G2840 Aethionema arabicum HOM05D007352 ORTHO05D009389 3.2e-34 150.6 267 76.8
Cfa003634 Carpinus fangiana HOM05D007352 ORTHO05D009389 3.2e-34 150.6 260 78.5
Sed0016070 Sechium edule HOM05D007352 ORTHO05D009389 5.5e-34 149.8 269 76.2
Glyma.15G131800 Glycine max HOM05D007352 ORTHO05D009389 2.1e-33 147.9 266 76.7
RcHm_v2.0_Chr2g0141041 Rosa chinensis HOM05D007352 ORTHO05D009389 2.7e-33 147.5 269 61.3
AUR62022237 Chenopodium quinoa HOM05D007352 ORTHO05D009389 4.7e-33 146.7 270 79.3
FAN02G2393 Fragaria x ananassa HOM05D007352 ORTHO05D009389 4.7e-33 146.7 267 77.2
Os02g0226900 Oryza sativa ssp. japonica HOM05D007352 ORTHO05D009389 6.1e-33 146.4 264 75.4
Atru.BG.161.p Acer truncatum HOM05D007352 ORTHO05D009389 8.0e-33 146.0 263 76.8
Phvul.006G126800 Phaseolus vulgaris HOM05D007352 ORTHO05D009389 1.0e-32 145.6 264 75.8
FvH4_6g32590 Fragaria vesca HOM05D007352 ORTHO05D009389 1.4e-32 145.2 266 77.1
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 1.5e-31 141.7 267 74.5
Thecc.02G309100 Theobroma cacao HOM05D007352 ORTHO05D009389 7.4e-31 139.4 260 78.5
Aqoxy5G00202 Aquilegia oxysepala HOM05D007352 ORTHO05D009389 1.4e-24 118.6 84 69.0
Zm00001eb205030 Zea mays HOM05D007352 ORTHO05D009389 1.4e-24 118.6 261 74.7
Ah.01g017290 Amaranthus hybridus HOM05D007352 ORTHO05D009389 3.0e-24 117.5 348 46.6
Actinidia32110 Actinidia chinensis HOM05D007352 ORTHO05D009389 6.7e-24 116.3 85 62.4
Actinidia32109 Actinidia chinensis HOM05D000647 ORTHO05D000485 2.2e-22 111.3 67 76.1
Sc15g0001700 Simmondsia chinensis HOM05D007352 ORTHO05D009389 2.2e-22 111.3 67 77.6
SHI11130 Sapria himalayana HOM05D007352 ORTHO05D009389 2.8e-22 110.9 270 45.9
FAN05G5710 Fragaria x ananassa HOM05D007352 ORTHO05D009389 4.1e-21 107.1 67 74.6
VMungo0540G1340 Vigna mungo HOM05D007352 ORTHO05D009389 4.1e-21 107.1 67 74.6
Ah.16g103230 Amaranthus hybridus HOM05D007352 ORTHO05D009389 1.6e-20 105.1 67 71.6
Sc15g0001710 Simmondsia chinensis HOM05D007352 ORTHO05D009389 2.0e-20 104.8 80 62.5
CARHR042130 Cardamine hirsuta HOM05D007352 ORTHO05D009389 3.5e-20 104.0 67 73.1
FAN14G1294 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.3e-19 102.1 64 75.0
MD15G1412800 Malus domestica HOM05D007352 ORTHO05D009389 1.3e-19 102.1 67 74.6
FAN05G3498 Fragaria x ananassa HOM05D001329 ORTHO05D002618 7.2e-18 96.3 67 70.1
FAN09G1056 Fragaria x ananassa HOM05D007352 ORTHO05D009389 1.3e-14 85.5 81 49.4
SEGI_18978 Sequoiadendron giganteum HOM05D007352 ORTHO05D009389 4.1e-13 80.5 68 52.9
ATR0751G068 Amborella trichopoda HOM05D007352 ORTHO05D009389 1.2e-12 79.0 59 61.0
SGA_v2.0_scaffold115G32057 Striga asiatica HOM05D007352 ORTHO05D009389 2.6e-07 61.2 36 69.4


User provided reference genes

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