Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0767 Papaver somniferum HOM05D006951 ORTHO05D008594 2.3e-72 275.4 131 100.0
PSO339G4731 Papaver somniferum HOM05D006951 ORTHO05D008594 1.1e-71 273.1 131 99.2
CiPaw.09G171000 Carya illinoinensis HOM05D006951 ORTHO05D008594 1.2e-57 226.5 131 78.6
CANSAT80G0954 Cannabis sativa HOM05D006951 ORTHO05D008594 6.0e-57 224.2 130 78.5
TAR633G0596 Trochodendron aralioides HOM05D006951 ORTHO05D008594 7.8e-57 223.8 131 79.4
Atru.chr8.1776 Acer truncatum HOM05D006951 ORTHO05D008594 2.3e-56 222.2 130 78.5
Haze_20517 Corylus avellana HOM05D006951 ORTHO05D008594 3.9e-56 221.5 130 76.2
TAR369G1149 Trochodendron aralioides HOM05D006951 ORTHO05D008594 3.9e-56 221.5 131 79.4
Cfa017635 Carpinus fangiana HOM05D006951 ORTHO05D008594 5.1e-56 221.1 130 76.2
Actinidia26657 Actinidia chinensis HOM05D006951 ORTHO05D008594 6.6e-56 220.7 128 78.1
Actinidia28914 Actinidia chinensis HOM05D006951 ORTHO05D008594 1.1e-55 219.9 128 78.9
Dinv37325 Davidia involucrata HOM05D006951 ORTHO05D008594 1.1e-55 219.9 126 78.6
COL.COLO4_26935 Corchorus olitorius HOM05D006951 ORTHO05D008594 1.5e-55 219.5 131 78.6
vmacro07304 Vaccinium macrocarpon HOM05D006951 ORTHO05D008594 2.5e-55 218.8 131 75.6
Cc06_g04390 Coffea canephora HOM05D006951 ORTHO05D008594 3.3e-55 218.4 128 78.1
Thecc.05G069400 Theobroma cacao HOM05D006951 ORTHO05D008594 4.3e-55 218.0 131 76.3
Sabra06G0096900 Salix brachista HOM05D006951 ORTHO05D008594 5.6e-55 217.6 131 75.6
Cpa.g.sc456.2 Carica papaya HOM05D006951 ORTHO05D008594 7.3e-55 217.2 132 75.0
Duzib106G1710 Durio zibethinus HOM05D006951 ORTHO05D008594 7.3e-55 217.2 130 76.2
Gohir.D09G141300 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.1e-54 215.7 131 75.6
Gorai.006G162200 Gossypium raimondii HOM05D006951 ORTHO05D008594 2.1e-54 215.7 131 75.6
Glyma.19G185200 Glycine max HOM05D006951 ORTHO05D008594 2.8e-54 215.3 128 77.3
THA.LOC104816356 Tarenaya hassleriana HOM05D006951 ORTHO05D008594 2.8e-54 215.3 131 73.3
TWI74G0247 Tripterygium wilfordii HOM05D006951 ORTHO05D008594 2.8e-54 215.3 131 74.0
Aqoxy2G01713 Aquilegia oxysepala HOM05D006951 ORTHO05D008594 3.6e-54 214.9 128 78.1
Nitab4.5_0024714g0010 Nicotiana tabacum HOM05D006951 ORTHO05D008594 4.7e-54 214.5 126 78.6
Potri.006G122700 Populus trichocarpa HOM05D006951 ORTHO05D008594 8.1e-54 213.8 130 74.6
GSVIVG01033661001 Vitis vinifera HOM05D006951 ORTHO05D008594 1.1e-53 213.4 130 76.9
Nn6g35256 Nelumbo nucifera HOM05D006951 ORTHO05D008594 1.4e-53 213.0 130 76.2
Peaxi162Scf00282g00715 Petunia axillaris HOM05D006951 ORTHO05D008594 1.4e-53 213.0 128 75.8
VMungo1383G2370 Vigna mungo HOM05D006951 ORTHO05D008594 1.4e-53 213.0 128 76.6
arahy.Tifrunner.gnm1.ann1.GEWQ29 Arachis hypogaea HOM05D006951 ORTHO05D008594 1.8e-53 212.6 126 75.4
arahy.Tifrunner.gnm1.ann1.U3DP0D Arachis hypogaea HOM05D006951 ORTHO05D008594 1.8e-53 212.6 126 75.4
Solyc01g097140.4 Solanum lycopersicum HOM05D006951 ORTHO05D008594 1.8e-53 212.6 127 77.2
Sopen01g040820 Solanum pennellii HOM05D006951 ORTHO05D008594 1.8e-53 212.6 127 77.2
Gohir.A09G145200 Gossypium hirsutum HOM05D006951 ORTHO05D008594 2.3e-53 212.2 131 74.8
PGSC0003DMG400027515 Solanum tuberosum HOM05D006951 ORTHO05D008594 2.3e-53 212.2 127 77.2
Nitab4.5_0002247g0030 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.1e-53 211.8 126 77.0
CsaV3_6G040080 Cucumis sativus L. HOM05D006951 ORTHO05D008594 4.0e-53 211.5 126 74.6
Lalb_Chr25g0288931 Lupinus albus HOM05D006951 ORTHO05D008594 5.2e-53 211.1 126 75.4
ClCG04G009460 Citrullus lanatus HOM05D006951 ORTHO05D008594 6.8e-53 210.7 126 74.6
AL6G12830 Arabidopsis lyrata HOM05D006951 ORTHO05D008594 8.9e-53 210.3 131 72.5
Carub.0006s0227 Capsella rubella HOM05D006951 ORTHO05D008594 8.9e-53 210.3 131 72.5
ECA233G5925 Erigeron canadensis HOM05D006951 ORTHO05D008594 8.9e-53 210.3 127 74.8
Eucgr.A01658 Eucalyptus grandis HOM05D006951 ORTHO05D008594 8.9e-53 210.3 127 73.2
AUR62042061 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.2e-52 209.9 128 75.0
MELO3C024481.2 Cucumis melo HOM05D006951 ORTHO05D008594 1.2e-52 209.9 126 73.0
Prupe.7G127500 Prunus persica HOM05D006951 ORTHO05D008594 1.2e-52 209.9 128 71.1
AUR62026921 Chenopodium quinoa HOM05D006951 ORTHO05D008594 1.5e-52 209.5 128 75.0
Phvul.001G180100 Phaseolus vulgaris HOM05D006951 ORTHO05D008594 2.0e-52 209.1 128 73.4
Ca_08913_v3 Cicer arietinum L. HOM05D006951 ORTHO05D008594 2.6e-52 208.8 124 76.6
Hma1.2p1_0828F.1_g225170 Hydrangea macrophylla HOM05D006951 ORTHO05D008594 2.6e-52 208.8 132 75.8
EL10Ac7g16659 Beta vulgaris HOM05D006951 ORTHO05D008594 3.4e-52 208.4 128 74.2
Medtr7g102310 Medicago truncatula HOM05D006951 ORTHO05D008594 3.4e-52 208.4 127 74.0
MBI07_g19430_MAGBIO Magnolia biondii HOM05D006951 ORTHO05D008594 4.4e-52 208.0 123 76.4
RcHm_v2.0_Chr3g0470511 Rosa chinensis HOM05D006951 ORTHO05D008594 4.4e-52 208.0 129 73.6
CARHR209870 Cardamine hirsuta HOM05D006951 ORTHO05D008594 5.8e-52 207.6 131 71.8
Manes.16G055400 Manihot esculenta HOM05D006951 ORTHO05D008594 5.8e-52 207.6 128 72.7
Lj1g0019165 Lotus japonicus HOM05D006951 ORTHO05D008594 7.6e-52 207.2 126 74.6
Thhalv10014956m.g Eutrema salsugineum HOM05D006951 ORTHO05D008594 9.9e-52 206.8 131 70.2
QL07p042869 Quercus lobata HOM05D006951 ORTHO05D008594 9.9e-52 206.8 166 60.8
Sp6g39280 Schrenkiella parvula HOM05D006951 ORTHO05D008594 9.9e-52 206.8 131 70.2
FAN05G0469 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.3e-51 206.5 129 73.6
FAN05G0824 Fragaria x ananassa HOM05D006951 ORTHO05D008594 1.3e-51 206.5 129 73.6
Psat3g041600 Pisum sativum HOM05D006951 ORTHO05D008594 1.3e-51 206.5 126 73.8
CAN.G134.74 Capsicum annuum HOM05D006951 ORTHO05D008594 2.9e-51 205.3 127 74.0
Nitab4.5_0009274g0040 Nicotiana tabacum HOM05D006951 ORTHO05D008594 3.7e-51 204.9 121 78.5
FAN14G1959 Fragaria x ananassa HOM05D006951 ORTHO05D008594 4.9e-51 204.5 129 72.9
Aa31LG1G21700 Aethionema arabicum HOM05D006951 ORTHO05D008594 6.4e-51 204.1 128 70.3
MSTRG.10329 Avicennia marina HOM05D006951 ORTHO05D008594 6.4e-51 204.1 128 71.9
MD12G1109000 Malus domestica HOM05D006951 ORTHO05D008594 6.4e-51 204.1 128 70.3
Ciclev10013072m.g Citrus clementina HOM05D006951 ORTHO05D008594 8.4e-51 203.8 124 72.6
FAN02G4365 Fragaria x ananassa HOM05D006951 ORTHO05D008594 8.4e-51 203.8 129 72.9
BcaB01g05838 Brassica carinata HOM05D006951 ORTHO05D008594 1.9e-50 202.6 127 69.3
A03p01180 Brassica napus HOM05D006951 ORTHO05D008594 1.9e-50 202.6 127 69.3
C03p01520 Brassica napus HOM05D006951 ORTHO05D008594 1.9e-50 202.6 127 69.3
BolC3t12706H Brassica oleracea HOM05D006951 ORTHO05D008594 1.9e-50 202.6 127 69.3
BraA03t09500Z Brassica rapa HOM05D006951 ORTHO05D008594 1.9e-50 202.6 127 69.3
BcaB01g05820 Brassica carinata HOM05D006951 ORTHO05D008594 5.4e-50 201.1 127 68.5
DCAR_017669 Daucus carota HOM05D006951 ORTHO05D008594 5.4e-50 201.1 130 67.7
FvH4_6g16580 Fragaria vesca HOM05D006951 ORTHO05D008594 5.4e-50 201.1 129 72.1
SalBow5G4485 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.2e-49 199.9 128 70.3
Sed0009232 Sechium edule HOM05D006951 ORTHO05D008594 2.1e-49 199.1 127 71.7
PGR004G1868 Punica granatum HOM05D006951 ORTHO05D008594 1.0e-48 196.8 127 69.3
SalBow5G4376 Salvia bowleyana HOM05D006951 ORTHO05D008594 1.3e-48 196.4 128 69.5
HanXRQChr13g0400861 Helianthus annuus HOM05D006951 ORTHO05D008594 3.0e-48 195.3 129 69.0
HanXRQChr02g0051701 Helianthus annuus HOM05D006951 ORTHO05D008594 6.6e-48 194.1 129 69.0
Migut.L01713 Erythranthe guttata HOM05D006951 ORTHO05D008594 1.5e-47 193.0 129 68.2
SGA_v2.0_scaffold35G14116 Striga asiatica HOM05D006951 ORTHO05D008594 9.6e-47 190.3 128 64.8
CDE08G0062 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 2.4e-45 185.7 126 65.1
Zm00001eb394010 Zea mays HOM05D006951 ORTHO05D008594 1.5e-44 183.0 128 64.1
Os03g0108000 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 3.4e-44 181.8 127 62.2
Sc20g0005620 Simmondsia chinensis HOM05D006951 ORTHO05D008594 4.4e-44 181.4 113 74.3
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 5.8e-44 181.0 131 63.4
ATR0723G063 Amborella trichopoda HOM05D006951 ORTHO05D008594 3.8e-43 178.3 125 64.0
CDE02G4226 Ceratophyllum demersum HOM05D006951 ORTHO05D008594 3.8e-43 178.3 126 65.9
Lsat_1_v5_gn_6_24461 Lactuca sativa HOM05D006951 ORTHO05D008594 7.1e-42 174.1 113 70.8
unitig_8.g4717 Utricularia gibba HOM05D006951 ORTHO05D008594 8.1e-38 160.6 116 60.3
Dinv35800 Davidia involucrata HOM05D006951 ORTHO05D008594 2.6e-36 155.6 110 71.8
SEGI_23238 Sequoiadendron giganteum HOM05D006951 ORTHO05D008594 7.6e-36 154.1 125 53.6
Pp3c1_27510 Physcomitrium patens HOM05D006951 ORTHO05D008594 4.2e-34 148.3 125 52.0
AagrBONN_evm.TU.Sc2ySwM_368.1351 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.5e-31 139.8 129 49.6
AagrBONN_evm.TU.Sc2ySwM_340.899 Anthoceros agrestis HOM05D006951 ORTHO05D008594 1.9e-31 139.4 129 49.6
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.5e-31 139.0 157 49.7
Mapoly0029s0104 Marchantia polymorpha HOM05D006951 ORTHO05D008594 1.6e-30 136.3 107 58.9
CSS0013835 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 9.3e-26 120.6 80 70.0
SMO118G0389 Selaginella moellendorffii HOM05D006951 ORTHO05D008594 9.3e-26 120.6 119 47.9
TPR.G32820 Trifolium pratense HOM05D006951 ORTHO05D008594 1.8e-24 116.3 81 67.9
AT5G03455 Arabidopsis thaliana HOM05D006951 ORTHO05D008594 2.1e-22 109.4 75 68.0
CSS0008283 Camellia sinensis var. sinensis HOM05D006951 ORTHO05D008594 3.1e-21 105.5 57 78.9
BcaC06g32064 Brassica carinata HOM05D006951 ORTHO05D008594 1.7e-19 99.8 57 73.7
TPR.G15158 Trifolium pratense HOM05D006951 ORTHO05D008594 3.8e-19 98.6 52 78.8
Atru.chr8.1773 Acer truncatum HOM05D006951 ORTHO05D008594 8.4e-19 97.4 57 71.9
Os10g0545700 Oryza sativa ssp. japonica HOM05D006951 ORTHO05D008594 8.4e-19 97.4 54 74.1
PGR004G2181 Punica granatum HOM05D006951 ORTHO05D008594 4.8e-14 81.6 68 55.9
Hund00749 Selenicereus undatus HOM05D004066 ORTHO05D004434 6.1e-09 64.7 43 65.1
Hund14405 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.9e-09 64.3 43 65.1


User provided reference genes

Program Settings