Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO801G0186 Papaver somniferum HOM05D005854 ORTHO05D007175 2.9e-132 475.3 254 100.0
PSO339G2746 Papaver somniferum HOM05D005854 ORTHO05D007175 5.1e-129 464.5 255 98.4
Nn2g15034 Nelumbo nucifera HOM05D005854 ORTHO05D007175 8.8e-89 330.9 251 72.1
TAR383G0748 Trochodendron aralioides HOM05D005854 ORTHO05D007175 4.8e-87 325.1 251 71.3
Aqoxy5G03507 Aquilegia oxysepala HOM05D005854 ORTHO05D007175 7.2e-83 311.2 253 69.2
vmacro13205 Vaccinium macrocarpon HOM05D005854 ORTHO05D007175 1.5e-80 303.5 251 69.7
PGR031G0642 Punica granatum HOM05D005854 ORTHO05D007175 2.7e-77 292.7 250 67.2
CANSAT54G0206 Cannabis sativa HOM05D005854 ORTHO05D007175 3.5e-77 292.4 247 67.2
Sc26g0000750 Simmondsia chinensis HOM05D005854 ORTHO05D007175 4.5e-77 292.0 241 66.8
Cpa.g.sc10.16 Carica papaya HOM05D005854 ORTHO05D007175 6.5e-76 288.1 241 68.0
ATR0594G138 Amborella trichopoda HOM05D005854 ORTHO05D007175 8.5e-76 287.7 251 67.3
Lj9P593T21 Lonicera japonica HOM05D005854 ORTHO05D007175 8.5e-76 287.7 251 66.5
RcHm_v2.0_Chr3g0451741 Rosa chinensis HOM05D005854 ORTHO05D007175 1.9e-75 286.6 249 65.5
TWI53G0615 Tripterygium wilfordii HOM05D005854 ORTHO05D007175 2.5e-75 286.2 252 67.1
CSS0045126 Camellia sinensis var. sinensis HOM05D005854 ORTHO05D007175 5.5e-75 285.0 240 66.2
Hund23260 Selenicereus undatus HOM05D005854 ORTHO05D007175 5.5e-75 285.0 243 65.8
Thecc.01G121600 Theobroma cacao HOM05D005854 ORTHO05D007175 5.5e-75 285.0 247 66.4
Gohir.A02G138400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 9.4e-75 284.3 241 67.2
Gorai.003G050300 Gossypium raimondii HOM05D005854 ORTHO05D007175 1.6e-74 283.5 241 67.2
Haze_15607 Corylus avellana HOM05D005854 ORTHO05D007175 3.6e-74 282.3 256 66.0
FvH4_6g03270 Fragaria vesca HOM05D005854 ORTHO05D007175 3.6e-74 282.3 249 64.7
Gohir.D03G049000 Gossypium hirsutum HOM05D005854 ORTHO05D007175 8.0e-74 281.2 241 66.4
Ah.05g179960 Amaranthus hybridus HOM05D005854 ORTHO05D007175 1.8e-73 280.0 243 63.4
MD04G1222200 Malus domestica HOM05D005854 ORTHO05D007175 2.3e-73 279.6 249 65.1
AUR62004438 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.0e-73 279.3 244 64.3
AUR62023510 Chenopodium quinoa HOM05D005854 ORTHO05D007175 3.0e-73 279.3 244 64.3
FAN05G3773 Fragaria x ananassa HOM05D005854 ORTHO05D007175 3.0e-73 279.3 244 64.8
EL10Ac1g00324 Beta vulgaris HOM05D005854 ORTHO05D007175 5.2e-73 278.5 234 66.7
Duzib147G0085 Durio zibethinus HOM05D005854 ORTHO05D007175 6.8e-73 278.1 255 62.7
Haze_23551 Corylus avellana HOM05D005854 ORTHO05D007175 8.8e-73 277.7 256 64.8
Gohir.A03G042400 Gossypium hirsutum HOM05D005854 ORTHO05D007175 1.5e-72 276.9 247 64.0
Psat4g213880 Pisum sativum HOM05D005854 ORTHO05D007175 1.5e-72 276.9 251 62.5
QL04p059766 Quercus lobata HOM05D005854 ORTHO05D007175 1.5e-72 276.9 252 64.3
Lalb_Chr10g0100131 Lupinus albus HOM05D005854 ORTHO05D007175 3.4e-72 275.8 251 62.5
Oeu063662.1 Olea europaea HOM05D005854 ORTHO05D007175 3.4e-72 275.8 251 61.8
Lsat_1_v5_gn_7_1520 Lactuca sativa HOM05D005854 ORTHO05D007175 4.4e-72 275.4 255 61.2
MSTRG.17312 Avicennia marina HOM05D005854 ORTHO05D007175 7.5e-72 274.6 240 65.0
HPP92_025111 Vanilla planifolia HOM05D005854 ORTHO05D007175 1.3e-71 273.9 232 66.8
CiPaw.02G037800 Carya illinoinensis HOM05D005854 ORTHO05D007175 1.7e-71 273.5 244 65.6
Ciclev10016474m.g Citrus clementina HOM05D005854 ORTHO05D007175 1.7e-71 273.5 245 62.9
Cfa006467 Carpinus fangiana HOM05D005854 ORTHO05D007175 2.2e-71 273.1 256 64.1
Cc02_g38850 Coffea canephora HOM05D005854 ORTHO05D007175 2.2e-71 273.1 242 64.9
Hma1.2p1_0397F.1_g143770 Hydrangea macrophylla HOM05D005854 ORTHO05D007175 2.2e-71 273.1 248 64.1
Glyma.07G060800 Glycine max HOM05D005854 ORTHO05D007175 3.7e-71 272.3 231 64.9
COL.COLO4_22426 Corchorus olitorius HOM05D005854 ORTHO05D007175 6.3e-71 271.6 238 65.5
Duzib187G0164 Durio zibethinus HOM05D005854 ORTHO05D007175 8.3e-71 271.2 240 65.4
VMungo0331G0610 Vigna mungo HOM05D005854 ORTHO05D007175 1.1e-70 270.8 234 63.2
Ca_25392_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 1.4e-70 270.4 251 62.5
Actinidia10096 Actinidia chinensis HOM05D005854 ORTHO05D007175 3.1e-70 269.2 242 64.0
CsaV3_3G008340 Cucumis sativus L. HOM05D005854 ORTHO05D007175 4.1e-70 268.9 244 62.7
Manes.06G055200 Manihot esculenta HOM05D005854 ORTHO05D007175 7.0e-70 268.1 242 63.2
arahy.Tifrunner.gnm1.ann1.788ENG Arachis hypogaea HOM05D005854 ORTHO05D007175 1.6e-69 266.9 251 61.0
arahy.Tifrunner.gnm1.ann1.GVN9XJ Arachis hypogaea HOM05D005854 ORTHO05D007175 2.0e-69 266.5 251 61.0
TPR.G21281 Trifolium pratense HOM05D005854 ORTHO05D007175 2.0e-69 266.5 251 62.5
Phvul.010G108400 Phaseolus vulgaris HOM05D005854 ORTHO05D007175 2.7e-69 266.2 233 63.1
Lj3g0026359 Lotus japonicus HOM05D005854 ORTHO05D007175 3.5e-69 265.8 253 60.9
SalBow5G1869 Salvia bowleyana HOM05D005854 ORTHO05D007175 4.5e-69 265.4 254 59.8
SalBow6G6433 Salvia bowleyana HOM05D005854 ORTHO05D007175 5.9e-69 265.0 254 59.8
Sed0001947 Sechium edule HOM05D005854 ORTHO05D007175 1.0e-68 264.2 249 62.7
HanXRQChr04g0120611 Helianthus annuus HOM05D005854 ORTHO05D007175 1.7e-68 263.5 256 59.8
DCAR_020830 Daucus carota HOM05D005854 ORTHO05D007175 2.9e-68 262.7 254 58.7
Atru.chr10.871 Acer truncatum HOM05D005854 ORTHO05D007175 5.0e-68 261.9 257 60.3
Migut.B01823 Erythranthe guttata HOM05D005854 ORTHO05D007175 1.1e-67 260.8 252 61.9
Sopen01g039170 Solanum pennellii HOM05D005854 ORTHO05D007175 7.2e-67 258.1 254 57.9
Nitab4.5_0004613g0050 Nicotiana tabacum HOM05D005854 ORTHO05D007175 1.6e-66 256.9 242 60.7
Nitab4.5_0000305g0260 Nicotiana tabacum HOM05D005854 ORTHO05D007175 2.1e-66 256.5 243 60.1
CAN.G78.154 Capsicum annuum HOM05D005854 ORTHO05D007175 3.6e-66 255.8 244 60.2
Glyma.16G029400 Glycine max HOM05D005854 ORTHO05D007175 8.0e-66 254.6 225 63.6
Solyc01g095420.3 Solanum lycopersicum HOM05D005854 ORTHO05D007175 8.0e-66 254.6 251 57.8
MBI04_g37933_MAGBIO Magnolia biondii HOM05D005854 ORTHO05D007175 1.0e-65 254.2 252 60.3
Ca_23562_v3 Cicer arietinum L. HOM05D005854 ORTHO05D007175 2.3e-65 253.1 251 58.6
Medtr8g023960 Medicago truncatula HOM05D005854 ORTHO05D007175 3.0e-65 252.7 251 61.0
Gorai.003G131400 Gossypium raimondii HOM05D005854 ORTHO05D007175 6.8e-65 251.5 237 60.3
Zm00001eb249970 Zea mays HOM05D005854 ORTHO05D007175 2.6e-64 249.6 237 62.0
Peaxi162Scf01012g00238 Petunia axillaris HOM05D005854 ORTHO05D007175 3.4e-64 249.2 233 60.5
Potri.011G098000 Populus trichocarpa HOM05D005854 ORTHO05D007175 3.4e-64 249.2 238 59.7
PGSC0003DMG400000203 Solanum tuberosum HOM05D005854 ORTHO05D007175 5.7e-64 248.4 237 59.1
SGA_v2.0_scaffold11G05711 Striga asiatica HOM05D005854 ORTHO05D007175 5.7e-64 248.4 233 61.4
MELO3C006052.2 Cucumis melo HOM05D005854 ORTHO05D007175 3.7e-63 245.7 244 59.4
Sabra11G0084900 Salix brachista HOM05D005854 ORTHO05D007175 1.1e-62 244.2 238 59.2
Sabra11G0091100 Salix brachista HOM05D005854 ORTHO05D007175 1.1e-62 244.2 238 59.2
FAN09G2134 Fragaria x ananassa HOM05D005854 ORTHO05D007175 1.8e-62 243.4 249 57.8
Aa31LG9G9180 Aethionema arabicum HOM05D005854 ORTHO05D007175 2.4e-62 243.0 232 58.6
AT4G05400 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 4.1e-62 242.3 243 57.2
CARHR252180 Cardamine hirsuta HOM05D005854 ORTHO05D007175 1.6e-61 240.4 246 56.5
Os01g0511200 Oryza sativa ssp. japonica HOM05D005854 ORTHO05D007175 4.5e-61 238.8 245 57.6
Thhalv10026066m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 1.7e-60 236.9 254 56.3
Rhsim07G0008000 Rhododendron simsii HOM05D005854 ORTHO05D007175 2.3e-60 236.5 248 57.3
Carub.0006s3331 Capsella rubella HOM05D005854 ORTHO05D007175 6.6e-60 235.0 243 56.0
AL6G48990 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.1e-59 234.2 245 55.9
Carub.0007s2029 Capsella rubella HOM05D005854 ORTHO05D007175 1.5e-59 233.8 256 55.5
ECA236G4309 Erigeron canadensis HOM05D005854 ORTHO05D007175 4.3e-59 232.3 235 59.6
A09p25360 Brassica napus HOM05D005854 ORTHO05D007175 9.5e-59 231.1 259 53.3
BraA09t38118Z Brassica rapa HOM05D005854 ORTHO05D007175 1.2e-58 230.7 260 53.1
AL7G32980 Arabidopsis lyrata HOM05D005854 ORTHO05D007175 1.6e-58 230.3 254 54.7
Sp6g03690 Schrenkiella parvula HOM05D005854 ORTHO05D007175 3.6e-58 229.2 250 54.0
Thhalv10028903m.g Eutrema salsugineum HOM05D005854 ORTHO05D007175 4.7e-58 228.8 246 54.5
unitig_26.g8933 Utricularia gibba HOM05D005854 ORTHO05D007175 6.1e-58 228.4 240 55.8
C09p32360 Brassica napus HOM05D005854 ORTHO05D007175 1.8e-57 226.9 254 52.8
BolC9t56081H Brassica oleracea HOM05D005854 ORTHO05D007175 1.8e-57 226.9 254 52.8
Gohir.D03G125200 Gossypium hirsutum HOM05D005854 ORTHO05D007175 2.3e-57 226.5 175 68.6
AT4G21140 Arabidopsis thaliana HOM05D005854 ORTHO05D007175 3.7e-55 219.2 246 52.4
BcaB01g01902 Brassica carinata HOM05D005854 ORTHO05D007175 5.9e-53 211.8 263 49.8
CARHR227720 Cardamine hirsuta HOM05D005854 ORTHO05D007175 1.9e-51 206.8 247 49.8
BraA01t01194Z Brassica rapa HOM05D005854 ORTHO05D007175 1.4e-49 200.7 257 49.0
Cfa005769 Carpinus fangiana HOM05D005854 ORTHO05D007175 1.2e-48 197.6 198 61.6
A01p12480 Brassica napus HOM05D005854 ORTHO05D007175 1.5e-48 197.2 251 47.0
Dinv32544 Davidia involucrata HOM05D005854 ORTHO05D007175 7.5e-48 194.9 195 59.5
C01p15070 Brassica napus HOM05D005854 ORTHO05D007175 9.8e-48 194.5 250 48.0
BcaC09g51255 Brassica carinata HOM05D005854 ORTHO05D007175 3.7e-47 192.6 250 47.6
BolC1t01456H Brassica oleracea HOM05D005854 ORTHO05D007175 3.7e-47 192.6 250 47.6
Prupe.6G341300 Prunus persica HOM05D005854 ORTHO05D007175 1.2e-45 187.6 117 81.2
BcaNung03840 Brassica carinata HOM05D005854 ORTHO05D007175 1.6e-45 187.2 252 45.2
Oeu007833.1 Olea europaea HOM05D005854 ORTHO05D007175 4.7e-42 175.6 173 59.0
Sp7g19220 Schrenkiella parvula HOM05D005854 ORTHO05D007175 6.2e-34 148.7 116 62.1
CDE04G0249 Ceratophyllum demersum HOM05D005854 ORTHO05D007175 7.6e-32 141.7 153 57.5
Actinidia20188 Actinidia chinensis HOM05D005854 ORTHO05D007175 1.6e-29 134.0 251 41.4
MD12G1238400 Malus domestica HOM05D005854 ORTHO05D007175 2.7e-29 133.3 117 61.5
Pp3c17_23470 Physcomitrium patens HOM05D005854 ORTHO05D007175 2.1e-26 123.6 228 37.7
AagrBONN_evm.TU.Sc2ySwM_362.2286 Anthoceros agrestis HOM05D005854 ORTHO05D007175 2.8e-26 123.2 180 43.3
TAR369G1106 Trochodendron aralioides HOM05D005854 ORTHO05D007175 4.9e-23 112.5 75 73.3
Lsat_1_v5_gn_3_52500 Lactuca sativa HOM05D005854 ORTHO05D007175 1.6e-21 107.5 79 74.7
Mapoly0007s0267 Marchantia polymorpha HOM05D005854 ORTHO05D007175 1.7e-20 104.0 153 45.8
Cc00_g15140 Coffea canephora HOM05D005854 ORTHO05D007175 2.3e-20 103.6 135 49.6
CBR_g40874 Chara braunii HOM05D005854 ORTHO05D007175 2.8e-18 96.7 87 57.5
Nn3g18457 Nelumbo nucifera HOM05D005854 ORTHO05D007175 9.0e-17 91.7 89 60.7
FvH4_6g03230 Fragaria vesca HOM05D005854 ORTHO05D007175 3.2e-14 83.2 100 53.0
FvH4_6g03240 Fragaria vesca HOM05D005854 ORTHO05D007175 2.5e-11 73.6 61 62.3
Lsat_1_v5_gn_4_144561 Lactuca sativa HOM05D005854 ORTHO05D007175 4.3e-11 72.8 118 44.1
RcHm_v2.0_Chr3g0451651 Rosa chinensis HOM05D005854 ORTHO05D007175 2.6e-08 63.5 54 66.7
Lsat_1_v5_gn_3_52480 Lactuca sativa HOM05D005854 ORTHO05D007175 8.4e-07 58.5 72 50.0


User provided reference genes

Program Settings