Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G4737 Papaver somniferum HOM05D004390 ORTHO05D004950 4.0e-47 191.0 94 100.0
PSO063G2970 Papaver somniferum HOM05D004390 ORTHO05D004950 1.7e-45 185.7 94 96.8
TAR371G0820 Trochodendron aralioides HOM05D004390 ORTHO05D004950 7.6e-30 133.7 94 64.9
Nn3g16498 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.7e-29 132.5 89 66.3
TAR622G0138 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.7e-29 132.5 94 67.0
Duzib251G0716 Durio zibethinus HOM05D004390 ORTHO05D004950 4.9e-29 131.0 94 63.8
Duzib248G1577 Durio zibethinus HOM05D004390 ORTHO05D004950 1.1e-28 129.8 94 62.8
Actinidia09657 Actinidia chinensis HOM05D004390 ORTHO05D004950 1.9e-28 129.0 94 67.0
Nn4g22350 Nelumbo nucifera HOM05D004390 ORTHO05D004950 1.9e-28 129.0 94 62.8
Actinidia20702 Actinidia chinensis HOM05D004390 ORTHO05D004950 2.5e-28 128.6 94 67.0
GSVIVG01010448001 Vitis vinifera HOM05D004390 ORTHO05D004950 3.2e-28 128.3 89 64.0
Aqoxy5G03398 Aquilegia oxysepala HOM05D004390 ORTHO05D004950 9.3e-28 126.7 95 60.0
Atru.chr11.2308 Acer truncatum HOM05D004390 ORTHO05D004950 1.6e-27 125.9 94 63.8
TAR629G1658 Trochodendron aralioides HOM05D004390 ORTHO05D004950 1.6e-27 125.9 89 61.8
CiPaw.06G101400 Carya illinoinensis HOM05D004390 ORTHO05D004950 2.1e-27 125.6 86 64.0
ECA233G0624 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.7e-27 125.2 92 63.0
ECA240G0924 Erigeron canadensis HOM05D004390 ORTHO05D004950 2.7e-27 125.2 92 63.0
Gohir.D01G154700 Gossypium hirsutum HOM05D004390 ORTHO05D004950 2.7e-27 125.2 94 62.8
Gorai.002G191500 Gossypium raimondii HOM05D004390 ORTHO05D004950 2.7e-27 125.2 94 62.8
MBI11_g07456_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 3.5e-27 124.8 86 62.8
Prupe.1G228300 Prunus persica HOM05D004390 ORTHO05D004950 3.5e-27 124.8 92 63.0
FvH4_4g23930 Fragaria vesca HOM05D004390 ORTHO05D004950 4.6e-27 124.4 79 68.4
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 4.6e-27 124.4 79 68.4
THA.LOC104824895 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 4.6e-27 124.4 86 62.8
BcaNung00935 Brassica carinata HOM05D004390 ORTHO05D004950 6.0e-27 124.0 94 62.8
FAN07G0791 Fragaria x ananassa HOM05D004390 ORTHO05D004950 6.0e-27 124.0 79 67.1
FAN17G1207 Fragaria x ananassa HOM05D004390 ORTHO05D004950 6.0e-27 124.0 79 67.1
FAN22G0688 Fragaria x ananassa HOM05D004390 ORTHO05D004950 6.0e-27 124.0 79 67.1
Gohir.A01G155400 Gossypium hirsutum HOM05D004390 ORTHO05D004950 6.0e-27 124.0 94 62.8
Glyma.18G007600 Glycine max HOM05D004390 ORTHO05D004950 7.9e-27 123.6 94 58.5
Gohir.A12G148600 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.0e-26 123.2 86 62.8
Lsat_1_v5_gn_8_149361 Lactuca sativa HOM05D004390 ORTHO05D004950 1.3e-26 122.9 92 62.0
Lj7E465T0 Lonicera japonica HOM05D004390 ORTHO05D004950 1.3e-26 122.9 94 60.6
Phvul.001G260900 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 1.3e-26 122.9 94 58.5
CSS0004094 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.8e-26 122.5 94 61.7
CSS0048605 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 1.8e-26 122.5 94 61.7
CANSAT80G1060 Cannabis sativa HOM05D004390 ORTHO05D004950 1.8e-26 122.5 92 60.9
Ca_18042_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 1.8e-26 122.5 94 59.6
THA.LOC104824898 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 1.8e-26 122.5 86 61.6
Gorai.008G164900 Gossypium raimondii HOM05D004390 ORTHO05D004950 2.3e-26 122.1 90 61.1
THA.LOC104824892 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.3e-26 122.1 94 61.7
THA.LOC104824896 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.3e-26 122.1 94 61.7
TWI18G1082 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 2.3e-26 122.1 94 62.8
A01p00960 Brassica napus HOM05D004390 ORTHO05D004950 3.0e-26 121.7 94 60.6
BraA01t00094Z Brassica rapa HOM05D004390 ORTHO05D004950 3.0e-26 121.7 94 60.6
THA.LOC104824890 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 3.0e-26 121.7 86 60.5
Sp7g35820 Schrenkiella parvula HOM05D004390 ORTHO05D004950 3.9e-26 121.3 86 59.3
Cpa.g.sc34.218 Carica papaya HOM05D004390 ORTHO05D004950 5.1e-26 120.9 90 63.3
Actinidia08077 Actinidia chinensis HOM05D001171 ORTHO05D001872 6.7e-26 120.6 91 61.5
BolC1t00106H Brassica oleracea HOM05D004390 ORTHO05D004950 6.7e-26 120.6 94 60.6
Cfa009329 Carpinus fangiana HOM05D004390 ORTHO05D004950 6.7e-26 120.6 90 58.9
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 6.7e-26 120.6 95 58.9
Dinv14827 Davidia involucrata HOM05D001171 ORTHO05D001872 6.7e-26 120.6 91 61.5
Glyma.08G103600 Glycine max HOM05D004390 ORTHO05D004950 6.7e-26 120.6 94 58.5
MELO3C011874.2 Cucumis melo HOM05D004390 ORTHO05D004950 8.7e-26 120.2 92 62.0
Thhalv10027263m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 8.7e-26 120.2 94 58.5
Thecc.02G210700 Theobroma cacao HOM05D004390 ORTHO05D004950 8.7e-26 120.2 94 59.6
Haze_10374 Corylus avellana HOM05D004390 ORTHO05D004950 1.1e-25 119.8 94 58.5
Gohir.D12G152500 Gossypium hirsutum HOM05D004390 ORTHO05D004950 1.1e-25 119.8 90 60.0
QL03p053718 Quercus lobata HOM05D004390 ORTHO05D004950 1.1e-25 119.8 92 60.9
Medtr8g080380 Medicago truncatula HOM05D004390 ORTHO05D004950 1.9e-25 119.0 94 56.4
Psat4g014960 Pisum sativum HOM05D004390 ORTHO05D004950 1.9e-25 119.0 94 59.6
Rhsim10G0039200 Rhododendron simsii HOM05D004390 ORTHO05D004950 1.9e-25 119.0 92 59.8
TWI75G0215 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 1.9e-25 119.0 94 60.6
Aa31LG7G14400 Aethionema arabicum HOM05D004390 ORTHO05D004950 2.5e-25 118.6 94 59.6
AL7G12360 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 2.5e-25 118.6 91 58.2
arahy.Tifrunner.gnm1.ann1.L53BL2 Arachis hypogaea HOM05D004390 ORTHO05D004950 2.5e-25 118.6 94 57.4
Hma1.2p1_0065F.1_g035640 Hydrangea macrophylla HOM05D004390 ORTHO05D004950 2.5e-25 118.6 91 61.5
MBI13_g26147_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 2.5e-25 118.6 88 58.0
Nitab4.5_0000367g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 2.5e-25 118.6 91 60.4
Psat5g095200 Pisum sativum HOM05D004390 ORTHO05D004950 2.5e-25 118.6 92 59.8
THA.LOC109116235 Tarenaya hassleriana HOM05D004390 ORTHO05D004950 2.5e-25 118.6 79 64.6
Aa31LG7G15420 Aethionema arabicum HOM05D004390 ORTHO05D004950 3.3e-25 118.2 94 58.5
arahy.Tifrunner.gnm1.ann1.FA6GLZ Arachis hypogaea HOM05D004390 ORTHO05D004950 3.3e-25 118.2 94 57.4
Cc11_g00910 Coffea canephora HOM05D004390 ORTHO05D004950 3.3e-25 118.2 91 60.4
HanXRQChr08g0207731 Helianthus annuus HOM05D004390 ORTHO05D004950 3.3e-25 118.2 91 59.3
arahy.Tifrunner.gnm1.ann1.CM82MG Arachis hypogaea HOM05D004390 ORTHO05D004950 4.3e-25 117.9 94 57.4
Manes.12G012800 Manihot esculenta HOM05D004390 ORTHO05D004950 4.3e-25 117.9 95 62.1
Sc11g0000500 Simmondsia chinensis HOM05D004390 ORTHO05D004950 4.3e-25 117.9 92 55.4
Nitab4.5_0000379g0030 Nicotiana tabacum HOM05D004390 ORTHO05D004950 5.6e-25 117.5 91 59.3
SpUn0131_0010 Schrenkiella parvula HOM05D004390 ORTHO05D004950 5.6e-25 117.5 91 59.3
TWI36G1003 Tripterygium wilfordii HOM05D004390 ORTHO05D004950 5.6e-25 117.5 94 60.6
Glyma.11G249600 Glycine max HOM05D004390 ORTHO05D004950 7.4e-25 117.1 94 54.3
MBI05_g44034_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 7.4e-25 117.1 86 59.3
PSO478G0183 Papaver somniferum HOM05D004390 ORTHO05D004950 7.4e-25 117.1 94 59.6
COL.COLO4_20382 Corchorus olitorius HOM05D001171 ORTHO05D001872 9.6e-25 116.7 91 60.4
Eucgr.B03484 Eucalyptus grandis HOM05D004390 ORTHO05D004950 9.6e-25 116.7 96 59.4
Glyma.05G146700 Glycine max HOM05D004390 ORTHO05D004950 9.6e-25 116.7 94 57.4
PSO017G1102 Papaver somniferum HOM05D004390 ORTHO05D004950 9.6e-25 116.7 95 58.9
TPR.G28271 Trifolium pratense HOM05D004390 ORTHO05D004950 9.6e-25 116.7 94 56.4
Carub.0007s0202 Capsella rubella HOM05D004390 ORTHO05D004950 1.3e-24 116.3 95 58.9
Cc09_g06290 Coffea canephora HOM05D015856 ORTHO05D004950 1.3e-24 116.3 91 61.5
PGR102G2095 Punica granatum HOM05D004390 ORTHO05D004950 1.3e-24 116.3 97 56.7
CARHR113610 Cardamine hirsuta HOM05D004390 ORTHO05D004950 1.6e-24 115.9 86 57.0
ClCG11G013760 Citrullus lanatus HOM05D004390 ORTHO05D004950 1.6e-24 115.9 93 58.1
CsaV3_5G030350 Cucumis sativus L. HOM05D004390 ORTHO05D004950 1.6e-24 115.9 92 58.7
Lj4g0026719 Lotus japonicus HOM05D004390 ORTHO05D004950 2.8e-24 115.2 92 58.7
Sed0024223 Sechium edule HOM05D004390 ORTHO05D004950 2.8e-24 115.2 92 58.7
AT2G22425 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 3.7e-24 114.8 91 57.1
AL4G11930 Arabidopsis lyrata HOM05D004390 ORTHO05D004950 4.8e-24 114.4 91 57.1
Medtr3g085510 Medicago truncatula HOM05D004390 ORTHO05D004950 4.8e-24 114.4 96 56.2
AT4G40042 Arabidopsis thaliana HOM05D004390 ORTHO05D004950 6.2e-24 114.0 82 58.5
CARHR246620 Cardamine hirsuta HOM05D004390 ORTHO05D004950 6.2e-24 114.0 92 56.5
Phvul.002G174400 Phaseolus vulgaris HOM05D004390 ORTHO05D004950 6.2e-24 114.0 94 57.4
QL12p006243 Quercus lobata HOM05D004390 ORTHO05D004950 6.2e-24 114.0 93 55.9
Migut.E00025 Erythranthe guttata HOM05D004390 ORTHO05D004950 8.2e-24 113.6 94 57.4
Nitab4.5_0002210g0100 Nicotiana tabacum HOM05D004390 ORTHO05D004950 1.1e-23 113.2 91 57.1
Carub.0004s0159 Capsella rubella HOM05D004390 ORTHO05D004950 1.8e-23 112.5 86 55.8
CSS0024228 Camellia sinensis var. sinensis HOM05D004390 ORTHO05D004950 2.4e-23 112.1 91 58.2
Thhalv10000378m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 2.4e-23 112.1 91 57.1
Sabra08G0134000 Salix brachista HOM05D004390 ORTHO05D004950 2.4e-23 112.1 95 55.8
Hund25458 Selenicereus undatus HOM05D004390 ORTHO05D004950 2.4e-23 112.1 93 57.0
Duzib268G0993 Durio zibethinus HOM05D004390 ORTHO05D004950 3.1e-23 111.7 90 56.7
Migut.K00715 Erythranthe guttata HOM05D004390 ORTHO05D004950 3.1e-23 111.7 92 56.5
Thhalv10021836m.g Eutrema salsugineum HOM05D004390 ORTHO05D004950 3.1e-23 111.7 88 59.1
Peaxi162Scf00128g01124 Petunia axillaris HOM05D004390 ORTHO05D004950 3.1e-23 111.7 91 57.1
Lsat_1_v5_gn_3_29821 Lactuca sativa HOM05D004390 ORTHO05D004950 4.0e-23 111.3 90 55.6
Potri.010G059300 Populus trichocarpa HOM05D004390 ORTHO05D004950 4.0e-23 111.3 94 56.4
Rhsim12G0027700 Rhododendron simsii HOM05D004390 ORTHO05D004950 4.0e-23 111.3 91 53.8
Oeu058917.1 Olea europaea HOM05D004390 ORTHO05D004950 5.3e-23 110.9 91 57.1
BraA09t41150Z Brassica rapa HOM05D004390 ORTHO05D004950 6.9e-23 110.5 89 53.9
Ca_16468_v3 Cicer arietinum L. HOM05D004390 ORTHO05D004950 6.9e-23 110.5 93 53.8
Nitab4.5_0000592g0450 Nicotiana tabacum HOM05D004390 ORTHO05D004950 6.9e-23 110.5 91 57.1
A09p57580 Brassica napus HOM05D004390 ORTHO05D004950 9.0e-23 110.2 89 53.9
C08p40770 Brassica napus HOM05D004390 ORTHO05D004950 9.0e-23 110.2 89 53.9
Potri.008G175775 Populus trichocarpa HOM05D004390 ORTHO05D004950 1.2e-22 109.8 95 53.7
Aa31LG6G15170 Aethionema arabicum HOM05D004390 ORTHO05D004950 1.5e-22 109.4 90 56.7
DCAR_031195 Daucus carota HOM05D001171 ORTHO05D006126 2.0e-22 109.0 79 55.7
Os12g0438900 Oryza sativa ssp. japonica HOM05D004390 ORTHO05D004950 2.0e-22 109.0 95 50.5
CAN.G638.34 Capsicum annuum HOM05D004390 ORTHO05D004950 4.5e-22 107.8 91 56.0
Ah.02g130970 Amaranthus hybridus HOM05D004390 ORTHO05D004950 5.8e-22 107.5 93 49.5
Carub.0003s1416 Capsella rubella HOM05D004390 ORTHO05D004950 5.8e-22 107.5 90 51.1
CARHR089330 Cardamine hirsuta HOM05D004390 ORTHO05D004950 5.8e-22 107.5 80 56.2
Sopen03g001750 Solanum pennellii HOM05D004390 ORTHO05D004950 5.8e-22 107.5 91 56.0
BcaC07g41074 Brassica carinata HOM05D004390 ORTHO05D004950 7.6e-22 107.1 89 52.8
BolC8t51641H Brassica oleracea HOM05D004390 ORTHO05D004950 7.6e-22 107.1 89 52.8
EL10Ac6g13484 Beta vulgaris HOM05D004390 ORTHO05D004950 1.3e-21 106.3 92 53.3
BcaB08g35066 Brassica carinata HOM05D004390 ORTHO05D004950 1.7e-21 105.9 91 52.7
AUR62024125 Chenopodium quinoa HOM05D004390 ORTHO05D004950 4.9e-21 104.4 79 55.7
HPP92_024163 Vanilla planifolia HOM05D000064 ORTHO05D000281 1.4e-20 102.8 92 53.3
HPP92_024177 Vanilla planifolia HOM05D004390 ORTHO05D004950 1.4e-20 102.8 92 53.3
SMO364G0480 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 1.9e-20 102.4 78 56.4
ClCG09G006830 Citrullus lanatus HOM05D004390 ORTHO05D004950 3.2e-20 101.7 92 53.3
Zm00001eb052740 Zea mays HOM05D004390 ORTHO05D004950 3.2e-20 101.7 80 52.5
RcHm_v2.0_Chr4g0430591 Rosa chinensis HOM05D004390 ORTHO05D004950 7.1e-20 100.5 82 57.3
Zm00001eb218300 Zea mays HOM05D004390 ORTHO05D004950 1.6e-19 99.4 80 51.2
Lalb_Chr07g0187411 Lupinus albus HOM05D004390 ORTHO05D004950 2.7e-19 98.6 80 55.0
Ah.03g136230 Amaranthus hybridus HOM05D001171 ORTHO05D006126 7.9e-19 97.1 92 51.1
Lalb_Chr12g0206281 Lupinus albus HOM05D004390 ORTHO05D004950 7.9e-19 97.1 82 53.7
MBI07_g16243_MAGBIO Magnolia biondii HOM05D002351 ORTHO05D004950 7.9e-19 97.1 75 57.3
Pp3c4_12150 Physcomitrium patens HOM05D004390 ORTHO05D004950 1.3e-18 96.3 93 46.2
CiPaw.05G111600 Carya illinoinensis HOM05D004390 ORTHO05D004950 3.9e-18 94.7 74 56.8
MD13G1117200 Malus domestica HOM05D004390 ORTHO05D004950 3.9e-18 94.7 82 56.1
ATR1098G064 Amborella trichopoda HOM05D004390 ORTHO05D004950 5.1e-18 94.4 86 51.2
Mapoly0041s0086 Marchantia polymorpha HOM05D004390 ORTHO05D004950 6.7e-18 94.0 93 49.5
ATR0561G166 Amborella trichopoda HOM05D004390 ORTHO05D004950 8.7e-18 93.6 96 47.9
SEGI_16803 Sequoiadendron giganteum HOM05D004390 ORTHO05D004950 8.7e-18 93.6 101 47.5
TPR.G10940 Trifolium pratense HOM05D004390 ORTHO05D004950 3.7e-16 88.2 65 60.0
Pp3c10_14440 Physcomitrium patens HOM05D004390 ORTHO05D004950 8.2e-16 87.0 96 43.8
Solyc03g005740.3 Solanum lycopersicum HOM05D004390 ORTHO05D004950 9.0e-15 83.6 79 50.6
MBI07_g34630_MAGBIO Magnolia biondii HOM05D004390 ORTHO05D004950 1.2e-14 83.2 67 47.8
Sp3g12740 Schrenkiella parvula HOM05D004390 ORTHO05D004950 1.4e-12 76.3 61 50.8
MCO16G111 Micromonas commoda HOM05D004390 ORTHO05D004950 3.2e-12 75.1 79 40.5
Nn4g24822 Nelumbo nucifera HOM05D002155 ORTHO05D004950 9.4e-12 73.6 72 51.4
PRCOL_00005433 Prasinoderma coloniale HOM05D004390 ORTHO05D004950 1.6e-11 72.8 71 43.7
Manes.13G018500 Manihot esculenta HOM05D004390 ORTHO05D004950 2.1e-11 72.4 71 47.9
CBR_g48133 Chara braunii HOM05D004390 ORTHO05D004950 3.6e-11 71.6 69 44.9
Nn1g04852 Nelumbo nucifera HOM05D004390 ORTHO05D004950 7.9e-11 70.5 52 61.5
SMO145G0172 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 4.3e-09 64.7 69 37.7
Lalb_Chr22g0358881 Lupinus albus HOM05D004390 ORTHO05D004950 4.8e-08 61.2 37 64.9
Pp3c3_460 Physcomitrium patens HOM05D004390 ORTHO05D004950 4.1e-07 58.2 73 37.0
SMO197G0059 Selaginella moellendorffii HOM05D004390 ORTHO05D004950 3.4e-06 55.1 71 35.2


User provided reference genes

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