Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G3529 Papaver somniferum HOM05D004870 ORTHO05D006061 4.7e-135 484.6 251 100.0
PSO339G2837 Papaver somniferum HOM05D004870 ORTHO05D006061 1.4e-107 393.3 251 80.5
PSO782G4799 Papaver somniferum HOM05D004870 ORTHO05D006061 3.3e-104 382.1 310 68.7
PSO063G7087 Papaver somniferum HOM05D004870 ORTHO05D006061 4.3e-104 381.7 310 67.7
PSO339G5988 Papaver somniferum HOM05D004870 ORTHO05D006061 3.4e-101 372.1 310 66.1
Nn3g18601 Nelumbo nucifera HOM05D004870 ORTHO05D006061 9.6e-88 327.4 310 57.7
TAR629G3247 Trochodendron aralioides HOM05D004870 ORTHO05D006061 2.1e-87 326.2 310 57.4
TWI53G0925 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.2e-85 320.5 309 57.0
TWI74G1525 Tripterygium wilfordii HOM05D004870 ORTHO05D006061 1.2e-82 310.5 310 55.8
Thecc.02G155600 Theobroma cacao HOM05D004870 ORTHO05D006061 2.1e-82 309.7 279 59.5
Manes.15G107800 Manihot esculenta HOM05D004870 ORTHO05D006061 2.7e-82 309.3 310 54.8
Duzib132G1043 Durio zibethinus HOM05D004870 ORTHO05D006061 4.6e-82 308.5 309 55.7
CSS0023232 Camellia sinensis var. sinensis HOM05D004870 ORTHO05D006061 7.9e-82 307.8 316 55.1
MD10G1280100 Malus domestica HOM05D004870 ORTHO05D006061 7.9e-82 307.8 309 55.0
Potri.005G089700 Populus trichocarpa HOM05D004870 ORTHO05D006061 7.9e-82 307.8 312 54.5
MBI03_g13828_MAGBIO Magnolia biondii HOM05D004870 ORTHO05D006061 1.3e-81 307.0 310 54.2
COL.COLO4_33098 Corchorus olitorius HOM05D004870 ORTHO05D006061 1.8e-81 306.6 279 59.5
Dinv25387 Davidia involucrata HOM05D004870 ORTHO05D006061 1.8e-81 306.6 281 59.4
GSVIVG01026142001 Vitis vinifera HOM05D004870 ORTHO05D006061 1.8e-81 306.6 297 58.2
Eucgr.I02621 Eucalyptus grandis HOM05D004870 ORTHO05D006061 2.3e-81 306.2 310 54.8
CiPaw.05G171200 Carya illinoinensis HOM05D004870 ORTHO05D006061 6.7e-81 304.7 310 54.5
Prupe.4G061300 Prunus persica HOM05D004870 ORTHO05D006061 6.7e-81 304.7 310 53.5
Actinidia04336 Actinidia chinensis HOM05D004870 ORTHO05D006061 8.7e-81 304.3 314 54.8
Duzib248G0882 Durio zibethinus HOM05D004870 ORTHO05D006061 1.1e-80 303.9 282 58.5
Cfa008769 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.5e-80 303.5 310 54.5
Gohir.D02G189300 Gossypium hirsutum HOM05D004870 ORTHO05D006061 2.5e-80 302.8 310 54.5
Gorai.005G212000 Gossypium raimondii HOM05D004870 ORTHO05D006061 2.5e-80 302.8 310 54.5
Glyma.10G286200 Glycine max HOM05D004870 ORTHO05D006061 4.3e-80 302.0 310 54.2
Thhalv10004171m.g Eutrema salsugineum HOM05D004870 ORTHO05D006061 7.4e-80 301.2 315 54.9
Gohir.A03G166000 Gossypium hirsutum HOM05D004870 ORTHO05D006061 7.4e-80 301.2 310 54.2
TPR.G4052 Trifolium pratense HOM05D004870 ORTHO05D006061 7.4e-80 301.2 310 53.9
Dinv17644 Davidia involucrata HOM05D004870 ORTHO05D006061 9.6e-80 300.8 273 59.7
Sabra05G0073800 Salix brachista HOM05D004870 ORTHO05D006061 9.6e-80 300.8 312 53.2
AL6G34560 Arabidopsis lyrata HOM05D004870 ORTHO05D006061 1.6e-79 300.1 311 54.7
Atru.chr11.1102 Acer truncatum HOM05D004870 ORTHO05D006061 2.1e-79 299.7 281 58.7
Atru.chr11.1106 Acer truncatum HOM05D004870 ORTHO05D006061 2.1e-79 299.7 281 58.7
CARHR190240 Cardamine hirsuta HOM05D004870 ORTHO05D006061 2.1e-79 299.7 312 54.8
Glyma.20G103100 Glycine max HOM05D004870 ORTHO05D006061 2.1e-79 299.7 310 53.2
MD05G1301200 Malus domestica HOM05D004870 ORTHO05D006061 2.1e-79 299.7 309 54.0
Ca_11257_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.8e-79 299.3 309 53.7
Sp2g23850 Schrenkiella parvula HOM05D004870 ORTHO05D006061 3.7e-79 298.9 281 58.7
THA.LOC104800685 Tarenaya hassleriana HOM05D004870 ORTHO05D006061 3.7e-79 298.9 315 54.3
Carub.0006s2107 Capsella rubella HOM05D004870 ORTHO05D006061 8.1e-79 297.7 281 58.4
AT5G23300 Arabidopsis thaliana HOM05D004870 ORTHO05D006061 1.1e-78 297.4 281 58.0
Haze_11781 Corylus avellana HOM05D004870 ORTHO05D006061 1.1e-78 297.4 318 53.1
FvH4_3g07800 Fragaria vesca HOM05D004870 ORTHO05D006061 1.1e-78 297.4 313 54.3
FAN25G2081 Fragaria x ananassa HOM05D004870 ORTHO05D006061 1.1e-78 297.4 313 54.3
Medtr1g114530 Medicago truncatula HOM05D004870 ORTHO05D006061 1.1e-78 297.4 310 53.2
RcHm_v2.0_Chr5g0010781 Rosa chinensis HOM05D004870 ORTHO05D006061 1.1e-78 297.4 313 54.3
arahy.Tifrunner.gnm1.ann1.GVRL8L Arachis hypogaea HOM05D004870 ORTHO05D006061 1.4e-78 297.0 273 57.9
arahy.Tifrunner.gnm1.ann1.NQ58Z6 Arachis hypogaea HOM05D004870 ORTHO05D006061 1.4e-78 297.0 273 57.9
Psat6g233800 Pisum sativum HOM05D004870 ORTHO05D006061 1.4e-78 297.0 307 53.4
PGR142G2596 Punica granatum HOM05D004870 ORTHO05D006061 1.4e-78 297.0 265 60.0
Migut.N00083 Erythranthe guttata HOM05D004870 ORTHO05D006061 6.9e-78 294.7 277 57.4
Phvul.007G014700 Phaseolus vulgaris HOM05D004870 ORTHO05D006061 6.9e-78 294.7 310 52.9
FAN16G1105 Fragaria x ananassa HOM05D004870 ORTHO05D006061 9.0e-78 294.3 313 53.7
Lj5g0006106 Lotus japonicus HOM05D004870 ORTHO05D006061 9.0e-78 294.3 310 52.6
Solyc01g008290.3 Solanum lycopersicum HOM05D004870 ORTHO05D006061 1.2e-77 293.9 272 58.5
Sopen01g003810 Solanum pennellii HOM05D004870 ORTHO05D006061 1.2e-77 293.9 272 58.5
VMungo0720G1992 Vigna mungo HOM05D004870 ORTHO05D006061 1.2e-77 293.9 310 52.9
Ciclev10031476m.g Citrus clementina HOM05D004870 ORTHO05D006061 1.5e-77 293.5 287 57.5
DCAR_002602 Daucus carota HOM05D004870 ORTHO05D006061 1.5e-77 293.5 277 58.1
Sc06g0006850 Simmondsia chinensis HOM05D004870 ORTHO05D006061 1.5e-77 293.5 272 58.1
ATR0618G304 Amborella trichopoda HOM05D004870 ORTHO05D006061 2.0e-77 293.1 309 54.4
C07p44260 Brassica napus HOM05D004870 ORTHO05D006061 2.0e-77 293.1 283 57.6
BolC7t44949H Brassica oleracea HOM05D004870 ORTHO05D006061 2.0e-77 293.1 283 57.6
Aa31LG11G2760 Aethionema arabicum HOM05D004870 ORTHO05D006061 2.6e-77 292.7 319 53.6
BcaB04g19879 Brassica carinata HOM05D004870 ORTHO05D006061 2.6e-77 292.7 262 61.5
MELO3C005067.2 Cucumis melo HOM05D004870 ORTHO05D006061 2.6e-77 292.7 310 52.9
Cc11_g00600 Coffea canephora HOM05D004870 ORTHO05D006061 3.4e-77 292.4 258 60.9
Peaxi162Scf00021g02316 Petunia axillaris HOM05D004870 ORTHO05D006061 3.4e-77 292.4 275 57.8
PGSC0003DMG401016396 Solanum tuberosum HOM05D004870 ORTHO05D006061 3.4e-77 292.4 274 57.7
A06p34260 Brassica napus HOM05D004870 ORTHO05D006061 4.5e-77 292.0 283 57.6
BraA06t26358Z Brassica rapa HOM05D004870 ORTHO05D006061 4.5e-77 292.0 283 57.6
CAN.G282.44 Capsicum annuum HOM05D004870 ORTHO05D006061 4.5e-77 292.0 264 59.1
SGA_v2.0_scaffold91G28011 Striga asiatica HOM05D004870 ORTHO05D006061 4.5e-77 292.0 272 57.7
FAN11G2678 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.8e-77 291.6 313 53.7
FAN21G1781 Fragaria x ananassa HOM05D004870 ORTHO05D006061 5.8e-77 291.6 313 53.7
QL06p048547 Quercus lobata HOM05D004870 ORTHO05D006061 7.6e-77 291.2 309 52.8
ClCG01G008090 Citrullus lanatus HOM05D004870 ORTHO05D006061 1.0e-76 290.8 310 53.2
Lsat_1_v5_gn_1_81660 Lactuca sativa HOM05D004870 ORTHO05D006061 1.0e-76 290.8 314 52.9
BraA09t36349Z Brassica rapa HOM05D004870 ORTHO05D006061 1.3e-76 290.4 278 57.6
CsaV3_5G020740 Cucumis sativus L. HOM05D004870 ORTHO05D006061 1.3e-76 290.4 310 52.6
C09p07820 Brassica napus HOM05D004870 ORTHO05D006061 2.2e-76 289.7 281 57.7
BolC9t53698H Brassica oleracea HOM05D004870 ORTHO05D006061 2.2e-76 289.7 281 57.7
DCAR_026881 Daucus carota HOM05D004870 ORTHO05D006061 2.2e-76 289.7 265 58.9
Lalb_Chr02g0143631 Lupinus albus HOM05D004870 ORTHO05D006061 2.9e-76 289.3 272 57.4
ECA234G2132 Erigeron canadensis HOM05D004870 ORTHO05D006061 8.4e-76 287.7 312 54.2
A09p07010 Brassica napus HOM05D004870 ORTHO05D006061 1.1e-75 287.3 278 57.2
QL03p045749 Quercus lobata HOM05D004870 ORTHO05D006061 1.4e-75 287.0 275 57.1
Rhsim09G0069200 Rhododendron simsii HOM05D004870 ORTHO05D006061 1.4e-75 287.0 257 60.3
SalBow5G5328 Salvia bowleyana HOM05D004870 ORTHO05D006061 3.2e-75 285.8 271 56.5
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 4.2e-75 285.4 258 58.9
HanXRQChr01g0018971 Helianthus annuus HOM05D004870 ORTHO05D006061 4.2e-75 285.4 282 56.0
Sed0016006 Sechium edule HOM05D004870 ORTHO05D006061 1.6e-74 283.5 310 51.9
SGA_v2.0_scaffold428G51528 Striga asiatica HOM05D004870 ORTHO05D006061 6.0e-74 281.6 287 54.0
HPP92_014771 Vanilla planifolia HOM05D004870 ORTHO05D006061 7.9e-74 281.2 273 57.1
Oeu063362.5 Olea europaea HOM05D004870 ORTHO05D006061 1.0e-73 280.8 276 56.5
CsaV3_1G039280 Cucumis sativus L. HOM05D004870 ORTHO05D006061 2.3e-73 279.6 310 51.9
EL10Ac7g17331 Beta vulgaris HOM05D004870 ORTHO05D006061 3.0e-73 279.3 254 59.1
Ah.08g211980 Amaranthus hybridus HOM05D004870 ORTHO05D006061 8.7e-73 277.7 274 55.1
CDE05G3274 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 8.7e-73 277.7 309 51.5
MELO3C015352.2 Cucumis melo HOM05D004870 ORTHO05D006061 1.3e-71 273.9 310 51.0
HanXRQChr01g0018951 Helianthus annuus HOM05D004870 ORTHO05D006061 1.8e-70 270.0 242 59.9
Zm00001eb433680 Zea mays HOM05D004870 ORTHO05D006061 3.1e-70 269.2 258 56.2
Os04g0676300 Oryza sativa ssp. japonica HOM05D004870 ORTHO05D006061 4.1e-70 268.9 258 55.4
Hund08594 Selenicereus undatus HOM05D004870 ORTHO05D006061 1.2e-69 267.3 312 49.7
Nitab4.5_0006274g0020 Nicotiana tabacum HOM05D004870 ORTHO05D006061 3.4e-69 265.8 263 56.7
vmacro15993 Vaccinium macrocarpon HOM05D004870 ORTHO05D006061 5.8e-69 265.0 370 45.4
ECA248G2791 Erigeron canadensis HOM05D004870 ORTHO05D006061 3.8e-68 262.3 265 55.1
Nitab4.5_0000069g0140 Nicotiana tabacum HOM05D004870 ORTHO05D006061 2.5e-67 259.6 218 62.8
Lsat_1_v5_gn_1_81640 Lactuca sativa HOM05D004870 ORTHO05D006061 9.3e-67 257.7 258 54.7
Lj3A847T44 Lonicera japonica HOM05D004870 ORTHO05D006061 3.5e-66 255.8 236 59.3
AUR62002708 Chenopodium quinoa HOM05D004870 ORTHO05D006061 6.9e-62 241.5 229 58.1
AUR62030167 Chenopodium quinoa HOM05D004870 ORTHO05D006061 6.9e-62 241.5 229 58.1
Mapoly0020s0155 Marchantia polymorpha HOM05D004870 ORTHO05D006061 7.7e-61 238.0 256 51.2
Pp3c9_12870 Physcomitrium patens HOM05D004870 ORTHO05D006061 8.5e-60 234.6 254 51.2
SMO351G0256 Selaginella moellendorffii HOM05D004870 ORTHO05D006061 8.5e-60 234.6 258 49.6
BcaC04g23488 Brassica carinata HOM05D004870 ORTHO05D006061 1.1e-59 234.2 287 49.5
Prupe.6G003700 Prunus persica HOM05D004870 ORTHO05D006061 5.5e-59 231.9 269 51.7
Potri.007G074201 Populus trichocarpa HOM05D004870 ORTHO05D006061 2.7e-58 229.6 261 50.6
Pp3c15_6200 Physcomitrium patens HOM05D004870 ORTHO05D006061 2.3e-57 226.5 272 48.9
SHI28437 Sapria himalayana HOM05D004870 ORTHO05D006061 2.5e-56 223.0 228 53.9
unitig_749.g13388 Utricularia gibba HOM05D004870 ORTHO05D006061 4.1e-54 215.7 258 48.4
AagrBONN_evm.TU.Sc2ySwM_340.305 Anthoceros agrestis HOM05D004870 ORTHO05D006061 2.7e-50 203.0 230 49.6
CDE05G3051 Ceratophyllum demersum HOM05D004870 ORTHO05D006061 6.3e-47 191.8 199 52.3
CBR_g49488 Chara braunii HOM05D004870 ORTHO05D006061 3.2e-43 179.5 273 38.5
CBR_g53542 Chara braunii HOM05D004870 ORTHO05D006061 3.6e-42 176.0 272 39.0
SEGI_23530 Sequoiadendron giganteum HOM05D004870 ORTHO05D006061 3.7e-39 166.0 153 56.2
Cre03.g199423 Chlamydomonas reinhardtii HOM05D004870 ORTHO05D006061 1.7e-31 140.6 210 40.0
AagrBONN_evm.TU.Sc2ySwM_228.5917 Anthoceros agrestis HOM05D004870 ORTHO05D006061 3.5e-29 132.9 128 54.7
Thecc.02G156000 Theobroma cacao HOM05D004870 ORTHO05D006061 8.5e-28 128.3 142 54.2
MCO08G060 Micromonas commoda HOM05D004870 ORTHO05D006061 1.9e-27 127.1 258 35.3
C08p27210 Brassica napus HOM05D004870 ORTHO05D006061 6.1e-26 122.1 83 72.3
Haze_27018 Corylus avellana HOM05D004870 ORTHO05D006061 2.7e-13 80.1 233 25.8
Cfa021670 Carpinus fangiana HOM05D004870 ORTHO05D006061 1.2e-10 71.2 226 29.2
Ca_29057_v3 Cicer arietinum L. HOM05D004870 ORTHO05D006061 2.8e-10 70.1 148 30.4


User provided reference genes

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