Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2816 Papaver somniferum HOM05D005952 ORTHO05D007262 5.0e-162 574.7 367 100.0
PSO063G3255 Papaver somniferum HOM05D005952 ORTHO05D007262 2.8e-152 542.3 366 93.7
TAR622G0739 Trochodendron aralioides HOM05D005952 ORTHO05D007262 1.3e-117 427.2 371 67.9
Nn3g16502 Nelumbo nucifera HOM05D005952 ORTHO05D007262 4.9e-117 425.2 370 68.4
Aqoxy5G03416 Aquilegia oxysepala HOM05D005952 ORTHO05D007262 3.3e-113 412.5 378 69.3
Manes.13G018200 Manihot esculenta HOM05D005952 ORTHO05D007262 9.6e-113 411.0 298 75.5
Cc00_g13550 Coffea canephora HOM05D005952 ORTHO05D007262 2.8e-112 409.5 313 70.9
Peaxi162Scf00518g00512 Petunia axillaris HOM05D005952 ORTHO05D007262 1.4e-111 407.1 377 67.1
CANSAT01G2967 Cannabis sativa HOM05D005952 ORTHO05D007262 4.1e-111 405.6 325 71.7
Gohir.A03G127000 Gossypium hirsutum HOM05D005952 ORTHO05D007262 4.1e-111 405.6 321 70.1
QL03p053757 Quercus lobata HOM05D005952 ORTHO05D007262 5.3e-111 405.2 293 74.7
PGR102G2583 Punica granatum HOM05D005952 ORTHO05D007262 9.0e-111 404.4 324 68.2
MBI11_g07451_MAGBIO Magnolia biondii HOM05D005952 ORTHO05D007262 1.5e-110 403.7 268 78.4
Potri.010G059100 Populus trichocarpa HOM05D005952 ORTHO05D007262 1.5e-110 403.7 331 72.5
Gohir.D02G150400 Gossypium hirsutum HOM05D005952 ORTHO05D007262 2.0e-110 403.3 321 70.1
Gorai.005G168700 Gossypium raimondii HOM05D005952 ORTHO05D007262 2.6e-110 402.9 324 70.7
Solyc12g035650.2 Solanum lycopersicum HOM05D005952 ORTHO05D007262 2.6e-110 402.9 330 69.1
Sopen12g015910 Solanum pennellii HOM05D005952 ORTHO05D007262 2.6e-110 402.9 330 69.1
CSS0022532 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.4e-110 402.5 277 76.2
CSS0029993 Camellia sinensis var. sinensis HOM05D005952 ORTHO05D007262 3.4e-110 402.5 277 76.2
Duzib251G0036 Durio zibethinus HOM05D005952 ORTHO05D007262 5.9e-110 401.7 320 71.6
Prupe.1G228700 Prunus persica HOM05D005952 ORTHO05D007262 5.9e-110 401.7 366 63.4
Thecc.02G212400 Theobroma cacao HOM05D005952 ORTHO05D007262 5.9e-110 401.7 283 76.7
Eucgr.B03481 Eucalyptus grandis HOM05D005952 ORTHO05D007262 1.7e-109 400.2 299 72.2
TWI75G1563 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 6.5e-109 398.3 323 68.4
MSTRG.7992 Avicennia marina HOM05D005952 ORTHO05D007262 1.9e-108 396.7 297 71.4
COL.COLO4_20379 Corchorus olitorius HOM05D005952 ORTHO05D007262 1.9e-108 396.7 349 66.2
Dinv14825 Davidia involucrata HOM05D005952 ORTHO05D007262 2.5e-108 396.4 287 73.9
Sabra10G0046500 Salix brachista HOM05D005952 ORTHO05D007262 4.2e-108 395.6 313 69.6
TWI36G0663 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 4.2e-108 395.6 266 76.7
CiPaw.06G101100 Carya illinoinensis HOM05D005952 ORTHO05D007262 5.5e-108 395.2 327 71.9
Ciclev10031923m.g Citrus clementina HOM05D005952 ORTHO05D007262 9.3e-108 394.4 297 72.4
GSVIVG01010442001 Vitis vinifera HOM05D005952 ORTHO05D007262 9.3e-108 394.4 262 78.6
MD16G1117500 Malus domestica HOM05D005952 ORTHO05D007262 1.2e-107 394.0 316 68.4
Lj3A1066G68 Lonicera japonica HOM05D005952 ORTHO05D007262 1.6e-107 393.7 285 74.4
Nitab4.5_0000492g0130 Nicotiana tabacum HOM05D005952 ORTHO05D007262 1.6e-107 393.7 329 70.2
Actinidia20698 Actinidia chinensis HOM05D005952 ORTHO05D007262 2.7e-107 392.9 286 73.4
Cfa009332 Carpinus fangiana HOM05D005952 ORTHO05D007262 2.7e-107 392.9 292 72.6
CAN.G34.9 Capsicum annuum HOM05D005952 ORTHO05D007262 3.6e-107 392.5 336 67.3
Hund06080 Selenicereus undatus HOM05D005952 ORTHO05D007262 3.6e-107 392.5 267 76.4
EL10Ac6g13481 Beta vulgaris HOM05D005952 ORTHO05D007262 6.1e-107 391.7 319 66.8
ClCG11G013770 Citrullus lanatus HOM05D005952 ORTHO05D007262 7.9e-107 391.3 321 67.3
Ah.02g130720 Amaranthus hybridus HOM05D005952 ORTHO05D007262 2.3e-106 389.8 267 75.7
AUR62024128 Chenopodium quinoa HOM05D005952 ORTHO05D007262 2.3e-106 389.8 318 66.4
RcHm_v2.0_Chr4g0430621 Rosa chinensis HOM05D005952 ORTHO05D007262 2.3e-106 389.8 321 67.3
CsaV3_5G030360 Cucumis sativus L. HOM05D005952 ORTHO05D007262 3.0e-106 389.4 322 66.8
MD13G1116800 Malus domestica HOM05D005952 ORTHO05D007262 8.7e-106 387.9 262 77.5
MELO3C011875.2 Cucumis melo HOM05D005952 ORTHO05D007262 1.9e-105 386.7 322 66.5
FAN07G2304 Fragaria x ananassa HOM05D005952 ORTHO05D007262 5.7e-105 385.2 312 68.6
Lsat_1_v5_gn_8_149221 Lactuca sativa HOM05D005952 ORTHO05D007262 5.7e-105 385.2 336 64.0
FAN07G2604 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.4e-105 384.8 317 68.1
FAN24G3446 Fragaria x ananassa HOM05D005952 ORTHO05D007262 7.4e-105 384.8 317 68.1
Atru.chr11.2304 Acer truncatum HOM05D005952 ORTHO05D007262 1.3e-104 384.0 300 70.0
arahy.Tifrunner.gnm1.ann1.19W7I6 Arachis hypogaea HOM05D005952 ORTHO05D007262 2.2e-104 383.3 314 66.9
Lj1g0012703 Lotus japonicus HOM05D005952 ORTHO05D007262 2.2e-104 383.3 267 73.8
Haze_12392 Corylus avellana HOM05D005952 ORTHO05D007262 2.8e-104 382.9 330 65.5
FvH4_4g23970 Fragaria vesca HOM05D005952 ORTHO05D007262 2.8e-104 382.9 265 76.2
Glyma.18G008100 Glycine max HOM05D005952 ORTHO05D007262 2.8e-104 382.9 289 70.2
Lalb_Chr12g0206321 Lupinus albus HOM05D005952 ORTHO05D007262 2.8e-104 382.9 320 66.9
VMungo1383G3287 Vigna mungo HOM05D005952 ORTHO05D007262 6.3e-104 381.7 287 69.7
Cpa.g.sc43.12 Carica papaya HOM05D005952 ORTHO05D007262 8.2e-104 381.3 338 63.3
Potri.008G176100 Populus trichocarpa HOM05D005952 ORTHO05D007262 2.4e-103 379.8 291 72.9
Psat5g094800 Pisum sativum HOM05D005952 ORTHO05D007262 9.1e-103 377.9 292 70.5
Phvul.001G260500 Phaseolus vulgaris HOM05D005952 ORTHO05D007262 1.2e-102 377.5 287 69.3
HanXRQChr08g0207671 Helianthus annuus HOM05D005952 ORTHO05D007262 1.5e-102 377.1 336 62.5
ATR0561G264 Amborella trichopoda HOM05D005952 ORTHO05D007262 4.5e-102 375.6 286 68.2
Sed0028059 Sechium edule HOM05D005952 ORTHO05D007262 5.9e-102 375.2 298 68.5
Glyma.11G249200 Glycine max HOM05D005952 ORTHO05D007262 7.7e-102 374.8 286 69.2
Nitab4.5_0002026g0100 Nicotiana tabacum HOM05D005952 ORTHO05D007262 6.5e-101 371.7 325 66.2
Oeu036880.1 Olea europaea HOM05D005952 ORTHO05D007262 6.5e-101 371.7 361 60.4
Sc04g0004640 Simmondsia chinensis HOM05D005952 ORTHO05D007262 6.5e-101 371.7 264 70.8
CDE02G4251 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 8.5e-101 371.3 370 58.1
Migut.K00712 Erythranthe guttata HOM05D005952 ORTHO05D007262 8.5e-101 371.3 313 67.1
SGA_v2.0_scaffold9G04762 Striga asiatica HOM05D005952 ORTHO05D007262 8.5e-101 371.3 288 69.1
THA.LOC104825515 Tarenaya hassleriana HOM05D005952 ORTHO05D007262 5.5e-100 368.6 286 68.9
Medtr3g085590 Medicago truncatula HOM05D005952 ORTHO05D007262 7.9e-99 364.8 267 71.9
FAN03G3372 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.0e-98 362.8 327 64.8
C03p73530 Brassica napus HOM05D005952 ORTHO05D007262 1.1e-97 360.9 319 62.7
Rhsim12G0102200 Rhododendron simsii HOM05D005952 ORTHO05D007262 1.5e-97 360.5 370 58.4
BolC3t19647H Brassica oleracea HOM05D005952 ORTHO05D007262 2.0e-97 360.1 318 62.3
BraA08t34603Z Brassica rapa HOM05D005952 ORTHO05D007262 3.3e-97 359.4 325 64.0
BcaC01g01637 Brassica carinata HOM05D005952 ORTHO05D007262 4.4e-97 359.0 322 64.0
ECA233G5976 Erigeron canadensis HOM05D005952 ORTHO05D007262 4.4e-97 359.0 324 63.3
BcaB03g12064 Brassica carinata HOM05D005952 ORTHO05D007262 7.4e-97 358.2 324 64.2
AT1G24310 Arabidopsis thaliana HOM05D005952 ORTHO05D007262 9.7e-97 357.8 284 66.2
A08p26510 Brassica napus HOM05D005952 ORTHO05D007262 9.7e-97 357.8 324 63.6
CARHR026780 Cardamine hirsuta HOM05D005952 ORTHO05D007262 1.7e-96 357.1 323 63.8
Carub.0001s2576 Capsella rubella HOM05D005952 ORTHO05D007262 4.8e-96 355.5 267 68.5
Sp1g23460 Schrenkiella parvula HOM05D005952 ORTHO05D007262 2.4e-95 353.2 322 62.4
AL1G40610 Arabidopsis lyrata HOM05D005952 ORTHO05D007262 3.1e-95 352.8 364 59.6
FAN27G1928 Fragaria x ananassa HOM05D005952 ORTHO05D007262 3.8e-93 345.9 280 68.2
Ca_16474_v3 Cicer arietinum L. HOM05D005952 ORTHO05D007262 6.5e-93 345.1 245 73.1
AUR62005599 Chenopodium quinoa HOM05D005952 ORTHO05D007262 4.7e-91 339.0 284 64.8
FAN21G1414 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.1e-91 338.6 280 67.9
Sed0012291 Sechium edule HOM05D005952 ORTHO05D007262 6.1e-91 338.6 298 62.8
Aa31LG7G9800 Aethionema arabicum HOM05D005952 ORTHO05D007262 1.4e-90 337.4 369 54.2
DCAR_031192 Daucus carota HOM05D005952 ORTHO05D007262 3.0e-90 336.3 240 72.1
HPP92_023193 Vanilla planifolia HOM05D005952 ORTHO05D007262 2.4e-87 326.6 294 59.5
arahy.Tifrunner.gnm1.ann1.2251QZ Arachis hypogaea HOM05D005952 ORTHO05D007262 7.0e-87 325.1 314 59.9
Os07g0295400 Oryza sativa ssp. japonica HOM05D005952 ORTHO05D007262 2.9e-85 319.7 267 60.7
Zm00001eb305390 Zea mays HOM05D005952 ORTHO05D007262 3.8e-85 319.3 291 58.1
SalBow2G2019 Salvia bowleyana HOM05D005952 ORTHO05D007262 6.7e-82 308.5 265 64.2
CDE06G2258 Ceratophyllum demersum HOM05D005952 ORTHO05D007262 8.2e-80 301.6 370 51.6
SEGI_29251 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 1.4e-79 300.8 266 58.3
FAN04G2616 Fragaria x ananassa HOM05D005952 ORTHO05D007262 1.2e-78 297.7 224 72.3
Mapoly0010s0010 Marchantia polymorpha HOM05D005952 ORTHO05D007262 1.6e-78 297.4 264 58.3
Pp3c10_15930 Physcomitrium patens HOM05D005952 ORTHO05D007262 5.9e-78 295.4 286 54.5
Pp3c10_15937 Physcomitrium patens HOM05D005952 ORTHO05D007262 5.9e-78 295.4 286 54.5
SHI17953 Sapria himalayana HOM05D005952 ORTHO05D007262 1.5e-76 290.8 286 57.3
AagrBONN_evm.TU.Sc2ySwM_362.1552 Anthoceros agrestis HOM05D005952 ORTHO05D007262 1.2e-70 271.2 261 53.3
CBR_g21943 Chara braunii HOM05D005952 ORTHO05D007262 2.9e-69 266.5 268 51.9
CBR_g39502 Chara braunii HOM05D005952 ORTHO05D007262 6.1e-67 258.8 259 51.0
Thhalv10008300m.g Eutrema salsugineum HOM05D005952 ORTHO05D007262 1.0e-61 241.5 208 61.5
FAN04G0683 Fragaria x ananassa HOM05D005952 ORTHO05D007262 2.1e-59 233.8 188 68.1
TWI36G1659 Tripterygium wilfordii HOM05D005952 ORTHO05D007262 2.8e-59 233.4 338 47.3
Hma1.2p1_0668F.1_g200020 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 6.1e-59 232.3 170 74.1
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 3.9e-53 213.0 229 54.6
Actinidia09658 Actinidia chinensis HOM05D005952 ORTHO05D007262 6.8e-50 202.2 307 48.5
Pp3c14_14130 Physcomitrium patens HOM05D005952 ORTHO05D007262 4.1e-47 193.0 155 60.6
FAN23G0106 Fragaria x ananassa HOM05D005952 ORTHO05D007262 6.4e-40 169.1 151 62.3
Hma1.2p1_0668F.1_g200040 Hydrangea macrophylla HOM05D005952 ORTHO05D007262 6.4e-40 169.1 118 74.6
FAN04G0535 Fragaria x ananassa HOM05D005952 ORTHO05D007262 4.1e-31 139.8 109 73.4
SEGI_23869 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 2.8e-27 127.1 97 59.8
HanXRQChr03g0071651 Helianthus annuus HOM05D005952 ORTHO05D007262 2.2e-24 117.5 93 64.5
Migut.K01177 Erythranthe guttata HOM05D005952 ORTHO05D007262 2.3e-21 107.5 101 64.4
SEGI_30692 Sequoiadendron giganteum HOM05D005952 ORTHO05D007262 5.8e-17 92.8 109 46.8
Oeu029609.1 Olea europaea HOM05D005952 ORTHO05D007262 3.5e-14 83.6 62 62.9
Cre12.g542950 Chlamydomonas reinhardtii HOM05D005952 ORTHO05D007262 7.4e-12 75.9 240 28.3
MCO04G375 Micromonas commoda HOM05D005952 ORTHO05D007262 3.7e-11 73.6 135 29.6


User provided reference genes

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