Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2481 Papaver somniferum HOM05D042741 ORTHO05D003021 3.9e-111 404.8 208 100.0
PSO832G4404 Papaver somniferum HOM05D042741 ORTHO05D003021 1.4e-79 300.1 208 78.4
Gohir.A06G062800 Gossypium hirsutum HOM05D002997 ORTHO05D003021 2.2e-13 80.1 205 34.6
Duzib187G1185 Durio zibethinus HOM05D002997 ORTHO05D003021 4.2e-12 75.9 203 32.0
Gorai.001G005300 Gossypium raimondii HOM05D002997 ORTHO05D003021 5.4e-12 75.5 188 35.6
Thecc.09G110100 Theobroma cacao HOM05D002997 ORTHO05D003021 7.1e-12 75.1 212 33.0
Gohir.D07G005700 Gossypium hirsutum HOM05D002997 ORTHO05D003021 2.7e-11 73.2 188 35.1
Gohir.A07G006300 Gossypium hirsutum HOM05D002997 ORTHO05D003021 4.6e-11 72.4 188 34.6
Psat1g042720 Pisum sativum HOM05D002997 ORTHO05D003021 6.0e-11 72.0 186 30.6
Ciclev10009432m.g Citrus clementina HOM05D002997 ORTHO05D003021 3.0e-10 69.7 217 30.0
Eucgr.C01041 Eucalyptus grandis HOM05D002997 ORTHO05D003021 1.5e-09 67.4 215 29.8
CSS0030169 Camellia sinensis var. sinensis HOM05D002997 ORTHO05D003021 1.9e-09 67.0 207 30.4
Dinv41605 Davidia involucrata HOM05D002997 ORTHO05D003021 1.9e-09 67.0 213 27.7
TAR636G2256 Trochodendron aralioides HOM05D002997 ORTHO05D003021 1.9e-09 67.0 207 31.9
VMungo0464G1542 Vigna mungo HOM05D002997 ORTHO05D003021 1.9e-09 67.0 217 28.1
Lj2g0000274 Lotus japonicus HOM05D002997 ORTHO05D003021 2.5e-09 66.6 203 30.5
Lalb_Chr22g0352801 Lupinus albus HOM05D002997 ORTHO05D003021 2.5e-09 66.6 198 27.8
TPR.G13701 Trifolium pratense HOM05D002997 ORTHO05D003021 2.5e-09 66.6 194 32.0
Medtr6g086915 Medicago truncatula HOM05D002997 ORTHO05D003021 5.6e-09 65.5 186 31.2
Phvul.004G163500 Phaseolus vulgaris HOM05D002997 ORTHO05D003021 7.4e-09 65.1 217 28.6
PGR142G3077 Punica granatum HOM05D002997 ORTHO05D003021 7.4e-09 65.1 219 31.5
Cc06_g09680 Coffea canephora HOM05D002997 ORTHO05D003021 9.6e-09 64.7 228 29.4
CSS0015499 Camellia sinensis var. sinensis HOM05D002997 ORTHO05D003021 2.1e-08 63.5 204 30.9
CSS0016234 Camellia sinensis var. sinensis HOM05D002997 ORTHO05D003021 2.1e-08 63.5 204 30.9
Prupe.7G231300 Prunus persica HOM05D002997 ORTHO05D003021 2.1e-08 63.5 218 28.0
Sc18g0001230 Simmondsia chinensis HOM05D002997 ORTHO05D003021 2.1e-08 63.5 218 30.3
SGA_v2.0_scaffold37G14833 Striga asiatica HOM05D002997 ORTHO05D003021 2.1e-08 63.5 200 29.0
MD02G1046500 Malus domestica HOM05D002997 ORTHO05D003021 2.8e-08 63.2 206 28.2
QL02p085284 Quercus lobata HOM05D002997 ORTHO05D003021 3.7e-08 62.8 212 25.9
TPR.G21686 Trifolium pratense HOM05D002997 ORTHO05D003021 3.7e-08 62.8 205 27.8
Ca_17338_v3 Cicer arietinum L. HOM05D002997 ORTHO05D003021 4.8e-08 62.4 198 31.3
Migut.I00887 Erythranthe guttata HOM05D002997 ORTHO05D003021 4.8e-08 62.4 200 29.5
THA.LOC104804590 Tarenaya hassleriana HOM05D002997 ORTHO05D003021 4.8e-08 62.4 182 30.2
COL.COLO4_34929 Corchorus olitorius HOM05D002997 ORTHO05D003021 6.2e-08 62.0 120 35.8
MSTRG.22676 Avicennia marina HOM05D002997 ORTHO05D003021 8.1e-08 61.6 196 28.6
CSS0043954 Camellia sinensis var. sinensis HOM05D002997 ORTHO05D003021 8.1e-08 61.6 208 29.8
Haze_25717 Corylus avellana HOM05D002997 ORTHO05D003021 1.4e-07 60.8 190 30.5
Glyma.08G038500 Glycine max HOM05D002997 ORTHO05D003021 1.8e-07 60.5 207 29.0
Nn2g11740 Nelumbo nucifera HOM05D002997 ORTHO05D003021 1.8e-07 60.5 215 27.4
Oeu028166.1 Olea europaea HOM05D002997 ORTHO05D003021 1.8e-07 60.5 187 29.9
TAR624G0694 Trochodendron aralioides HOM05D002997 ORTHO05D003021 1.8e-07 60.5 204 33.3
RcHm_v2.0_Chr2g0090421 Rosa chinensis HOM05D002997 ORTHO05D003021 2.4e-07 60.1 202 30.7
MD15G1184700 Malus domestica HOM05D002997 ORTHO05D003021 3.1e-07 59.7 212 27.8
Nn8g39177 Nelumbo nucifera HOM05D002997 ORTHO05D003021 3.1e-07 59.7 202 24.3
Ah.14g082050 Amaranthus hybridus HOM05D002997 ORTHO05D003021 6.9e-07 58.5 211 29.9
Glyma.09G190800 Glycine max HOM05D002997 ORTHO05D003021 6.9e-07 58.5 226 28.8
Phvul.002G313100 Phaseolus vulgaris HOM05D002997 ORTHO05D003021 6.9e-07 58.5 206 29.6
Glyma.05G231000 Glycine max HOM05D002997 ORTHO05D003021 9.0e-07 58.2 208 27.9
FAN19G1659 Fragaria x ananassa HOM05D002997 ORTHO05D003021 1.2e-06 57.8 201 29.9
MBI01_g06513_MAGBIO Magnolia biondii HOM05D002997 ORTHO05D003021 1.2e-06 57.8 207 28.5
Manes.03G020800 Manihot esculenta HOM05D002997 ORTHO05D003021 1.5e-06 57.4 43 53.5
THA.LOC109116490 Tarenaya hassleriana HOM05D002997 ORTHO05D003021 1.5e-06 57.4 182 29.1
FvH4_1g04790 Fragaria vesca HOM05D002997 ORTHO05D003021 2.0e-06 57.0 201 29.4
Sabra18G0067900 Salix brachista HOM05D002997 ORTHO05D003021 2.0e-06 57.0 43 53.5
AL9U10630 Arabidopsis lyrata HOM05D013429 ORTHO05D003021 2.6e-06 56.6 195 29.2
CiPaw.02G150100 Carya illinoinensis HOM05D002997 ORTHO05D003021 2.6e-06 56.6 218 29.8
Cpa.g.sc23.107 Carica papaya HOM05D002997 ORTHO05D003021 3.4e-06 56.2 192 29.2
FAN28G0775 Fragaria x ananassa HOM05D002997 ORTHO05D003021 4.5e-06 55.8 202 27.2
CARHR218750 Cardamine hirsuta HOM05D013429 ORTHO05D003021 5.8e-06 55.5 191 30.9
Medtr8g103530 Medicago truncatula HOM05D002997 ORTHO05D003021 5.8e-06 55.5 190 26.8
Atru.chr7.1352 Acer truncatum HOM05D002997 ORTHO05D003021 7.6e-06 55.1 43 48.8
CiPaw.03G231900 Carya illinoinensis HOM05D002997 ORTHO05D003021 7.6e-06 55.1 223 27.4
FAN26G0466 Fragaria x ananassa HOM05D002997 ORTHO05D003021 7.6e-06 55.1 202 28.2
Lj4g0026369 Lotus japonicus HOM05D002997 ORTHO05D003021 9.9e-06 54.7 209 27.3
Nitab4.5_0000351g0070 Nicotiana tabacum HOM05D001537 ORTHO05D008612 9.9e-06 54.7 187 29.4
Potri.018G080001 Populus trichocarpa HOM05D002997 ORTHO05D003021 9.9e-06 54.7 232 27.6


User provided reference genes

Program Settings