Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G2079 Papaver somniferum HOM05D000368 ORTHO05D009348 7.0e-103 377.9 285 100.0
PSO063G1784 Papaver somniferum HOM05D000368 ORTHO05D009348 8.6e-101 370.9 285 96.1
Rhsim09G0197900 Rhododendron simsii HOM05D000368 ORTHO05D009348 1.8e-45 187.2 283 69.3
TAR629G3168 Trochodendron aralioides HOM05D000368 ORTHO05D009348 4.8e-43 179.1 294 66.0
Hund11743 Selenicereus undatus HOM05D000368 ORTHO05D009348 2.6e-41 173.3 288 66.3
Cc02_g02880 Coffea canephora HOM05D000368 ORTHO05D009348 7.7e-41 171.8 287 59.6
Dinv35216 Davidia involucrata HOM05D000368 ORTHO05D000289 2.2e-40 170.2 286 65.0
EL10Ac3g05631 Beta vulgaris HOM05D000368 ORTHO05D009348 5.0e-40 169.1 288 64.6
GSVIVG01028962001 Vitis vinifera HOM05D000368 ORTHO05D009348 4.2e-39 166.0 288 66.3
Ciclev10005579m.g Citrus clementina HOM05D000368 ORTHO05D009348 4.6e-38 162.5 289 67.1
Lsat_1_v5_gn_2_132381 Lactuca sativa HOM05D000368 ORTHO05D009348 6.1e-38 162.2 286 65.7
Eucgr.K00263 Eucalyptus grandis HOM05D000368 ORTHO05D009348 1.8e-37 160.6 286 64.3
Potri.015G144600 Populus trichocarpa HOM05D000368 ORTHO05D009348 3.0e-37 159.8 286 66.8
CiPaw.04G071400 Carya illinoinensis HOM05D000368 ORTHO05D009348 3.9e-37 159.5 286 65.0
PGSC0003DMG402014344 Solanum tuberosum HOM05D000368 ORTHO05D009348 3.3e-36 156.4 287 66.6
Ah.13g068650 Amaranthus hybridus HOM05D000368 ORTHO05D009348 5.7e-36 155.6 286 60.1
Solyc03g025740.4 Solanum lycopersicum HOM05D000368 ORTHO05D009348 5.7e-36 155.6 287 65.9
ECA238G2658 Erigeron canadensis HOM05D000368 ORTHO05D000289 7.4e-36 155.2 284 66.2
Sopen03g004560 Solanum pennellii HOM05D000368 ORTHO05D009348 9.7e-36 154.8 287 66.2
TWI39G0209 Tripterygium wilfordii HOM05D000368 ORTHO05D009348 1.7e-35 154.1 289 65.7
Sabra15G0154200 Salix brachista HOM05D000368 ORTHO05D009348 2.2e-35 153.7 289 66.4
Aqoxy5G04003 Aquilegia oxysepala HOM05D000368 ORTHO05D009348 4.8e-35 152.5 291 64.9
DCAR_020244 Daucus carota HOM05D000368 ORTHO05D009348 8.2e-35 151.8 245 70.6
PGR142G2510 Punica granatum HOM05D000368 ORTHO05D009348 8.2e-35 151.8 286 63.3
HanXRQChr07g0207001 Helianthus annuus HOM05D000368 ORTHO05D009348 1.8e-34 150.6 286 63.3
Lj5g0009535 Lotus japonicus HOM05D000368 ORTHO05D009348 2.4e-34 150.2 283 66.8
Nn1g01474 Nelumbo nucifera HOM05D000368 ORTHO05D009348 2.4e-34 150.2 294 67.0
CsaV3_3G017130 Cucumis sativus L. HOM05D000368 ORTHO05D009348 3.1e-34 149.8 284 66.2
Hma1.2p1_0270F.1_g107970 Hydrangea macrophylla HOM05D000368 ORTHO05D009348 4.1e-34 149.4 289 64.7
Sc19g0001470 Simmondsia chinensis HOM05D000368 ORTHO05D009348 4.1e-34 149.4 285 65.3
Cfa008323 Carpinus fangiana HOM05D000368 ORTHO05D009348 5.3e-34 149.1 284 62.3
ClCG05G008070 Citrullus lanatus HOM05D000368 ORTHO05D009348 6.9e-34 148.7 283 65.0
Sed0010584 Sechium edule HOM05D000368 ORTHO05D009348 6.9e-34 148.7 283 65.0
THA.LOC104811975 Tarenaya hassleriana HOM05D000368 ORTHO05D009348 2.0e-33 147.1 290 62.4
vmacro09836 Vaccinium macrocarpon HOM05D000368 ORTHO05D000289 3.4e-33 146.4 256 51.2
MELO3C006911.2 Cucumis melo HOM05D000368 ORTHO05D009348 4.5e-33 146.0 245 71.8
arahy.Tifrunner.gnm1.ann1.HM7G91 Arachis hypogaea HOM05D000368 ORTHO05D009348 5.9e-33 145.6 291 62.2
Manes.14G025600 Manihot esculenta HOM05D000368 ORTHO05D009348 5.9e-33 145.6 286 63.3
Prupe.2G295100 Prunus persica HOM05D000368 ORTHO05D009348 5.9e-33 145.6 287 55.4
Cpa.g.sc107.59 Carica papaya HOM05D000368 ORTHO05D009348 1.3e-32 144.4 283 62.9
AL8G26780 Arabidopsis lyrata HOM05D000368 ORTHO05D009348 2.2e-32 143.7 291 61.9
CANSAT21G1838 Cannabis sativa HOM05D000368 ORTHO05D009348 5.0e-32 142.5 260 67.7
Potri.012G141700 Populus trichocarpa HOM05D000368 ORTHO05D009348 5.0e-32 142.5 289 64.0
Carub.0008s1248 Capsella rubella HOM05D000368 ORTHO05D009348 6.5e-32 142.1 290 61.7
FAN06G1486 Fragaria x ananassa HOM05D000368 ORTHO05D009348 6.5e-32 142.1 287 54.7
FAN06G0492 Fragaria x ananassa HOM05D000368 ORTHO05D009348 8.5e-32 141.7 287 54.7
Lalb_Chr21g0305051 Lupinus albus HOM05D000368 ORTHO05D009348 8.5e-32 141.7 285 63.9
MD01G1201700 Malus domestica HOM05D000368 ORTHO05D009348 1.9e-31 140.6 286 58.7
VMungo0720G3173 Vigna mungo HOM05D000368 ORTHO05D009348 1.9e-31 140.6 282 58.2
AT5G52380 Arabidopsis thaliana HOM05D000368 ORTHO05D009348 2.5e-31 140.2 288 60.8
arahy.Tifrunner.gnm1.ann1.C4Z81U Arachis hypogaea HOM05D000368 ORTHO05D009348 3.2e-31 139.8 292 62.7
MSTRG.8734 Avicennia marina HOM05D000368 ORTHO05D009348 3.2e-31 139.8 282 64.5
SGA_v2.0_scaffold44G16725 Striga asiatica HOM05D000368 ORTHO05D009348 9.4e-31 138.3 290 59.3
Aa31LG3G8750 Aethionema arabicum HOM05D000368 ORTHO05D009348 1.6e-30 137.5 287 59.2
MD07G1269700 Malus domestica HOM05D000368 ORTHO05D009348 1.6e-30 137.5 285 54.7
MBI17_g19093_MAGBIO Magnolia biondii HOM05D000368 ORTHO05D009348 2.1e-30 137.1 308 51.3
CSS0042203 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 4.7e-30 136.0 150 68.7
Gohir.D12G258500 Gossypium hirsutum HOM05D000368 ORTHO05D009348 7.9e-30 135.2 286 54.5
RcHm_v2.0_Chr1g0377401 Rosa chinensis HOM05D000368 ORTHO05D009348 1.0e-29 134.8 286 53.5
Gorai.008G276900 Gossypium raimondii HOM05D000368 ORTHO05D009348 1.4e-29 134.4 285 54.4
Phvul.007G070700 Phaseolus vulgaris HOM05D000368 ORTHO05D009348 1.8e-29 134.0 242 62.8
QL09p014019 Quercus lobata HOM05D000368 ORTHO05D009348 2.3e-29 133.7 319 56.7
Haze_13700 Corylus avellana HOM05D000368 ORTHO05D009348 3.0e-29 133.3 267 62.9
CSS0028945 Camellia sinensis var. sinensis HOM05D000368 ORTHO05D009348 6.7e-29 132.1 150 70.7
TPR.G27005 Trifolium pratense HOM05D000368 ORTHO05D009348 6.7e-29 132.1 288 44.1
AUR62015971 Chenopodium quinoa HOM05D000368 ORTHO05D009348 5.7e-28 129.0 244 66.4
Ca_10757_v3 Cicer arietinum L. HOM05D000368 ORTHO05D009348 7.4e-28 128.6 285 37.2
CARHR265330 Cardamine hirsuta HOM05D000368 ORTHO05D009348 9.7e-28 128.3 287 57.5
Gohir.A12G257200 Gossypium hirsutum HOM05D000368 ORTHO05D009348 2.2e-27 127.1 286 53.8
Thecc.03G177600 Theobroma cacao HOM05D000368 ORTHO05D009348 8.2e-27 125.2 291 58.4
Nitab4.5_0002117g0050 Nicotiana tabacum HOM05D000368 ORTHO05D009348 1.8e-26 124.0 312 47.1
Actinidia31822 Actinidia chinensis HOM05D000368 ORTHO05D009348 2.4e-26 123.6 154 72.7
FAN10G1532 Fragaria x ananassa HOM05D000368 ORTHO05D009348 5.3e-26 122.5 288 54.5
FAN01G1188 Fragaria x ananassa HOM05D000368 ORTHO05D009348 7.0e-26 122.1 242 58.7
Psat0s3135g0040 Pisum sativum HOM05D000368 ORTHO05D009348 7.0e-26 122.1 286 55.9
Glyma.20G159100 Glycine max HOM05D000368 ORTHO05D009348 1.5e-25 120.9 288 55.9
Glyma.10G235200 Glycine max HOM05D000368 ORTHO05D009348 4.5e-25 119.4 287 55.1
Dinv28433 Davidia involucrata HOM05D000368 ORTHO05D009348 1.3e-24 117.9 127 69.3
Dinv24555 Davidia involucrata HOM05D000368 ORTHO05D009348 5.0e-24 115.9 104 65.4
FAN10G1519 Fragaria x ananassa HOM05D000368 ORTHO05D009348 1.4e-23 114.4 287 53.0
FvH4_7g29542 Fragaria vesca HOM05D000368 ORTHO05D009348 2.5e-23 113.6 157 50.3
Atru.BG.181.p Acer truncatum HOM05D000368 ORTHO05D009348 5.5e-23 112.5 101 67.3
Atru.chr1.452 Acer truncatum HOM05D000368 ORTHO05D009348 5.5e-23 112.5 101 67.3
Migut.F00336 Erythranthe guttata HOM05D000368 ORTHO05D009348 7.2e-23 112.1 286 58.7
Sp6g14600 Schrenkiella parvula HOM05D000368 ORTHO05D000289 7.2e-23 112.1 103 62.1
C03p18350 Brassica napus HOM05D000368 ORTHO05D000289 1.6e-22 110.9 103 62.1
Thhalv10014379m.g Eutrema salsugineum HOM05D000368 ORTHO05D009348 3.6e-22 109.8 288 59.0
A03p15700 Brassica napus HOM05D000368 ORTHO05D000289 5.2e-21 105.9 103 54.4
BolC3t14232H Brassica oleracea HOM05D000368 ORTHO05D000289 6.7e-21 105.5 103 60.2
BraA03t10861Z Brassica rapa HOM05D000368 ORTHO05D000289 1.5e-20 104.4 103 52.4
Duzib205G0377 Durio zibethinus HOM05D000368 ORTHO05D000289 3.3e-20 103.2 280 50.7
HPP92_006518 Vanilla planifolia HOM05D000368 ORTHO05D009348 3.7e-19 99.8 288 57.6
C09p41730 Brassica napus HOM05D000368 ORTHO05D000289 6.3e-19 99.0 102 55.9
BolC9t57061H Brassica oleracea HOM05D000368 ORTHO05D009348 6.3e-19 99.0 102 55.9
Zm00001eb074410 Zea mays HOM05D000368 ORTHO05D009348 6.3e-19 99.0 293 57.7
HPP92_018588 Vanilla planifolia HOM05D000368 ORTHO05D009348 1.4e-18 97.8 291 56.0
ATR0680G368 Amborella trichopoda HOM05D000368 ORTHO05D009348 4.1e-18 96.3 290 56.9
Os04g0555800 Oryza sativa ssp. japonica HOM05D000368 ORTHO05D009348 5.0e-16 89.4 103 52.4
Dinv24556 Davidia involucrata HOM05D000368 ORTHO05D009348 1.2e-12 78.2 142 69.0
Actinidia03122 Actinidia chinensis HOM05D000368 ORTHO05D009348 9.7e-12 75.1 102 50.0
AagrBONN_evm.TU.Sc2ySwM_117.528 Anthoceros agrestis HOM05D000368 ORTHO05D009348 2.4e-10 70.5 107 48.6
Mapoly0006s0064 Marchantia polymorpha HOM05D000368 ORTHO05D009348 2.7e-09 67.0 105 49.5
Nitab4.5_0001842g0090 Nicotiana tabacum HOM05D000368 ORTHO05D009348 2.7e-09 67.0 94 50.0
BraA10t43080Z Brassica rapa HOM05D000368 ORTHO05D009348 8.5e-08 62.0 43 62.8
SEGI_15321 Sequoiadendron giganteum HOM05D000368 ORTHO05D009348 5.5e-07 59.3 312 50.3
Pp3c16_20170 Physcomitrium patens HOM05D000368 ORTHO05D009348 9.4e-07 58.5 119 33.6
A10p09970 Brassica napus HOM05D000368 ORTHO05D009348 4.7e-06 56.2 249 25.3


User provided reference genes

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