Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1891 Papaver somniferum HOM05D004907 ORTHO05D005707 2.4e-234 815.1 394 100.0
PSO063G4965 Papaver somniferum HOM05D004907 ORTHO05D005707 4.4e-196 688.0 394 85.5
PSO170G6868 Papaver somniferum HOM05D004907 ORTHO05D005707 8.9e-173 610.5 387 76.5
PSO441G0001 Papaver somniferum HOM05D004907 ORTHO05D005707 8.9e-173 610.5 387 76.5
PSO144G0054 Papaver somniferum HOM05D004907 ORTHO05D005707 7.5e-172 607.4 389 76.9
PSO170G1656 Papaver somniferum HOM05D004907 ORTHO05D005707 1.1e-135 487.3 377 63.7
TAR374G1110 Trochodendron aralioides HOM05D004907 ORTHO05D005707 3.4e-116 422.5 378 54.8
Aqoxy3G02876 Aquilegia oxysepala HOM05D004907 ORTHO05D005707 1.1e-98 364.4 364 49.2
PSO478G2945 Papaver somniferum HOM05D004907 ORTHO05D005707 9.4e-98 361.3 190 88.9
Lsat_1_v5_gn_3_28580 Lactuca sativa HOM05D004907 ORTHO05D005707 1.6e-97 360.5 365 49.6
Hma1.2p1_0223F.1_g094330 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 4.4e-95 352.4 394 45.9
PGSC0003DMG400013488 Solanum tuberosum HOM05D004907 ORTHO05D005707 7.5e-95 351.7 370 47.8
CSS0001528 Camellia sinensis var. sinensis HOM05D004907 ORTHO05D005707 9.7e-95 351.3 371 48.2
Rhsim12G0042700 Rhododendron simsii HOM05D004907 ORTHO05D005707 2.2e-94 350.1 390 47.2
Lj6P808T27 Lonicera japonica HOM05D004907 ORTHO05D005707 4.8e-94 349.0 374 48.4
Nn4g22709 Nelumbo nucifera HOM05D004907 ORTHO05D005707 1.1e-93 347.8 379 48.3
Haze_12215 Corylus avellana HOM05D004907 ORTHO05D005707 1.4e-93 347.4 373 46.6
Sc04g0009300 Simmondsia chinensis HOM05D004907 ORTHO05D005707 1.8e-93 347.1 379 47.0
Cfa009181 Carpinus fangiana HOM05D004907 ORTHO05D005707 5.3e-93 345.5 379 45.9
Sopen05g001160 Solanum pennellii HOM05D004907 ORTHO05D005707 9.1e-93 344.7 368 47.6
Prupe.1G249900 Prunus persica HOM05D004907 ORTHO05D005707 1.2e-92 344.4 372 48.9
MD16G1096500 Malus domestica HOM05D004907 ORTHO05D005707 1.6e-92 344.0 359 48.7
Duzib268G1138 Durio zibethinus HOM05D004907 ORTHO05D005707 2.0e-92 343.6 383 46.7
CiPaw.05G186900 Carya illinoinensis HOM05D004907 ORTHO05D005707 5.9e-92 342.0 367 46.9
Hma1.2p1_0160F.1_g071120 Hydrangea macrophylla HOM05D004907 ORTHO05D005707 7.7e-92 341.7 371 46.4
AUR62014077 Chenopodium quinoa HOM05D004907 ORTHO05D005707 2.2e-91 340.1 373 45.8
CAN.G728.4 Capsicum annuum HOM05D004907 ORTHO05D005707 2.9e-91 339.7 370 45.4
PGR119G0630 Punica granatum HOM05D004907 ORTHO05D005707 2.9e-91 339.7 369 45.5
Nitab4.5_0015209g0010 Nicotiana tabacum HOM05D004907 ORTHO05D005707 5.0e-91 339.0 369 45.8
QL03p059196 Quercus lobata HOM05D004907 ORTHO05D005707 5.0e-91 339.0 370 45.1
Solyc05g005150.1 Solanum lycopersicum HOM05D004907 ORTHO05D005707 5.0e-91 339.0 368 46.5
DCAR_007072 Daucus carota HOM05D004907 ORTHO05D005707 1.1e-90 337.8 368 46.5
Nitab4.5_0000338g0040 Nicotiana tabacum HOM05D004907 ORTHO05D005707 5.5e-90 335.5 369 45.5
MD16G1096400 Malus domestica HOM05D004907 ORTHO05D005707 7.2e-90 335.1 368 46.7
MD13G1095300 Malus domestica HOM05D004907 ORTHO05D005707 1.2e-89 334.3 369 46.9
Thecc.02G254700 Theobroma cacao HOM05D004907 ORTHO05D005707 1.2e-89 334.3 386 45.6
Manes.13G027600 Manihot esculenta HOM05D004907 ORTHO05D005707 4.7e-89 332.4 379 44.9
Cfa009182 Carpinus fangiana HOM05D004907 ORTHO05D005707 6.8e-88 328.6 370 43.8
AUR62005416 Chenopodium quinoa HOM05D004907 ORTHO05D005707 1.2e-87 327.8 372 46.0
Duzib268G1696 Durio zibethinus HOM05D004907 ORTHO05D005707 9.8e-87 324.7 368 45.1
Lj4g0000696 Lotus japonicus HOM05D004907 ORTHO05D005707 2.8e-86 323.2 378 43.9
CiPaw.06G069900 Carya illinoinensis HOM05D004907 ORTHO05D005707 3.7e-86 322.8 387 44.4
Cc11_g15390 Coffea canephora HOM05D004907 ORTHO05D005707 3.7e-86 322.8 373 45.6
Lsat_1_v5_gn_8_154601 Lactuca sativa HOM05D004907 ORTHO05D005707 6.3e-86 322.0 354 44.4
Gohir.D01G149900 Gossypium hirsutum HOM05D004907 ORTHO05D005707 1.4e-85 320.9 376 43.6
Gohir.D02G160600 Gossypium hirsutum HOM05D004907 ORTHO05D005707 1.4e-85 320.9 372 46.5
Atru.chr11.2072 Acer truncatum HOM05D004907 ORTHO05D005707 7.0e-85 318.5 349 48.1
Oeu001729.1 Olea europaea HOM05D004907 ORTHO05D005707 9.1e-85 318.2 371 45.0
Gohir.A05G313700 Gossypium hirsutum HOM05D004907 ORTHO05D005707 2.7e-84 316.6 378 45.5
Gorai.002G186000 Gossypium raimondii HOM05D004907 ORTHO05D005707 3.5e-84 316.2 376 43.1
FAN12G3344 Fragaria x ananassa HOM05D004907 ORTHO05D005707 7.7e-84 315.1 376 44.9
CANSAT01G1025 Cannabis sativa HOM05D004907 ORTHO05D005707 2.3e-83 313.5 362 43.6
Glyma.02G036400 Glycine max HOM05D004907 ORTHO05D005707 2.3e-83 313.5 370 44.6
Glyma.08G284600 Glycine max HOM05D004907 ORTHO05D005707 2.9e-83 313.2 377 44.6
FvH4_4g32970 Fragaria vesca HOM05D004907 ORTHO05D005707 5.0e-83 312.4 376 44.4
RcHm_v2.0_Chr4g0441991 Rosa chinensis HOM05D004907 ORTHO05D005707 8.6e-83 311.6 372 44.1
Eucgr.H02548 Eucalyptus grandis HOM05D004907 ORTHO05D005707 1.5e-82 310.8 389 41.6
FAN07G1203 Fragaria x ananassa HOM05D004907 ORTHO05D005707 2.5e-82 310.1 369 44.7
HanXRQChr06g0173591 Helianthus annuus HOM05D004907 ORTHO05D005707 3.3e-82 309.7 389 43.4
Rhsim12G0113900 Rhododendron simsii HOM05D004907 ORTHO05D005707 4.2e-82 309.3 373 44.0
FAN22G1867 Fragaria x ananassa HOM05D004907 ORTHO05D005707 7.2e-82 308.5 363 44.9
Eucgr.H02549 Eucalyptus grandis HOM05D004907 ORTHO05D005707 9.5e-82 308.1 386 40.4
Ciclev10031561m.g Citrus clementina HOM05D004907 ORTHO05D005707 1.2e-81 307.8 381 42.5
Psat5g210760 Pisum sativum HOM05D004907 ORTHO05D005707 2.1e-81 307.0 364 44.5
FAN17G0584 Fragaria x ananassa HOM05D004907 ORTHO05D005707 2.8e-81 306.6 369 44.2
Lalb_Chr05g0216711 Lupinus albus HOM05D004907 ORTHO05D005707 3.6e-81 306.2 362 44.5
ClCG05G025500 Citrullus lanatus HOM05D004907 ORTHO05D005707 4.7e-81 305.8 380 41.1
Medtr8g069800 Medicago truncatula HOM05D004907 ORTHO05D005707 1.0e-80 304.7 369 43.1
Glyma.01G028800 Glycine max HOM05D004907 ORTHO05D005707 3.0e-80 303.1 372 43.8
Lj2g0022644 Lotus japonicus HOM05D004907 ORTHO05D005707 4.0e-80 302.8 375 43.5
Gohir.A03G137500 Gossypium hirsutum HOM05D004907 ORTHO05D005707 4.4e-79 299.3 372 43.8
MSTRG.7910 Avicennia marina HOM05D004907 ORTHO05D005707 5.7e-79 298.9 377 42.7
VMungo1215G1811 Vigna mungo HOM05D004907 ORTHO05D005707 5.7e-79 298.9 371 44.7
Phvul.003G062300 Phaseolus vulgaris HOM05D004907 ORTHO05D005707 7.5e-79 298.5 381 42.3
Glyma.18G141000 Glycine max HOM05D004907 ORTHO05D005707 1.3e-78 297.7 373 43.7
TPR.G24774 Trifolium pratense HOM05D004907 ORTHO05D005707 2.2e-78 297.0 369 42.3
Gohir.A01G160100 Gossypium hirsutum HOM05D004907 ORTHO05D005707 4.9e-78 295.8 311 46.6
Sabra10G0024600 Salix brachista HOM05D004907 ORTHO05D005707 4.9e-78 295.8 401 44.6
PSO357G0455 Papaver somniferum HOM05D004907 ORTHO05D005707 8.3e-78 295.0 222 62.6
Gorai.009G337200 Gossypium raimondii HOM05D004907 ORTHO05D005707 1.1e-77 294.7 378 43.7
Gorai.005G180700 Gossypium raimondii HOM05D004907 ORTHO05D005707 3.1e-77 293.1 372 43.8
CsaV3_5G031400 Cucumis sativus L. HOM05D004907 ORTHO05D005707 9.2e-77 291.6 389 39.3
Psat2g106360 Pisum sativum HOM05D004907 ORTHO05D005707 9.2e-77 291.6 370 43.0
MELO3C011980.2 Cucumis melo HOM05D004907 ORTHO05D005707 2.7e-76 290.0 384 39.6
THA.LOC104822976 Tarenaya hassleriana HOM05D004907 ORTHO05D005707 3.5e-76 289.7 374 44.7
Migut.L01466 Erythranthe guttata HOM05D004907 ORTHO05D005707 7.8e-76 288.5 378 41.3
Actinidia27794 Actinidia chinensis HOM05D004907 ORTHO05D005707 1.9e-74 283.9 371 41.0
Potri.010G042900 Populus trichocarpa HOM05D004907 ORTHO05D005707 1.2e-73 281.2 405 42.7
Ca_03137_v3 Cicer arietinum L. HOM05D004907 ORTHO05D005707 1.6e-73 280.8 362 41.4
CDE06G1150 Ceratophyllum demersum HOM05D004907 ORTHO05D005707 2.8e-73 280.0 341 41.6
MSTRG.2405 Avicennia marina HOM05D004907 ORTHO05D005707 3.6e-73 279.6 365 42.7
Dinv15270 Davidia involucrata HOM05D004907 ORTHO05D005707 1.2e-71 274.6 259 51.4
GSVIVG01013786001 Vitis vinifera HOM05D004907 ORTHO05D005707 2.0e-71 273.9 272 47.4
Medtr5g033880 Medicago truncatula HOM05D004907 ORTHO05D005707 2.6e-71 273.5 381 39.6
Medtr5g043750 Medicago truncatula HOM05D004907 ORTHO05D005707 9.8e-71 271.6 376 39.9
Ah.03g132850 Amaranthus hybridus HOM05D000168 ORTHO05D000811 2.9e-70 270.0 340 41.2
Oeu055460.1 Olea europaea HOM05D004907 ORTHO05D005707 4.9e-70 269.2 381 40.2
Sed0025966 Sechium edule HOM05D002061 ORTHO05D005707 4.9e-70 269.2 369 41.2
PGR102G3060 Punica granatum HOM05D004907 ORTHO05D005707 2.4e-69 266.9 382 39.3
TWI36G0219 Tripterygium wilfordii HOM05D004907 ORTHO05D005707 5.4e-69 265.8 373 41.3
Oeu056415.1 Olea europaea HOM05D004907 ORTHO05D005707 7.0e-69 265.4 376 38.6
Hund25371 Selenicereus undatus HOM05D004907 ORTHO05D005707 1.0e-67 261.5 368 38.9
Thecc.02G254800 Theobroma cacao HOM05D004907 ORTHO05D005707 1.3e-67 261.2 372 39.5
BraA09t39619Z Brassica rapa HOM05D004907 ORTHO05D005707 3.0e-67 260.0 374 40.6
Haze_12216 Corylus avellana HOM05D004907 ORTHO05D005707 3.9e-67 259.6 371 37.5
Thhalv10007835m.g Eutrema salsugineum HOM05D004907 ORTHO05D005707 3.9e-67 259.6 379 38.3
A09p41240 Brassica napus HOM05D004907 ORTHO05D005707 1.5e-66 257.7 376 40.4
Phvul.002G064500 Phaseolus vulgaris HOM05D004907 ORTHO05D005707 2.5e-66 256.9 248 52.8
SalBow3G2985 Salvia bowleyana HOM05D004907 ORTHO05D005707 2.5e-66 256.9 376 38.0
C05p22690 Brassica napus HOM05D004907 ORTHO05D005707 3.3e-66 256.5 373 39.9
BolC5t30967H Brassica oleracea HOM05D004907 ORTHO05D005707 3.3e-66 256.5 373 39.9
SalBow2G1155 Salvia bowleyana HOM05D004907 ORTHO05D005707 1.2e-65 254.6 369 37.9
Peaxi162Scf00158g00003 Petunia axillaris HOM05D004907 ORTHO05D005707 3.6e-65 253.1 270 44.4
BcaC05g26256 Brassica carinata HOM05D004907 ORTHO05D005707 6.2e-65 252.3 366 39.9
Sed0027759 Sechium edule HOM05D004907 ORTHO05D005707 5.2e-64 249.2 365 38.9
BcaB07g32334 Brassica carinata HOM05D004907 ORTHO05D005707 8.9e-64 248.4 378 38.9
Oeu056417.1 Olea europaea HOM05D004907 ORTHO05D005707 8.9e-64 248.4 377 37.1
Sp1g20830 Schrenkiella parvula HOM05D004907 ORTHO05D005707 2.6e-63 246.9 372 39.8
ATR1091G111 Amborella trichopoda HOM05D004907 ORTHO05D005707 4.4e-63 246.1 370 38.6
Aa31LG7G7420 Aethionema arabicum HOM05D004907 ORTHO05D005707 7.5e-63 245.4 375 38.7
AT1G23390 Arabidopsis thaliana HOM05D004907 ORTHO05D005707 9.8e-63 245.0 372 39.2
ClCG08G017860 Citrullus lanatus HOM05D002061 ORTHO05D005707 1.3e-62 244.6 394 39.8
AL1G37180 Arabidopsis lyrata HOM05D004907 ORTHO05D005707 4.9e-62 242.7 379 38.0
CARHR023830 Cardamine hirsuta HOM05D004907 ORTHO05D005707 8.3e-62 241.9 374 38.8
Oeu056728.1 Olea europaea HOM05D004907 ORTHO05D005707 1.4e-61 241.1 285 43.9
COL.COLO4_24215 Corchorus olitorius HOM05D004907 ORTHO05D005707 4.6e-60 236.1 270 46.3
Carub.0001s2297 Capsella rubella HOM05D004907 ORTHO05D005707 6.0e-60 235.7 378 38.6
EL10Ac6g13709 Beta vulgaris HOM05D004907 ORTHO05D005707 2.9e-54 216.9 225 48.4
Actinidia08149 Actinidia chinensis HOM05D004907 ORTHO05D005707 4.1e-53 213.0 268 44.0
Gohir.D05G315200 Gossypium hirsutum HOM05D004907 ORTHO05D005707 4.6e-52 209.5 235 49.4
Lalb_Chr09g0326261 Lupinus albus HOM05D004907 ORTHO05D005707 5.1e-51 206.1 372 33.6
SGA_v2.0_scaffold63G21708 Striga asiatica HOM05D004907 ORTHO05D005707 4.3e-50 203.0 375 35.7
Nn3g16812 Nelumbo nucifera HOM05D004907 ORTHO05D005707 9.9e-39 165.2 185 48.1
Zm00001eb155550 Zea mays HOM05D004907 ORTHO05D005707 6.2e-33 146.0 385 28.8
COL.COLO4_24217 Corchorus olitorius HOM05D004907 ORTHO05D005707 8.1e-33 145.6 209 37.8
MD13G1280300 Malus domestica HOM05D004907 ORTHO05D005707 2.9e-30 137.1 191 39.3
vmacro14766 Vaccinium macrocarpon HOM05D007853 ORTHO05D009873 3.2e-29 133.7 413 29.3
Os09g0292900 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 4.6e-28 129.8 343 30.9
HPP92_008048 Vanilla planifolia HOM05D004907 ORTHO05D005707 8.7e-27 125.6 334 30.2
Mapoly0119s0024 Marchantia polymorpha HOM05D007853 ORTHO05D009873 2.4e-24 117.5 364 27.2
CSS0040524 Camellia sinensis var. sinensis HOM05D007853 ORTHO05D009873 6.9e-24 115.9 367 28.1
Actinidia09494 Actinidia chinensis HOM05D007853 ORTHO05D009873 1.5e-23 114.8 398 27.9
BcaB06g26693 Brassica carinata HOM05D007853 ORTHO05D009873 2.0e-23 114.4 349 27.5
TWI18G0437 Tripterygium wilfordii HOM05D007853 ORTHO05D009873 2.0e-23 114.4 337 26.1
SEGI_08843 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 9.9e-23 112.1 410 25.9
BcaC06g35750 Brassica carinata HOM05D007853 ORTHO05D009873 1.7e-22 111.3 348 27.3
BolC7t41605H Brassica oleracea HOM05D007853 ORTHO05D009873 1.7e-22 111.3 348 27.3
Os02g0465600 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 1.7e-22 111.3 222 32.9
C07p11280 Brassica napus HOM05D007853 ORTHO05D009873 1.1e-21 108.6 348 27.0
Sp3g22500 Schrenkiella parvula HOM05D007853 ORTHO05D009873 1.4e-21 108.2 363 25.9
A07p07510 Brassica napus HOM05D007853 ORTHO05D009873 2.5e-21 107.5 348 25.9
BraA07t28542Z Brassica rapa HOM05D007853 ORTHO05D009873 2.5e-21 107.5 348 25.9
Prupe.8G204900 Prunus persica HOM05D007853 ORTHO05D009873 9.3e-21 105.5 339 26.5
MD05G1178400 Malus domestica HOM05D007853 ORTHO05D009873 1.2e-20 105.1 342 25.7
Medtr0197s0070 Medicago truncatula HOM05D007853 ORTHO05D009873 1.6e-20 104.8 372 26.3
Medtr7g059040 Medicago truncatula HOM05D007853 ORTHO05D009873 1.6e-20 104.8 372 26.3
TPR.G15291 Trifolium pratense HOM05D007853 ORTHO05D009873 1.6e-20 104.8 380 26.3
Pp3c2_14180 Physcomitrium patens HOM05D007853 ORTHO05D009873 2.7e-20 104.0 378 24.3
Ciclev10020523m.g Citrus clementina HOM05D007853 ORTHO05D009873 3.5e-20 103.6 385 25.2
Mapoly0119s0021 Marchantia polymorpha HOM05D007853 ORTHO05D009873 4.6e-20 103.2 337 24.9
CiPaw.03G151300 Carya illinoinensis HOM05D007853 ORTHO05D009873 7.9e-20 102.4 371 25.6
Cfa002555 Carpinus fangiana HOM05D007853 ORTHO05D009873 1.0e-19 102.1 370 25.7
VMungo1383G0232 Vigna mungo HOM05D007853 ORTHO05D009873 1.0e-19 102.1 381 27.0
Os01g0704300 Oryza sativa ssp. japonica HOM05D004907 ORTHO05D005707 3.9e-19 100.1 294 28.6
Phvul.008G123400 Phaseolus vulgaris HOM05D007853 ORTHO05D009873 5.1e-19 99.8 382 27.0
SEGI_02257 Sequoiadendron giganteum HOM05D007853 ORTHO05D009873 6.7e-19 99.4 353 25.2
Pp3c10_6380 Physcomitrium patens HOM05D007853 ORTHO05D009873 4.3e-18 96.7 347 24.2
Nn2g13937 Nelumbo nucifera HOM05D004907 ORTHO05D005707 1.6e-17 94.7 78 55.1
CARHR101120 Cardamine hirsuta HOM05D007853 ORTHO05D009873 3.7e-17 93.6 343 25.9
Cfa009183 Carpinus fangiana HOM05D004907 ORTHO05D005707 3.7e-17 93.6 128 35.9
TPR.G21504 Trifolium pratense HOM05D004907 ORTHO05D005707 3.7e-17 93.6 150 35.3
unitig_8.g2924 Utricularia gibba HOM05D004907 ORTHO05D005707 8.2e-17 92.4 117 45.3
Lj1g0009384 Lotus japonicus HOM05D007853 ORTHO05D009873 1.2e-15 88.6 352 23.9
Pp3c19_15800 Physcomitrium patens HOM05D007753 ORTHO05D009385 7.6e-15 85.9 374 25.1
Nn2g13938 Nelumbo nucifera HOM05D004907 ORTHO05D005707 1.0e-14 85.5 94 50.0
PGR044G1509 Punica granatum HOM05D007853 ORTHO05D009873 1.3e-14 85.1 362 25.1
unitig_8.g2923 Utricularia gibba HOM05D004907 ORTHO05D005707 2.3e-11 74.3 98 40.8
Pp3c22_13680 Physcomitrium patens HOM05D007753 ORTHO05D009385 4.8e-09 66.6 383 24.0
SEGI_08151 Sequoiadendron giganteum HOM05D002809 ORTHO05D009091 1.5e-07 61.6 277 23.1
Pp3c3_33090 Physcomitrium patens HOM05D030659 ORTHO05D009385 2.2e-06 57.8 379 21.6


User provided reference genes

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