Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1733 Papaver somniferum HOM05D003586 ORTHO05D004036 1.5e-133 479.6 245 100.0
PSO675G9104 Papaver somniferum HOM05D003586 ORTHO05D004036 1.6e-58 230.3 239 53.1
PSO732G0142 Papaver somniferum HOM05D003586 ORTHO05D004036 5.9e-58 228.4 241 53.5
Nn1g00886 Nelumbo nucifera HOM05D003586 ORTHO05D004036 3.0e-46 189.5 242 43.8
Aqoxy7G00839 Aquilegia oxysepala HOM05D003586 ORTHO05D004036 6.8e-46 188.3 237 44.3
MBI05_g26488_MAGBIO Magnolia biondii HOM05D003586 ORTHO05D004036 4.9e-44 182.2 240 42.9
Dinv06595 Davidia involucrata HOM05D003586 ORTHO05D004036 1.8e-43 180.3 236 44.1
TAR375G0563 Trochodendron aralioides HOM05D003586 ORTHO05D004036 2.7e-42 176.4 235 43.4
Ciclev10004122m.g Citrus clementina HOM05D003586 ORTHO05D004036 8.6e-41 171.4 231 43.3
Haze_22192 Corylus avellana HOM05D003586 ORTHO05D004036 5.6e-40 168.7 236 41.9
TWI23G0434 Tripterygium wilfordii HOM05D003586 ORTHO05D004036 1.1e-38 164.5 235 40.9
Prupe.2G273000 Prunus persica HOM05D003586 ORTHO05D004036 2.3e-38 163.3 236 41.9
Cfa013573 Carpinus fangiana HOM05D003586 ORTHO05D004036 6.8e-38 161.8 236 40.3
MD07G1249300 Malus domestica HOM05D003586 ORTHO05D004036 8.9e-38 161.4 236 41.1
FvH4_7g26990 Fragaria vesca HOM05D003586 ORTHO05D004036 2.6e-37 159.8 231 40.3
FAN06G4468 Fragaria x ananassa HOM05D003586 ORTHO05D004036 2.6e-37 159.8 231 40.3
Glyma.02G290200 Glycine max HOM05D003586 ORTHO05D004036 7.5e-37 158.3 228 42.5
Atru.chr1.904 Acer truncatum HOM05D003586 ORTHO05D004036 2.9e-36 156.4 230 42.6
RcHm_v2.0_Chr1g0373721 Rosa chinensis HOM05D003586 ORTHO05D004036 2.9e-36 156.4 233 39.9
Glyma.03G109700 Glycine max HOM05D003586 ORTHO05D004036 3.7e-36 156.0 228 42.1
LjContig00272g0012466 Lotus japonicus HOM05D003586 ORTHO05D004036 3.7e-36 156.0 229 40.2
vmacro06834 Vaccinium macrocarpon HOM05D003586 ORTHO05D004036 6.4e-36 155.2 239 39.7
Lalb_Chr04g0248471 Lupinus albus HOM05D003586 ORTHO05D004036 8.3e-36 154.8 229 41.0
Glyma.08G286950 Glycine max HOM05D003586 ORTHO05D004036 1.1e-35 154.5 228 41.7
arahy.Tifrunner.gnm1.ann1.DI5547 Arachis hypogaea HOM05D003586 ORTHO05D004036 1.4e-35 154.1 236 38.1
Thecc.03G149300 Theobroma cacao HOM05D003586 ORTHO05D004036 1.4e-35 154.1 244 41.0
Phvul.008G266400 Phaseolus vulgaris HOM05D003586 ORTHO05D004036 2.4e-35 153.3 228 41.2
Psat2g013320 Pisum sativum HOM05D003586 ORTHO05D004036 3.2e-35 152.9 228 38.6
Sed0010855 Sechium edule HOM05D003586 ORTHO05D004036 3.2e-35 152.9 230 39.6
Glyma.14G024600 Glycine max HOM05D003586 ORTHO05D004036 4.1e-35 152.5 228 41.2
Manes.14G038400 Manihot esculenta HOM05D003586 ORTHO05D004036 4.1e-35 152.5 236 39.8
CiPaw.07G185400 Carya illinoinensis HOM05D003586 ORTHO05D004036 7.0e-35 151.8 235 37.9
arahy.Tifrunner.gnm1.ann1.1899LM Arachis hypogaea HOM05D003586 ORTHO05D004036 9.2e-35 151.4 236 37.7
Gorai.001G050900 Gossypium raimondii HOM05D003586 ORTHO05D004036 1.6e-34 150.6 243 39.9
Gohir.A07G043301 Gossypium hirsutum HOM05D003586 ORTHO05D004036 2.7e-34 149.8 243 40.3
Potri.003G151500 Populus trichocarpa HOM05D003586 ORTHO05D004036 2.7e-34 149.8 233 41.6
CsaV3_4G004170 Cucumis sativus L. HOM05D003586 ORTHO05D004036 4.6e-34 149.1 231 38.5
Lj8C46T11 Lonicera japonica HOM05D003586 ORTHO05D004036 6.0e-34 148.7 236 39.8
Oeu060859.1 Olea europaea HOM05D003586 ORTHO05D004036 6.0e-34 148.7 235 35.3
Cc02_g04680 Coffea canephora HOM05D003586 ORTHO05D004036 1.0e-33 147.9 237 37.6
MELO3C017650.2 Cucumis melo HOM05D003586 ORTHO05D004036 1.3e-33 147.5 235 38.7
DCAR_027698 Daucus carota HOM05D003586 ORTHO05D004036 2.3e-33 146.7 236 39.0
Gohir.D07G047701 Gossypium hirsutum HOM05D003586 ORTHO05D004036 2.3e-33 146.7 243 39.1
Ca_26483_v3 Cicer arietinum L. HOM05D003586 ORTHO05D004036 6.6e-33 145.2 226 35.8
FAN10G2285 Fragaria x ananassa HOM05D003586 ORTHO05D004036 6.6e-33 145.2 249 36.9
FAN06G2502 Fragaria x ananassa HOM05D003586 ORTHO05D004036 1.5e-32 144.1 249 37.3
MSTRG.139 Avicennia marina HOM05D003586 ORTHO05D004036 1.9e-32 143.7 236 40.3
CSS0004894 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 1.9e-32 143.7 239 41.0
FAN01G1639 Fragaria x ananassa HOM05D003586 ORTHO05D004036 1.9e-32 143.7 249 37.3
Migut.O00372 Erythranthe guttata HOM05D003586 ORTHO05D004036 3.3e-32 142.9 252 36.9
FAN03G1177 Fragaria x ananassa HOM05D003586 ORTHO05D004036 4.3e-32 142.5 249 36.5
Eucgr.A02921 Eucalyptus grandis HOM05D003586 ORTHO05D004036 2.1e-31 140.2 228 37.3
CSS0040773 Camellia sinensis var. sinensis HOM05D003586 ORTHO05D004036 2.8e-31 139.8 239 39.7
Solyc03g093480.3 Solanum lycopersicum HOM05D003586 ORTHO05D004036 2.8e-31 139.8 236 37.7
HanXRQChr05g0139491 Helianthus annuus HOM05D003586 ORTHO05D004036 6.2e-31 138.7 229 39.7
Lsat_1_v5_gn_8_9561 Lactuca sativa HOM05D003586 ORTHO05D004036 1.1e-30 137.9 242 38.0
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 1.1e-30 137.9 228 36.4
QL09p028029 Quercus lobata HOM05D003586 ORTHO05D004036 1.4e-30 137.5 235 35.3
Rhsim03G0161600 Rhododendron simsii HOM05D003586 ORTHO05D004036 1.4e-30 137.5 205 39.0
ECA233G0107 Erigeron canadensis HOM05D003586 ORTHO05D004036 1.8e-30 137.1 226 39.4
Sopen03g024310 Solanum pennellii HOM05D003586 ORTHO05D004036 3.1e-30 136.3 236 37.7
ClCG07G016940 Citrullus lanatus HOM05D003586 ORTHO05D004036 6.8e-30 135.2 222 36.5
AUR62001342 Chenopodium quinoa HOM05D003586 ORTHO05D004036 1.2e-29 134.4 236 34.7
COL.COLO4_37344 Corchorus olitorius HOM05D003586 ORTHO05D004036 5.8e-29 132.1 252 39.7
Nitab4.5_0003173g0040 Nicotiana tabacum HOM05D003586 ORTHO05D004036 7.5e-29 131.7 237 39.2
PGR042G0622 Punica granatum HOM05D003586 ORTHO05D004036 7.5e-29 131.7 235 38.7
Sc20g0000680 Simmondsia chinensis HOM05D003586 ORTHO05D004036 7.5e-29 131.7 235 35.3
Peaxi162Scf00271g00727 Petunia axillaris HOM05D003586 ORTHO05D004036 9.9e-29 131.3 236 37.3
AUR62025663 Chenopodium quinoa HOM05D003586 ORTHO05D004036 1.3e-28 131.0 236 34.7
EL10Ac7g18161 Beta vulgaris HOM05D003586 ORTHO05D004036 2.9e-28 129.8 237 35.0
Sabra03G0109700 Salix brachista HOM05D003586 ORTHO05D004036 2.9e-28 129.8 219 37.4
Actinidia13607 Actinidia chinensis HOM05D003586 ORTHO05D004036 6.4e-28 128.6 168 45.2
Aa31LG5G17060 Aethionema arabicum HOM05D003586 ORTHO05D004036 6.4e-28 128.6 239 34.3
AT3G06530 Arabidopsis thaliana HOM05D003586 ORTHO05D004036 6.4e-28 128.6 239 35.6
GSVIVG01013976001 Vitis vinifera HOM05D003586 ORTHO05D004036 6.4e-28 128.6 236 34.7
Sp3g05470 Schrenkiella parvula HOM05D003586 ORTHO05D004036 3.2e-27 126.3 238 34.5
CAN.G485.20 Capsicum annuum HOM05D003586 ORTHO05D004036 5.4e-27 125.6 198 36.9
THA.LOC104811536 Tarenaya hassleriana HOM05D003586 ORTHO05D004036 5.4e-27 125.6 234 34.2
Thhalv10019871m.g Eutrema salsugineum HOM05D003586 ORTHO05D004036 7.1e-27 125.2 235 34.0
Medtr5g092370 Medicago truncatula HOM05D003586 ORTHO05D004036 1.6e-26 124.0 236 35.2
CDE04G1406 Ceratophyllum demersum HOM05D003586 ORTHO05D004036 2.1e-26 123.6 238 32.4
CARHR081080 Cardamine hirsuta HOM05D003586 ORTHO05D004036 2.7e-26 123.2 237 35.9
Carub.0003s0599 Capsella rubella HOM05D003586 ORTHO05D004036 3.5e-26 122.9 239 36.0
BolC3t16501H Brassica oleracea HOM05D003586 ORTHO05D004036 2.3e-25 120.2 239 33.1
AL3G17560 Arabidopsis lyrata HOM05D003586 ORTHO05D004036 3.0e-25 119.8 246 35.0
A05p41500 Brassica napus HOM05D003586 ORTHO05D004036 3.0e-25 119.8 239 32.2
BraA03t12653Z Brassica rapa HOM05D003586 ORTHO05D004036 3.0e-25 119.8 239 33.1
BraA05t22871Z Brassica rapa HOM05D003586 ORTHO05D004036 3.0e-25 119.8 239 32.2
A03p34730 Brassica napus HOM05D003586 ORTHO05D004036 8.6e-25 118.2 239 33.1
C03p42210 Brassica napus HOM05D003586 ORTHO05D004036 8.6e-25 118.2 239 32.6
Ah.08g217720 Amaranthus hybridus HOM05D003586 ORTHO05D004036 1.1e-24 117.9 236 31.8
SalBow2G0990 Salvia bowleyana HOM05D003586 ORTHO05D004036 3.3e-24 116.3 237 36.3
SGA_v2.0_scaffold56G19917 Striga asiatica HOM05D003586 ORTHO05D004036 1.2e-23 114.4 234 32.1
Hund18595 Selenicereus undatus HOM05D003586 ORTHO05D004036 3.6e-23 112.8 236 32.6
Zm00001eb123540 Zea mays HOM05D003586 ORTHO05D004036 4.7e-23 112.5 239 33.9
Nitab4.5_0005495g0020 Nicotiana tabacum HOM05D003586 ORTHO05D004036 1.4e-22 110.9 278 31.7
C05p60700 Brassica napus HOM05D003586 ORTHO05D004036 1.8e-22 110.5 238 32.4
BolC5t34730H Brassica oleracea HOM05D003586 ORTHO05D004036 1.8e-22 110.5 238 32.4
ATR0057G101 Amborella trichopoda HOM05D003586 ORTHO05D004036 1.2e-18 97.8 223 33.2
Cpa.g.sc13.260 Carica papaya HOM05D003586 ORTHO05D004036 1.7e-17 94.0 238 32.4
HPP92_014907 Vanilla planifolia HOM05D003586 ORTHO05D004036 3.9e-17 92.8 261 29.1
HPP92_014933 Vanilla planifolia HOM05D003586 ORTHO05D004036 5.6e-16 89.0 195 33.8
unitig_62.g23920 Utricularia gibba HOM05D003586 ORTHO05D004036 1.6e-15 87.4 250 30.0
CANSAT56G2655 Cannabis sativa HOM05D003586 ORTHO05D004036 6.0e-10 68.9 89 48.3
SHI14045 Sapria himalayana HOM05D003586 ORTHO05D004036 3.0e-09 66.6 211 24.2
Duzib205G0263 Durio zibethinus HOM05D003586 ORTHO05D004036 9.6e-08 61.6 66 51.5
Rhsim03G0111100 Rhododendron simsii HOM05D003586 ORTHO05D004036 4.8e-07 59.3 58 55.2


User provided reference genes

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