Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G1438 Papaver somniferum HOM05D000880 ORTHO05D004760 0.0e+00 1239.6 679 100.0
PSO478G4138 Papaver somniferum HOM05D000880 ORTHO05D004760 2.8e-214 749.2 464 88.6
PSO675G6830 Papaver somniferum HOM05D000880 ORTHO05D004760 1.6e-201 706.8 913 51.6
PSO541G5609 Papaver somniferum HOM05D000880 ORTHO05D004760 2.7e-201 706.1 916 52.1
PSO541G3373 Papaver somniferum HOM05D000880 ORTHO05D004760 9.4e-154 548.1 421 72.9
Dinv33059 Davidia involucrata HOM05D000880 ORTHO05D004760 2.5e-114 417.2 881 36.8
CSS0022271 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D004760 1.4e-112 411.4 847 37.4
Nn3g21505 Nelumbo nucifera HOM05D000880 ORTHO05D004760 4.4e-111 406.4 850 37.2
TAR362G0476 Trochodendron aralioides HOM05D000880 ORTHO05D004760 1.8e-109 401.0 889 36.6
Manes.01G219900 Manihot esculenta HOM05D000880 ORTHO05D004760 4.6e-108 396.4 859 35.6
CSS0046847 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D004760 5.9e-108 396.0 880 35.8
GSVIVG01028028001 Vitis vinifera HOM05D000880 ORTHO05D004760 1.0e-107 395.2 873 36.1
Lj2A1196T50 Lonicera japonica HOM05D000880 ORTHO05D004760 5.6e-106 389.4 879 34.8
Aqoxy2G02932 Aquilegia oxysepala HOM05D000880 ORTHO05D004760 1.6e-105 387.9 872 35.1
CiPaw.07G109900 Carya illinoinensis HOM05D000880 ORTHO05D004760 6.8e-104 382.5 873 36.2
Actinidia26752 Actinidia chinensis HOM05D000880 ORTHO05D004760 1.4e-101 374.8 497 47.9
SGA_v2.0_scaffold24G10608 Striga asiatica HOM05D000880 ORTHO05D004760 1.4e-101 374.8 480 47.3
QL12p028379 Quercus lobata HOM05D000880 ORTHO05D004760 1.9e-101 374.4 882 35.8
Hma1.2p1_0494F.1_g165220 Hydrangea macrophylla HOM05D000880 ORTHO05D004760 1.6e-100 371.3 877 33.9
Hma1.2p1_1471F.1_g285620 Hydrangea macrophylla HOM05D000880 ORTHO05D004760 2.0e-100 370.9 494 47.2
Ciclev10027776m.g Citrus clementina HOM05D000880 ORTHO05D004760 4.3e-98 363.2 871 34.9
TWI14G0456 Tripterygium wilfordii HOM05D000880 ORTHO05D004760 2.1e-97 360.9 499 47.3
CAN.G125.1 Capsicum annuum HOM05D000880 ORTHO05D004760 1.4e-96 358.2 472 48.1
vmacro15153 Vaccinium macrocarpon HOM05D000880 ORTHO05D004760 2.3e-96 357.5 835 34.1
Potri.014G128300 Populus trichocarpa HOM05D000880 ORTHO05D004760 3.1e-96 357.1 859 32.9
arahy.Tifrunner.gnm1.ann1.DCE7TU Arachis hypogaea HOM05D000880 ORTHO05D004760 4.0e-96 356.7 475 47.2
Oeu000551.1 Olea europaea HOM05D000880 ORTHO05D004760 4.0e-96 356.7 867 33.2
Nitab4.5_0002995g0010 Nicotiana tabacum HOM05D000880 ORTHO05D004760 1.2e-95 355.1 869 33.5
Glyma.03G214900 Glycine max HOM05D000880 ORTHO05D004760 2.6e-95 354.0 478 47.3
Migut.C01322 Erythranthe guttata HOM05D000880 ORTHO05D004760 7.5e-95 352.4 486 46.5
Atru.chr3.2809 Acer truncatum HOM05D000880 ORTHO05D004760 2.2e-94 350.9 472 47.9
arahy.Tifrunner.gnm1.ann1.FAXC2W Arachis hypogaea HOM05D000880 ORTHO05D004760 3.7e-94 350.1 480 46.5
Phvul.001G207700 Phaseolus vulgaris HOM05D000880 ORTHO05D004760 3.7e-94 350.1 474 47.0
Cc01_g20920 Coffea canephora HOM05D000880 ORTHO05D004760 8.3e-94 349.0 862 33.6
MELO3C015997.2 Cucumis melo HOM05D000880 ORTHO05D004760 8.3e-94 349.0 482 46.9
CARHR250590 Cardamine hirsuta HOM05D000880 ORTHO05D004760 1.9e-93 347.8 462 47.4
Rhsim01G0285600 Rhododendron simsii HOM05D000880 ORTHO05D004760 1.9e-93 347.8 755 37.2
Hund25319 Selenicereus undatus HOM05D000880 ORTHO05D004760 2.4e-93 347.4 862 33.4
PGSC0003DMG400023908 Solanum tuberosum HOM05D000880 ORTHO05D004760 3.2e-93 347.1 481 46.6
Duzib138G0681 Durio zibethinus HOM05D000880 ORTHO05D004760 4.1e-93 346.7 856 33.4
Haze_04946 Corylus avellana HOM05D000880 ORTHO05D004760 7.1e-93 345.9 814 34.6
Lalb_Chr18g0046951 Lupinus albus HOM05D000880 ORTHO05D004760 9.2e-93 345.5 479 46.6
PGR044G0963 Punica granatum HOM05D000880 ORTHO05D004760 9.2e-93 345.5 882 32.7
Solyc09g005760.3 Solanum lycopersicum HOM05D000880 ORTHO05D004760 9.2e-93 345.5 481 46.4
CANSAT25G3354 Cannabis sativa HOM05D000880 ORTHO05D004760 1.6e-92 344.7 594 42.6
SalBow7G4572 Salvia bowleyana HOM05D000880 ORTHO05D004760 2.7e-92 344.0 482 45.6
Sed0027832 Sechium edule HOM05D000880 ORTHO05D004760 2.7e-92 344.0 485 47.2
Sp6g02280 Schrenkiella parvula HOM05D000880 ORTHO05D004760 6.0e-92 342.8 470 47.9
Thecc.01G301500 Theobroma cacao HOM05D000880 ORTHO05D004760 6.0e-92 342.8 883 33.3
CsaV3_7G029310 Cucumis sativus L. HOM05D000880 ORTHO05D004760 1.0e-91 342.0 621 39.1
PSO210G4167 Papaver somniferum HOM05D000880 ORTHO05D004760 1.0e-91 342.0 323 63.5
Potri.002G203700 Populus trichocarpa HOM05D000880 ORTHO05D004760 3.0e-91 340.5 859 32.7
SalBow5G3782 Salvia bowleyana HOM05D000880 ORTHO05D004760 6.6e-91 339.3 491 44.8
Gorai.008G144800 Gossypium raimondii HOM05D000880 ORTHO05D004760 8.6e-91 339.0 468 46.4
AL6G50720 Arabidopsis lyrata HOM05D000880 ORTHO05D004760 1.1e-90 338.6 467 47.5
MSTRG.25483 Avicennia marina HOM05D000880 ORTHO05D004760 1.1e-90 338.6 482 46.7
Glyma.19G211500 Glycine max HOM05D000880 ORTHO05D004760 1.5e-90 338.2 479 47.0
Gohir.D12G133800 Gossypium hirsutum HOM05D000880 ORTHO05D004760 1.5e-90 338.2 468 46.2
Aa31LG5G2040 Aethionema arabicum HOM05D000880 ORTHO05D004760 1.9e-90 337.8 863 32.6
Ah.07g202710 Amaranthus hybridus HOM05D000880 ORTHO05D004760 1.9e-90 337.8 483 44.5
ClCG09G005830 Citrullus lanatus HOM05D000880 ORTHO05D004760 2.5e-90 337.4 617 40.7
MD11G1308900 Malus domestica HOM05D000880 ORTHO05D004760 3.3e-90 337.0 498 47.4
Sopen09g001650 Solanum pennellii HOM05D000880 ORTHO05D004760 4.3e-90 336.7 500 45.4
Sed0021307 Sechium edule HOM05D000880 ORTHO05D004760 7.3e-90 335.9 621 40.6
AUR62026599 Chenopodium quinoa HOM05D000880 ORTHO05D004760 2.1e-89 334.3 861 33.4
Sc04g0008900 Simmondsia chinensis HOM05D000880 ORTHO05D004760 6.2e-89 332.8 487 45.6
Lj1g0000333 Lotus japonicus HOM05D000880 ORTHO05D004760 1.4e-88 331.6 470 46.2
THA.LOC104801276 Tarenaya hassleriana HOM05D000880 ORTHO05D004760 1.4e-88 331.6 588 40.5
Peaxi162Scf00039g00620 Petunia axillaris HOM05D000880 ORTHO05D004760 1.8e-88 331.3 567 41.3
CDE05G0797 Ceratophyllum demersum HOM05D000880 ORTHO05D004760 4.0e-88 330.1 739 34.5
Gohir.A12G130000 Gossypium hirsutum HOM05D000880 ORTHO05D004760 8.9e-88 328.9 862 33.1
Eucgr.K03490 Eucalyptus grandis HOM05D000880 ORTHO05D004760 2.0e-87 327.8 867 33.2
Carub.0006s3476 Capsella rubella HOM05D000880 ORTHO05D004760 2.6e-87 327.4 850 32.7
Cpa.g.sc229.11 Carica papaya HOM05D000880 ORTHO05D004760 1.7e-86 324.7 654 39.3
AT4G02400 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 2.9e-86 323.9 850 31.8
MD03G1289000 Malus domestica HOM05D000880 ORTHO05D004760 2.9e-86 323.9 875 34.2
DCAR_015239 Daucus carota HOM05D000880 ORTHO05D004760 6.4e-86 322.8 807 33.3
Cfa005904 Carpinus fangiana HOM05D000880 ORTHO05D004760 1.1e-85 322.0 886 32.6
Sabra02G0155400 Salix brachista HOM05D000880 ORTHO05D004760 1.1e-85 322.0 861 32.2
HPP92_011847 Vanilla planifolia HOM05D000880 ORTHO05D004760 1.4e-85 321.6 820 32.3
Psat3g021720 Pisum sativum HOM05D000880 ORTHO05D004760 2.1e-84 317.8 481 42.4
Rhsim11G0035900 Rhododendron simsii HOM05D000880 ORTHO05D004760 2.7e-84 317.4 790 33.7
BcaC03g16120 Brassica carinata HOM05D000880 ORTHO05D004760 6.0e-84 316.2 466 42.5
Zm00001eb016440 Zea mays HOM05D000880 ORTHO05D004760 7.8e-84 315.8 482 44.0
BolC2t09905H Brassica oleracea HOM05D000880 ORTHO05D004760 1.7e-83 314.7 469 42.4
Thhalv10028424m.g Eutrema salsugineum HOM05D000880 ORTHO05D004760 3.9e-83 313.5 463 44.3
A02p24660 Brassica napus HOM05D000880 ORTHO05D004760 5.1e-83 313.2 469 42.4
BraA02t07457Z Brassica rapa HOM05D000880 ORTHO05D004760 8.6e-83 312.4 479 41.8
EL10Ac9g22871 Beta vulgaris HOM05D000880 ORTHO05D004760 3.3e-82 310.5 513 41.1
Os03g0343300 Oryza sativa ssp. japonica HOM05D000880 ORTHO05D004760 4.3e-82 310.1 453 45.0
Lsat_1_v5_gn_5_191521 Lactuca sativa HOM05D000880 ORTHO05D004760 5.6e-82 309.7 454 44.1
unitig_747.g21560 Utricularia gibba HOM05D000880 ORTHO05D004760 1.6e-81 308.1 468 44.7
BcaB05g23626 Brassica carinata HOM05D000880 ORTHO05D004760 1.1e-80 305.4 467 41.8
C02p38920 Brassica napus HOM05D000880 ORTHO05D004760 5.2e-80 303.1 469 41.8
Medtr7g108730 Medicago truncatula HOM05D000880 ORTHO05D004760 6.8e-80 302.8 484 42.1
AL6G19330 Arabidopsis lyrata HOM05D000880 ORTHO05D004760 9.9e-79 298.9 443 44.0
FAN27G2693 Fragaria x ananassa HOM05D000880 ORTHO05D004760 3.8e-78 297.0 860 32.4
Ca_09177_v3 Cicer arietinum L. HOM05D000880 ORTHO05D004760 3.2e-77 293.9 612 36.6
FAN24G3174 Fragaria x ananassa HOM05D000880 ORTHO05D007053 7.1e-77 292.7 492 41.9
ATR0100G058 Amborella trichopoda HOM05D000880 ORTHO05D004760 6.6e-75 286.2 548 39.4
AUR62005314 Chenopodium quinoa HOM05D000880 ORTHO05D004760 8.7e-75 285.8 855 30.4
FAN20G0148 Fragaria x ananassa HOM05D000880 ORTHO05D007053 5.6e-74 283.1 639 37.7
Medtr3g113240 Medicago truncatula HOM05D000880 ORTHO05D004760 7.3e-74 282.7 433 43.9
FAN15G1023 Fragaria x ananassa HOM05D000880 ORTHO05D007053 2.1e-73 281.2 849 31.8
AT5G08600 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 3.6e-73 280.4 442 41.2
TPR.G9606 Trifolium pratense HOM05D000880 ORTHO05D004760 6.2e-73 279.6 615 36.7
Carub.0006s0757 Capsella rubella HOM05D000880 ORTHO05D004760 5.8e-71 273.1 569 37.4
FvH4_2g25830 Fragaria vesca HOM05D000880 ORTHO05D004760 7.6e-71 272.7 441 42.9
ECA248G0121 Erigeron canadensis HOM05D000880 ORTHO05D004760 4.9e-70 270.0 512 35.5
Thhalv10015339m.g Eutrema salsugineum HOM05D000880 ORTHO05D004760 1.1e-69 268.9 443 41.8
RcHm_v2.0_Chr6g0294141 Rosa chinensis HOM05D000880 ORTHO05D004760 2.4e-69 267.7 880 30.8
COL.COLO4_23336 Corchorus olitorius HOM05D000880 ORTHO05D004760 9.3e-69 265.8 800 32.5
HanXRQChr01g0001311 Helianthus annuus HOM05D000880 ORTHO05D004760 1.3e-67 261.9 843 30.0
MSTRG.25474 Avicennia marina HOM05D000880 ORTHO05D004760 1.4e-64 251.9 242 55.4
A09p01860 Brassica napus HOM05D000880 ORTHO05D004760 3.1e-64 250.8 466 40.3
BcaNung04048 Brassica carinata HOM05D000880 ORTHO05D004760 2.6e-63 247.7 449 40.5
BcaB01g02051 Brassica carinata HOM05D000880 ORTHO05D004760 3.8e-62 243.8 448 39.3
VMungo1383G0715 Vigna mungo HOM05D000880 ORTHO05D004760 3.2e-61 240.7 203 61.6
Nitab4.5_0004207g0040 Nicotiana tabacum HOM05D000880 ORTHO05D004760 4.8e-57 226.9 902 27.2
C09p01900 Brassica napus HOM05D000880 ORTHO05D004760 1.3e-54 218.8 626 31.9
BolC9t53125H Brassica oleracea HOM05D000880 ORTHO05D004760 1.3e-54 218.8 626 31.9
Nitab4.5_0007049g0030 Nicotiana tabacum HOM05D000880 ORTHO05D004760 2.9e-54 217.6 352 42.6
Oeu028138.2 Olea europaea HOM05D000880 ORTHO05D004760 3.1e-48 197.6 355 42.3
SEGI_18392 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 5.9e-47 193.4 592 30.2
Medtr7g091790 Medicago truncatula HOM05D000880 ORTHO05D004760 1.9e-45 188.3 681 28.5
Oeu000538.1 Olea europaea HOM05D000880 ORTHO05D004760 3.1e-40 171.0 449 32.7
SMO146G0364 Selaginella moellendorffii HOM05D000880 ORTHO05D004760 4.5e-39 167.2 705 27.7
Mapoly0012s0035 Marchantia polymorpha HOM05D000880 ORTHO05D004760 1.0e-38 166.0 623 27.9
CAN.G1465.7 Capsicum annuum HOM05D000880 ORTHO05D004760 1.3e-38 165.6 168 53.0
SEGI_30897 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 1.1e-34 152.5 161 48.4
BcaC06g34728 Brassica carinata HOM05D000880 ORTHO05D004760 2.5e-34 151.4 298 37.6
SEGI_12067 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 5.7e-34 150.2 275 36.0
CBR_g19437 Chara braunii HOM05D000880 ORTHO05D004760 1.7e-33 148.7 211 41.7
BcaC08g44566 Brassica carinata HOM05D000880 ORTHO05D004760 3.7e-33 147.5 293 36.9
C02p30160 Brassica napus HOM05D000880 ORTHO05D004760 2.4e-32 144.8 304 36.8
BcaC07g42028 Brassica carinata HOM05D000880 ORTHO05D004760 6.9e-32 143.3 320 35.9
Pp3c9_17240 Physcomitrium patens HOM05D000880 ORTHO05D004760 2.6e-31 141.4 561 27.3
C08p50820 Brassica napus HOM05D000880 ORTHO05D004760 5.9e-31 140.2 293 36.9
BolC4t25292H Brassica oleracea HOM05D000880 ORTHO05D004760 3.6e-28 131.0 300 35.0
Atru.chr5.2474 Acer truncatum HOM05D000880 ORTHO05D004760 6.1e-28 130.2 166 51.2
BcaC02g09729 Brassica carinata HOM05D000880 ORTHO05D004760 3.9e-27 127.5 300 34.7
SMO146G0006 Selaginella moellendorffii HOM05D000880 ORTHO05D004760 8.8e-27 126.3 243 37.9
MBI19_g43564_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D004760 5.7e-26 123.6 141 51.8
AagrBONN_evm.TU.Sc2ySwM_117.3282 Anthoceros agrestis HOM05D000880 ORTHO05D004760 9.7e-26 122.9 609 27.6
Cre11.g478950 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D004760 4.8e-25 120.6 191 38.2
Cre11.g478966 Chlamydomonas reinhardtii HOM05D000880 ORTHO05D004760 4.8e-25 120.6 191 38.2
A04p15040 Brassica napus HOM05D000880 ORTHO05D004760 5.3e-24 117.1 288 34.0
Prupe.8G262300 Prunus persica HOM05D000880 ORTHO05D004760 1.2e-23 115.9 561 27.5
BraA04t17148Z Brassica rapa HOM05D000880 ORTHO05D004760 2.0e-23 115.2 287 33.4
VMungo1383G0181 Vigna mungo HOM05D000880 ORTHO05D004760 5.9e-23 113.6 153 49.0
PGR003G0015 Punica granatum HOM05D000880 ORTHO05D004760 1.7e-22 112.1 135 51.1
BcaC03g15404 Brassica carinata HOM05D000880 ORTHO05D001048 7.2e-21 106.7 244 34.8
MCO13G364 Micromonas commoda HOM05D000880 ORTHO05D004760 7.2e-21 106.7 553 24.8
A09p11280 Brassica napus HOM05D000880 ORTHO05D004760 2.0e-18 98.6 281 32.4
A04p00500 Brassica napus HOM05D000880 ORTHO05D004760 2.2e-17 95.1 281 31.7
Cfa026849 Carpinus fangiana HOM05D000880 ORTHO05D004760 6.3e-17 93.6 485 25.8
TAR633G1122 Trochodendron aralioides HOM05D000880 ORTHO05D004760 4.1e-16 90.9 344 29.1
BolC8t52610H Brassica oleracea HOM05D000880 ORTHO05D004760 5.0e-14 84.0 161 36.6
CAN.G1465.8 Capsicum annuum HOM05D000880 ORTHO05D004760 2.1e-12 78.6 82 53.7
PRCOL_00002788 Prasinoderma coloniale HOM05D000880 ORTHO05D004760 2.3e-11 75.1 482 25.1
A10p23840 Brassica napus HOM05D000880 ORTHO05D004760 3.0e-11 74.7 89 43.8
MBI19_g43566_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D244402 6.8e-11 73.6 74 50.0
C07p40760 Brassica napus HOM05D000880 ORTHO05D004760 4.4e-10 70.9 81 43.2
Gorai.008G145900 Gossypium raimondii HOM05D000880 ORTHO05D004760 1.3e-09 69.3 85 44.7
Gohir.A12G131050 Gossypium hirsutum HOM05D000880 ORTHO05D004760 2.8e-09 68.2 82 46.3
Gohir.D12G134950 Gossypium hirsutum HOM05D000880 ORTHO05D004760 4.8e-09 67.4 82 46.3
CAN.G619.12 Capsicum annuum HOM05D000880 ORTHO05D004760 1.1e-08 66.2 79 45.6
SEGI_39037 Sequoiadendron giganteum HOM05D000880 ORTHO05D004760 3.1e-08 64.7 90 45.6
CAN.G1015.4 Capsicum annuum HOM05D004625 ORTHO05D006054 7.0e-08 63.5 139 33.1
AT5G36980 Arabidopsis thaliana HOM05D000880 ORTHO05D004760 2.7e-07 61.6 120 35.8


User provided reference genes

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