Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO782G0783 Papaver somniferum HOM05D007428 ORTHO05D009308 2.2e-51 205.3 100 100.0
PSO478G2995 Papaver somniferum HOM05D007428 ORTHO05D009308 1.9e-47 192.2 100 95.0
MBI11_g02029_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 3.2e-34 148.3 100 77.0
ATR0661G028 Amborella trichopoda HOM05D007428 ORTHO05D009308 5.4e-34 147.5 99 75.8
Nn1g01671 Nelumbo nucifera HOM05D007428 ORTHO05D009308 6.0e-33 144.1 100 74.0
Manes.02G017900 Manihot esculenta HOM05D007428 ORTHO05D009308 1.7e-32 142.5 94 76.6
Dinv38899 Davidia involucrata HOM05D007428 ORTHO05D009308 6.6e-32 140.6 96 74.0
TAR374G0673 Trochodendron aralioides HOM05D007428 ORTHO05D009308 1.5e-31 139.4 100 72.0
Actinidia10608 Actinidia chinensis HOM05D007428 ORTHO05D009308 2.5e-31 138.7 94 74.5
Ciclev10023047m.g Citrus clementina HOM05D007428 ORTHO05D009308 1.6e-30 136.0 96 71.9
GSVIVG01019416001 Vitis vinifera HOM05D007428 ORTHO05D009308 2.8e-30 135.2 96 70.8
Peaxi162Scf00102g01635 Petunia axillaris HOM05D007428 ORTHO05D009308 3.6e-30 134.8 94 71.3
Potri.001G099200 Populus trichocarpa HOM05D007428 ORTHO05D009308 4.8e-30 134.4 94 72.3
CANSAT21G2180 Cannabis sativa HOM05D007428 ORTHO05D009308 1.1e-29 133.3 102 69.6
Prupe.5G106400 Prunus persica HOM05D007428 ORTHO05D009308 1.1e-29 133.3 99 69.7
CiPaw.11G129900 Carya illinoinensis HOM05D007428 ORTHO05D009308 1.8e-29 132.5 94 72.3
FAN04G2816 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.8e-29 132.5 99 70.7
FAN13G2357 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.8e-29 132.5 99 70.7
FAN18G4254 Fragaria x ananassa HOM05D007428 ORTHO05D009308 1.8e-29 132.5 99 70.7
Atru.chr9.2117 Acer truncatum HOM05D007428 ORTHO05D009308 4.0e-29 131.3 94 72.3
AUR62000169 Chenopodium quinoa HOM05D007428 ORTHO05D009308 4.0e-29 131.3 94 70.2
Sabra01G0074400 Salix brachista HOM05D007428 ORTHO05D009308 4.0e-29 131.3 94 71.3
THA.LOC104809367 Tarenaya hassleriana HOM05D007428 ORTHO05D009308 4.0e-29 131.3 98 68.4
Aqoxy7G00179 Aquilegia oxysepala HOM05D007428 ORTHO05D009308 6.9e-29 130.6 97 67.0
BcaB06g27627 Brassica carinata HOM05D007428 ORTHO05D009308 6.9e-29 130.6 94 70.2
AUR62039842 Chenopodium quinoa HOM05D007428 ORTHO05D009308 9.0e-29 130.2 94 69.1
TAR375G0610 Trochodendron aralioides HOM05D007428 ORTHO05D009308 9.0e-29 130.2 93 68.8
Aa31LG9G500 Aethionema arabicum HOM05D007428 ORTHO05D009308 1.2e-28 129.8 98 69.4
RcHm_v2.0_Chr7g0196601 Rosa chinensis HOM05D007428 ORTHO05D009308 1.2e-28 129.8 99 69.7
BcaC02g08952 Brassica carinata HOM05D007428 ORTHO05D009308 1.5e-28 129.4 97 68.0
C04p48540 Brassica napus HOM05D007428 ORTHO05D009308 1.5e-28 129.4 97 68.0
BolC4t26447H Brassica oleracea HOM05D007428 ORTHO05D009308 1.5e-28 129.4 97 68.0
PGR031G0112 Punica granatum HOM05D007428 ORTHO05D009308 2.6e-28 128.6 94 69.1
SEGI_01808 Sequoiadendron giganteum HOM05D007428 ORTHO05D009308 2.6e-28 128.6 93 67.7
A04p14670 Brassica napus HOM05D007428 ORTHO05D009308 4.4e-28 127.9 94 69.1
BraA04t17107Z Brassica rapa HOM05D007428 ORTHO05D009308 4.4e-28 127.9 94 69.1
PGSC0003DMG400005826 Solanum tuberosum HOM05D007428 ORTHO05D009308 5.8e-28 127.5 94 69.1
EL10Ac4g10178 Beta vulgaris HOM05D007428 ORTHO05D009308 1.3e-27 126.3 94 69.1
Thhalv10028001m.g Eutrema salsugineum HOM05D007428 ORTHO05D009308 1.3e-27 126.3 94 69.1
Gohir.D03G078400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 1.7e-27 125.9 94 69.1
Gorai.003G085700 Gossypium raimondii HOM05D007428 ORTHO05D009308 1.7e-27 125.9 94 69.1
CSS0042206 Camellia sinensis var. sinensis HOM05D007428 ORTHO05D009308 2.2e-27 125.6 96 67.7
ECA246G0502 Erigeron canadensis HOM05D007428 ORTHO05D009308 2.2e-27 125.6 92 68.5
Solyc08g008120.4 Solanum lycopersicum HOM05D007428 ORTHO05D009308 2.2e-27 125.6 94 68.1
Sopen08g003980 Solanum pennellii HOM05D007428 ORTHO05D009308 2.2e-27 125.6 94 68.1
Lsat_1_v5_gn_3_8800 Lactuca sativa HOM05D007428 ORTHO05D009308 2.9e-27 125.2 86 70.9
Cfa012244 Carpinus fangiana HOM05D007428 ORTHO05D009308 3.8e-27 124.8 95 69.5
CDE04G2716 Ceratophyllum demersum HOM05D007428 ORTHO05D009308 6.4e-27 124.0 94 71.3
Sp7g00480 Schrenkiella parvula HOM05D007428 ORTHO05D009308 6.4e-27 124.0 98 65.3
Duzib084G1020 Durio zibethinus HOM05D007428 ORTHO05D009308 8.4e-27 123.6 94 68.1
Nn6g32110 Nelumbo nucifera HOM05D007428 ORTHO05D009308 1.4e-26 122.9 81 79.0
Rhsim02G0235600 Rhododendron simsii HOM05D007428 ORTHO05D009308 1.4e-26 122.9 144 48.6
Lalb_Chr25g0287261 Lupinus albus HOM05D007428 ORTHO05D009308 2.4e-26 122.1 94 68.1
Carub.0007s3391 Capsella rubella HOM05D007428 ORTHO05D009308 4.2e-26 121.3 98 63.3
Duzib205G1701 Durio zibethinus HOM05D007428 ORTHO05D009308 4.2e-26 121.3 94 67.0
CARHR287610 Cardamine hirsuta HOM05D007428 ORTHO05D009308 5.4e-26 120.9 98 63.3
Phvul.001G130100 Phaseolus vulgaris HOM05D007428 ORTHO05D009308 7.1e-26 120.6 94 66.0
HPP92_001758 Vanilla planifolia HOM05D007428 ORTHO05D009308 9.3e-26 120.2 96 63.5
MD06G1090900 Malus domestica HOM05D007428 ORTHO05D009308 1.2e-25 119.8 99 64.6
AT5G41560 Arabidopsis thaliana HOM05D007428 ORTHO05D009308 1.6e-25 119.4 98 63.3
DCAR_005573 Daucus carota HOM05D007428 ORTHO05D009308 2.1e-25 119.0 93 66.7
Eucgr.D01813 Eucalyptus grandis HOM05D007428 ORTHO05D009308 2.7e-25 118.6 93 66.7
Gohir.D08G134500 Gossypium hirsutum HOM05D001458 ORTHO05D008462 2.7e-25 118.6 94 66.0
AL7G47840 Arabidopsis lyrata HOM05D007428 ORTHO05D009308 3.5e-25 118.2 98 62.2
ClCG01G002350 Citrullus lanatus HOM05D007428 ORTHO05D009308 3.5e-25 118.2 100 62.0
MELO3C005713.2 Cucumis melo HOM05D007428 ORTHO05D009308 6.0e-25 117.5 100 62.0
CsaV3_5G002410 Cucumis sativus L. HOM05D007428 ORTHO05D009308 6.0e-25 117.5 100 62.0
Medtr7g091260 Medicago truncatula HOM05D007428 ORTHO05D009308 1.3e-24 116.3 94 66.0
arahy.Tifrunner.gnm1.ann1.I9CJRL Arachis hypogaea HOM05D007428 ORTHO05D009308 1.7e-24 115.9 91 65.9
CiPaw.12G089300 Carya illinoinensis HOM05D007428 ORTHO05D009308 1.7e-24 115.9 96 63.5
Glyma.19G137300 Glycine max HOM05D007428 ORTHO05D009308 2.3e-24 115.5 94 62.8
Gohir.A08G114300 Gossypium hirsutum HOM05D007428 ORTHO05D009308 3.0e-24 115.2 94 63.8
TPR.G18241 Trifolium pratense HOM05D007428 ORTHO05D009308 3.9e-24 114.8 94 63.8
Zm00001eb001890 Zea mays HOM05D007428 ORTHO05D009308 5.1e-24 114.4 97 64.9
QL12p031804 Quercus lobata HOM05D007428 ORTHO05D009308 6.6e-24 114.0 133 49.6
Glyma.03G134700 Glycine max HOM05D007428 ORTHO05D009308 3.3e-23 111.7 98 63.3
Lj1g0002351 Lotus japonicus HOM05D007428 ORTHO05D009308 4.3e-23 111.3 89 61.8
Cc08_g15240 Coffea canephora HOM05D007428 ORTHO05D009308 9.6e-23 110.2 97 59.8
Hma1.2p1_0216F.1_g091060 Hydrangea macrophylla HOM05D007428 ORTHO05D009308 3.6e-22 108.2 97 63.9
arahy.Tifrunner.gnm1.ann1.LGCW4P Arachis hypogaea HOM05D007428 ORTHO05D009308 4.8e-22 107.8 105 58.1
Sed0012859 Sechium edule HOM05D007428 ORTHO05D009308 6.2e-22 107.5 100 58.0
Zm00001eb403670 Zea mays HOM05D007428 ORTHO05D009308 6.2e-22 107.5 99 62.6
SMO117G0109 Selaginella moellendorffii HOM05D007428 ORTHO05D009308 2.4e-21 105.5 85 64.7
SalBow8G4511 Salvia bowleyana HOM05D005196 ORTHO05D006107 6.9e-21 104.0 97 59.8
Os03g0125700 Oryza sativa ssp. japonica HOM05D007428 ORTHO05D009308 1.3e-19 99.8 96 56.2
Duzib068G1017 Durio zibethinus HOM05D007428 ORTHO05D009308 2.9e-19 98.6 71 70.4
HPP92_003464 Vanilla planifolia HOM05D007428 ORTHO05D009308 3.8e-19 98.2 67 71.6
SGA_v2.0_scaffold111G31471 Striga asiatica HOM05D007428 ORTHO05D009308 4.9e-19 97.8 83 60.2
Ah.06g194380 Amaranthus hybridus HOM05D007428 ORTHO05D009308 1.1e-18 96.7 159 40.3
FAN08G3453 Fragaria x ananassa HOM05D005196 ORTHO05D006107 1.1e-18 96.7 72 69.4
COL.COLO4_08363 Corchorus olitorius HOM05D007428 ORTHO05D009308 9.3e-18 93.6 63 71.4
FvH4_5g03180 Fragaria vesca HOM05D007428 ORTHO05D009308 9.3e-18 93.6 68 72.1
Gorai.004G137700 Gossypium raimondii HOM05D007428 ORTHO05D009308 4.6e-17 91.3 71 64.8
Nitab4.5_0007906g0040 Nicotiana tabacum HOM05D007428 ORTHO05D009308 1.1e-15 86.7 95 53.7
DCAR_008355 Daucus carota HOM05D001458 ORTHO05D008462 1.3e-14 83.2 70 62.9
MD14G1111700 Malus domestica HOM05D007428 ORTHO05D009308 1.6e-14 82.8 67 64.2
Hund14271 Selenicereus undatus HOM05D007428 ORTHO05D009308 3.7e-14 81.6 70 62.9
Cfa012240 Carpinus fangiana HOM05D007428 ORTHO05D009308 8.1e-14 80.5 64 67.2
MBI17_g11952_MAGBIO Magnolia biondii HOM05D007428 ORTHO05D009308 4.5e-12 74.7 50 72.0
Gohir.A02G105400 Gossypium hirsutum HOM05D007428 ORTHO05D009308 2.2e-11 72.4 55 67.3
Sc01g0009840 Simmondsia chinensis HOM05D007428 ORTHO05D009308 1.4e-10 69.7 50 68.0
Thecc.03G286400 Theobroma cacao HOM05D007428 ORTHO05D009308 1.9e-10 69.3 50 70.0
vmacro11409 Vaccinium macrocarpon HOM05D007428 ORTHO05D009308 5.5e-10 67.8 47 70.2
CAN.G792.73 Capsicum annuum HOM05D003118 ORTHO05D009308 1.6e-09 66.2 45 73.3
HanXRQChr17g0533231 Helianthus annuus HOM05D007428 ORTHO05D009308 1.3e-08 63.2 57 61.4


User provided reference genes

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