Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.2e-261 906.0 456 100.0
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 8.2e-255 883.2 460 97.2
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 1.5e-232 809.3 427 89.9
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 2.0e-232 808.9 451 88.2
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 7.0e-230 800.4 429 88.6
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.2e-229 799.7 451 84.3
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 4.6e-229 797.7 452 83.8
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 7.8e-229 797.0 456 83.8
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 7.8e-229 797.0 423 88.9
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 1.7e-228 795.8 429 88.1
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 2.3e-228 795.4 426 87.6
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 8.6e-228 793.5 450 84.2
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.5e-227 792.7 427 88.8
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 9.5e-227 790.0 429 86.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.2e-226 789.6 456 83.3
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 2.1e-226 788.9 426 87.3
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.1e-226 788.9 425 87.8
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 3.6e-226 788.1 427 86.9
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 3.6e-226 788.1 424 87.5
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 4.7e-226 787.7 429 86.0
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 6.2e-226 787.3 425 87.5
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 8.0e-226 786.9 450 83.3
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 8.0e-226 786.9 429 86.0
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 8.0e-226 786.9 456 82.9
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 1.0e-225 786.6 429 86.5
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 1.8e-225 785.8 429 85.8
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.8e-225 785.8 425 87.3
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 2.3e-225 785.4 426 86.6
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 2.3e-225 785.4 427 87.4
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 2.3e-225 785.4 427 87.4
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 3.1e-225 785.0 427 86.7
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 4.0e-225 784.6 456 82.2
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 8.9e-225 783.5 428 85.0
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 8.9e-225 783.5 426 87.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.2e-224 783.1 453 82.3
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 2.0e-224 782.3 428 86.4
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.6e-224 781.9 454 82.4
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 4.4e-224 781.2 425 87.3
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 4.4e-224 781.2 427 86.2
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 5.8e-224 780.8 448 83.9
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 9.8e-224 780.0 426 86.2
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 9.8e-224 780.0 429 86.0
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 9.8e-224 780.0 429 86.9
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 1.3e-223 779.6 431 85.6
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.3e-223 779.6 429 85.3
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 2.2e-223 778.9 424 86.6
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 4.9e-223 777.7 426 86.4
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 4.9e-223 777.7 425 86.4
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 4.9e-223 777.7 429 85.1
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 4.9e-223 777.7 424 86.6
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 8.3e-223 776.9 427 86.2
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.1e-222 776.5 429 85.8
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 1.4e-222 776.2 426 85.9
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.4e-222 776.2 429 85.3
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 3.2e-222 775.0 455 82.0
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 4.1e-222 774.6 454 81.3
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 5.4e-222 774.2 453 81.9
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 7.0e-222 773.9 429 85.3
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 9.2e-222 773.5 454 81.5
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 2.7e-221 771.9 415 87.5
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 6.0e-221 770.8 453 81.2
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 1.7e-220 769.2 429 84.4
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.3e-220 768.8 425 85.9
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 5.0e-220 767.7 429 84.4
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 6.6e-220 767.3 429 84.1
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 1.1e-219 766.5 456 80.5
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 2.5e-219 765.4 447 82.6
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 7.3e-219 763.8 425 84.7
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 4.7e-218 761.1 453 80.8
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 1.1e-217 760.0 416 85.3
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 7.5e-216 753.8 424 84.7
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.3e-215 753.1 451 79.2
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 7.8e-213 743.8 450 80.0
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 7.8e-213 743.8 424 81.8
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 3.9e-212 741.5 454 77.8
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 2.8e-210 735.3 425 82.6
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 4.7e-210 734.6 425 80.7
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.4e-209 733.0 428 79.9
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 2.3e-209 732.3 399 86.2
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 5.8e-208 727.6 401 85.8
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 8.4e-207 723.8 427 79.9
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 2.1e-205 719.2 424 79.0
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.1e-205 719.2 421 79.6
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 6.0e-205 717.6 489 73.8
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 1.6e-202 709.5 423 78.3
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.8e-201 706.1 475 74.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 1.5e-200 703.0 442 78.7
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 3.5e-197 691.8 382 86.1
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.3e-195 685.3 429 76.5
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 3.1e-193 678.7 458 73.1
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 5.8e-192 674.5 556 65.5
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 2.7e-189 665.6 368 85.6
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 1.8e-188 662.9 395 80.3
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 6.9e-185 651.0 387 81.1
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 2.6e-184 649.0 421 72.0
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 4.9e-183 644.8 425 73.2
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 4.6e-181 638.3 357 84.3
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.2e-175 619.4 402 74.9
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 1.5e-168 596.7 421 66.0
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 2.9e-167 592.4 424 66.5
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 4.2e-166 588.6 377 77.5
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 5.3e-161 571.6 487 63.7
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 4.0e-140 502.3 272 87.1
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 7.5e-139 498.0 268 88.4
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 6.3e-138 495.0 266 88.0
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 4.5e-136 488.8 429 59.2
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 1.7e-135 486.9 374 62.0
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 5.4e-113 412.1 227 86.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 1.2e-64 251.5 190 68.4
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 3.5e-64 250.0 147 77.6
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 1.5e-59 234.6 143 74.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.5e-41 174.1 90 86.7
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 3.7e-29 133.7 79 77.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 8.0e-24 115.9 70 75.7
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.7e-18 98.2 57 78.9
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 6.1e-16 89.7 49 85.7
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 6.3e-13 79.7 43 86.0
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.4e-12 78.6 42 85.7
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 2.4e-12 77.8 42 83.3
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 4.7e-08 63.5 40 77.5


User provided reference genes

Program Settings