Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0569 Papaver somniferum HOM05D004012 ORTHO05D004752 1.4e-78 296.2 147 100.0
PSO210G3799 Papaver somniferum HOM05D004012 ORTHO05D004752 4.7e-18 95.1 57 84.2
PSO761G0211 Papaver somniferum HOM05D004012 ORTHO05D004752 4.7e-18 95.1 57 84.2
Nn5g27391 Nelumbo nucifera HOM05D004012 ORTHO05D004752 2.4e-14 82.8 57 70.2
TAR376G0099 Trochodendron aralioides HOM05D004012 ORTHO05D004752 5.4e-14 81.6 57 70.2
MBI10_g20270_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 7.0e-14 81.3 54 70.4
EL10Ac4g09708 Beta vulgaris HOM05D004012 ORTHO05D004752 9.2e-14 80.9 62 66.1
Sc16g0009950 Simmondsia chinensis HOM05D004012 ORTHO05D004752 9.2e-14 80.9 57 70.2
Haze_19373 Corylus avellana HOM05D004012 ORTHO05D004752 1.2e-13 80.5 57 70.2
vmacro21003 Vaccinium macrocarpon HOM05D004012 ORTHO05D004752 1.2e-13 80.5 62 64.5
Aqoxy5G01862 Aquilegia oxysepala HOM05D004012 ORTHO05D004752 1.6e-13 80.1 54 70.4
CSS0025733 Camellia sinensis var. sinensis HOM05D004012 ORTHO05D004752 1.6e-13 80.1 57 68.4
AUR62000581 Chenopodium quinoa HOM05D004012 ORTHO05D004752 1.6e-13 80.1 57 70.2
AUR62006937 Chenopodium quinoa HOM05D004012 ORTHO05D004752 1.6e-13 80.1 57 70.2
Migut.D01135 Erythranthe guttata HOM05D004012 ORTHO05D004752 1.6e-13 80.1 54 68.5
Gohir.A10G084900 Gossypium hirsutum HOM05D004012 ORTHO05D004752 1.6e-13 80.1 57 70.2
Gohir.D10G106700 Gossypium hirsutum HOM05D004012 ORTHO05D004752 1.6e-13 80.1 57 70.2
Gorai.011G116800 Gossypium raimondii HOM05D004012 ORTHO05D004752 1.6e-13 80.1 57 70.2
MBI06_g32154_MAGBIO Magnolia biondii HOM05D004012 ORTHO05D004752 1.6e-13 80.1 54 70.4
Dinv19127 Davidia involucrata HOM05D004012 ORTHO05D004752 2.0e-13 79.7 57 68.4
QL10p034885 Quercus lobata HOM05D004012 ORTHO05D000004 2.0e-13 79.7 57 68.4
Rhsim01G0147700 Rhododendron simsii HOM05D004012 ORTHO05D004752 2.0e-13 79.7 57 68.4
HPP92_005635 Vanilla planifolia HOM05D004012 ORTHO05D004752 2.0e-13 79.7 57 70.2
HPP92_005645 Vanilla planifolia HOM05D004012 ORTHO05D004752 2.0e-13 79.7 57 70.2
Actinidia12239 Actinidia chinensis HOM05D004012 ORTHO05D004752 2.7e-13 79.3 57 68.4
Actinidia14359 Actinidia chinensis HOM05D004012 ORTHO05D004752 2.7e-13 79.3 57 68.4
Duzib264G1318 Durio zibethinus HOM05D004012 ORTHO05D004752 2.7e-13 79.3 84 51.2
Lalb_Chr19g0127941 Lupinus albus HOM05D004012 ORTHO05D004752 2.7e-13 79.3 57 70.2
SalBow1G0131 Salvia bowleyana HOM05D004012 ORTHO05D004752 2.7e-13 79.3 54 68.5
SGA_v2.0_scaffold14G07064 Striga asiatica HOM05D004012 ORTHO05D004752 2.7e-13 79.3 54 68.5
Thecc.01G145600 Theobroma cacao HOM05D004012 ORTHO05D004752 2.7e-13 79.3 57 70.2
CiPaw.15G186100 Carya illinoinensis HOM05D004012 ORTHO05D004752 3.5e-13 79.0 57 70.2
FvH4_5g20280 Fragaria vesca HOM05D004012 ORTHO05D004752 3.5e-13 79.0 57 68.4
FAN04G0350 Fragaria x ananassa HOM05D004012 ORTHO05D004752 3.5e-13 79.0 57 68.4
FAN18G2241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 3.5e-13 79.0 57 68.4
Lalb_Chr03g0037441 Lupinus albus HOM05D004012 ORTHO05D004752 3.5e-13 79.0 57 68.4
Prupe.5G058000 Prunus persica HOM05D004012 ORTHO05D004752 3.5e-13 79.0 57 68.4
Hund07194 Selenicereus undatus HOM05D004012 ORTHO05D004752 3.5e-13 79.0 57 68.4
Nitab4.5_0000064g0100 Nicotiana tabacum HOM05D004012 ORTHO05D004752 4.5e-13 78.6 54 66.7
Nitab4.5_0005261g0020 Nicotiana tabacum HOM05D004012 ORTHO05D004752 4.5e-13 78.6 54 66.7
Phvul.007G277800 Phaseolus vulgaris HOM05D004012 ORTHO05D004752 4.5e-13 78.6 57 68.4
CANSAT54G0087 Cannabis sativa HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 68.4
CAN.G10.8 Capsicum annuum HOM05D004012 ORTHO05D004752 5.9e-13 78.2 54 66.7
ClCG02G000230 Citrullus lanatus HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 68.4
Ciclev10005092m.g Citrus clementina HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 66.7
MELO3C023211.2 Cucumis melo HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 68.4
CsaV3_2G019600 Cucumis sativus L. HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 68.4
HanXRQChr13g0402671 Helianthus annuus HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 66.7
Lsat_1_v5_gn_0_9061 Lactuca sativa HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 66.7
Lsat_1_v5_gn_5_118080 Lactuca sativa HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 66.7
Manes.13G154600 Manihot esculenta HOM05D004012 ORTHO05D004752 5.9e-13 78.2 54 70.4
Solyc04g024510.3 Solanum lycopersicum HOM05D004012 ORTHO05D004752 5.9e-13 78.2 54 66.7
Sopen04g017040 Solanum pennellii HOM05D004012 ORTHO05D004752 5.9e-13 78.2 54 66.7
VMungo0720G3057 Vigna mungo HOM05D004012 ORTHO05D004752 5.9e-13 78.2 57 68.4
Actinidia30855 Actinidia chinensis HOM05D004012 ORTHO05D004752 7.8e-13 77.8 57 68.4
arahy.Tifrunner.gnm1.ann1.5Q2P9B Arachis hypogaea HOM05D004012 ORTHO05D004752 7.8e-13 77.8 84 51.2
arahy.Tifrunner.gnm1.ann1.EZQ64B Arachis hypogaea HOM05D004012 ORTHO05D004752 7.8e-13 77.8 84 51.2
ECA238G2948 Erigeron canadensis HOM05D004012 ORTHO05D004752 7.8e-13 77.8 57 68.4
Glyma.10G003500 Glycine max HOM05D004012 ORTHO05D004752 7.8e-13 77.8 57 66.7
Oeu034405.1 Olea europaea HOM05D004012 ORTHO05D004752 7.8e-13 77.8 57 64.9
Potri.017G122600 Populus trichocarpa HOM05D004012 ORTHO05D004752 7.8e-13 77.8 57 68.4
Atru.chr3.1437 Acer truncatum HOM05D004012 ORTHO05D004752 1.0e-12 77.4 57 66.7
Duzib187G0370 Durio zibethinus HOM05D004012 ORTHO05D004752 1.0e-12 77.4 84 50.0
Eucgr.I00032 Eucalyptus grandis HOM05D004012 ORTHO05D004752 1.0e-12 77.4 54 66.7
Eucgr.I00085 Eucalyptus grandis HOM05D004012 ORTHO05D004752 1.0e-12 77.4 54 66.7
ATR1089G159 Amborella trichopoda HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 66.7
Cc07_g20480 Coffea canephora HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 64.9
Cc07_g20580 Coffea canephora HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 66.7
DCAR_019944 Daucus carota HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 66.7
Lj4A823T24 Lonicera japonica HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 64.9
Lalb_Chr01g0020921 Lupinus albus HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 64.9
Potri.004G092400 Populus trichocarpa HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 66.7
GSVIVG01000257001 Vitis vinifera HOM05D004012 ORTHO05D004752 1.3e-12 77.0 57 66.7
DCAR_009624 Daucus carota HOM05D004012 ORTHO05D004752 1.7e-12 76.6 57 64.9
Duzib147G1077 Durio zibethinus HOM05D004012 ORTHO05D004752 1.7e-12 76.6 57 66.7
Sabra04G0062100 Salix brachista HOM05D004012 ORTHO05D004752 1.7e-12 76.6 57 66.7
TWI79G0644 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 1.7e-12 76.6 54 70.4
MSTRG.4671 Avicennia marina HOM05D004012 ORTHO05D004752 2.3e-12 76.3 54 64.8
Glyma.02G005000 Glycine max HOM05D004012 ORTHO05D004752 2.3e-12 76.3 57 64.9
Hma1.2p1_0513F.1_g169610 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 2.3e-12 76.3 57 64.9
Hma1.2p1_3052F.1_g332140 Hydrangea macrophylla HOM05D004012 ORTHO05D004752 2.3e-12 76.3 57 64.9
Lj6g0017875 Lotus japonicus HOM05D004012 ORTHO05D004752 2.3e-12 76.3 57 64.9
RcHm_v2.0_Chr7g0205341 Rosa chinensis HOM05D004012 ORTHO05D004752 2.3e-12 76.3 57 64.9
DCAR_015558 Daucus carota HOM05D004012 ORTHO05D004752 2.9e-12 75.9 57 63.2
MD04G1052500 Malus domestica HOM05D004012 ORTHO05D004752 3.8e-12 75.5 57 66.7
Ca_12160_v3 Cicer arietinum L. HOM05D004012 ORTHO05D004752 5.0e-12 75.1 54 68.5
Thhalv10013606m.g Eutrema salsugineum HOM05D004012 ORTHO05D004752 5.0e-12 75.1 57 63.2
FAN08G1522 Fragaria x ananassa HOM05D004012 ORTHO05D004752 5.0e-12 75.1 57 66.7
TWI31G0701 Tripterygium wilfordii HOM05D004012 ORTHO05D004752 5.0e-12 75.1 54 66.7
Dinv26833 Davidia involucrata HOM05D004012 ORTHO05D004752 6.6e-12 74.7 57 64.9
Peaxi162Scf00621g00413 Petunia axillaris HOM05D004012 ORTHO05D004752 8.6e-12 74.3 54 63.0
Sabra17G0101400 Salix brachista HOM05D004012 ORTHO05D004752 8.6e-12 74.3 57 64.9
Sabra17G0104000 Salix brachista HOM05D004012 ORTHO05D004752 8.6e-12 74.3 57 64.9
Ah.02g118090 Amaranthus hybridus HOM05D004012 ORTHO05D004752 1.1e-11 73.9 84 50.0
CDE05G2224 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 1.1e-11 73.9 56 64.3
FAN13G1241 Fragaria x ananassa HOM05D004012 ORTHO05D004752 1.1e-11 73.9 46 78.3
Aa31LG11G11210 Aethionema arabicum HOM05D004012 ORTHO05D004752 1.5e-11 73.6 54 61.1
Medtr1g041405 Medicago truncatula HOM05D004012 ORTHO05D004752 1.5e-11 73.6 56 64.3
AL6G29670 Arabidopsis lyrata HOM05D004012 ORTHO05D004752 1.9e-11 73.2 57 61.4
CARHR194600 Cardamine hirsuta HOM05D004012 ORTHO05D004752 1.9e-11 73.2 54 64.8
Mapoly0005s0018 Marchantia polymorpha HOM05D004012 ORTHO05D004752 1.9e-11 73.2 57 59.6
PGR119G2008 Punica granatum HOM05D004012 ORTHO05D004752 1.9e-11 73.2 54 63.0
Sp6g25900 Schrenkiella parvula HOM05D004012 ORTHO05D004752 1.9e-11 73.2 57 61.4
MD06G1047700 Malus domestica HOM05D004012 ORTHO05D004752 3.3e-11 72.4 57 64.9
BcaB08g36680 Brassica carinata HOM05D004012 ORTHO05D004752 4.3e-11 72.0 57 61.4
BcaC04g18693 Brassica carinata HOM05D004012 ORTHO05D004752 4.3e-11 72.0 57 61.4
MSTRG.9397 Avicennia marina HOM05D004012 ORTHO05D004752 5.6e-11 71.6 57 59.6
C09p58260 Brassica napus HOM05D004012 ORTHO05D004752 5.6e-11 71.6 57 61.4
BolC9t58691H Brassica oleracea HOM05D004012 ORTHO05D004752 5.6e-11 71.6 57 61.4
Os11g0240900 Oryza sativa ssp. japonica HOM05D004012 ORTHO05D004752 5.6e-11 71.6 49 67.3
SEGI_14103 Sequoiadendron giganteum HOM05D004012 ORTHO05D004752 5.6e-11 71.6 57 59.6
AT5G18420 Arabidopsis thaliana HOM05D004012 ORTHO05D004752 7.3e-11 71.2 53 62.3
Sed0016932 Sechium edule HOM05D004012 ORTHO05D004752 7.3e-11 71.2 77 51.9
AagrBONN_evm.TU.Sc2ySwM_228.2915 Anthoceros agrestis HOM05D004012 ORTHO05D004752 9.5e-11 70.9 46 71.7
Carub.0006s1668 Capsella rubella HOM05D004012 ORTHO05D004752 9.5e-11 70.9 57 59.6
CBR_g22449 Chara braunii HOM05D004012 ORTHO05D004752 9.5e-11 70.9 54 57.4
Psat6g104000 Pisum sativum HOM05D004012 ORTHO05D004752 9.5e-11 70.9 58 63.8
C03p10330 Brassica napus HOM05D004012 ORTHO05D004752 1.2e-10 70.5 54 63.0
BraA03t10211Z Brassica rapa HOM05D004012 ORTHO05D004752 1.2e-10 70.5 54 63.0
SMO196G0070 Selaginella moellendorffii HOM05D004012 ORTHO05D004752 2.1e-10 69.7 57 56.1
THA.LOC104806688 Tarenaya hassleriana HOM05D004012 ORTHO05D004752 2.1e-10 69.7 57 59.6
BolC3t13514H Brassica oleracea HOM05D004012 ORTHO05D004752 2.8e-10 69.3 54 61.1
A10p21150 Brassica napus HOM05D004012 ORTHO05D004752 4.7e-10 68.6 57 59.6
BraA10t44178Z Brassica rapa HOM05D004012 ORTHO05D004752 4.7e-10 68.6 57 59.6
TAR628G1247 Trochodendron aralioides HOM05D004012 ORTHO05D004752 1.4e-09 67.0 87 46.0
unitig_0.g354 Utricularia gibba HOM05D004012 ORTHO05D004752 1.4e-09 67.0 84 41.7
CDE05G3168 Ceratophyllum demersum HOM05D004012 ORTHO05D004752 2.3e-09 66.2 62 56.5
Pp3c20_12330 Physcomitrium patens HOM05D004012 ORTHO05D004752 3.1e-09 65.9 57 52.6
Pp3c24_6950 Physcomitrium patens HOM05D004012 ORTHO05D004752 2.0e-08 63.2 56 51.8
Pp3c23_1780 Physcomitrium patens HOM05D004012 ORTHO05D004752 2.6e-08 62.8 57 54.4
TPR.G25177 Trifolium pratense HOM05D004012 ORTHO05D004752 5.8e-08 61.6 57 57.9
Zm00001eb112220 Zea mays HOM05D004012 ORTHO05D004752 5.8e-08 61.6 80 42.5
Zm00001eb167940 Zea mays HOM05D004012 ORTHO05D004752 1.7e-07 60.1 84 38.1
SHI03103 Sapria himalayana HOM05D004012 ORTHO05D004752 1.4e-06 57.0 94 39.4


User provided reference genes

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