Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO761G0547 Papaver somniferum HOM05D003564 ORTHO05D005332 1.3e-120 436.4 221 100.0
PSO421G0363 Papaver somniferum HOM05D003564 ORTHO05D005332 1.0e-72 277.3 153 93.5
PSO673G0015 Papaver somniferum HOM05D003564 ORTHO05D005332 3.8e-72 275.4 153 92.2
PSO724G1094 Papaver somniferum HOM05D003564 ORTHO05D005332 6.1e-70 268.1 153 90.2
TWI73G0893 Tripterygium wilfordii HOM05D003564 ORTHO05D005332 3.8e-64 248.8 153 81.7
TAR633G1064 Trochodendron aralioides HOM05D003564 ORTHO05D005332 4.2e-63 245.4 153 81.0
COL.COLO4_34584 Corchorus olitorius HOM05D003564 ORTHO05D005332 5.5e-63 245.0 153 80.4
Dinv44265 Davidia involucrata HOM05D003564 ORTHO05D005332 9.4e-63 244.2 153 79.1
CSS0008875 Camellia sinensis var. sinensis HOM05D003564 ORTHO05D005332 2.1e-62 243.0 153 79.7
Hma1.2p1_0078F.1_g039870 Hydrangea macrophylla HOM05D003564 ORTHO05D005332 2.7e-62 242.7 153 79.1
GSVIVG01034964001 Vitis vinifera HOM05D003564 ORTHO05D005332 2.7e-62 242.7 153 78.4
MSTRG.21761 Avicennia marina HOM05D003564 ORTHO05D005332 6.1e-62 241.5 153 80.4
Dinv15142 Davidia involucrata HOM05D003564 ORTHO05D005332 6.1e-62 241.5 153 78.4
MSTRG.24826 Avicennia marina HOM05D003564 ORTHO05D005332 8.0e-62 241.1 153 77.8
HanXRQChr05g0146131 Helianthus annuus HOM05D003564 ORTHO05D005332 8.0e-62 241.1 153 78.4
RcHm_v2.0_Chr4g0425841 Rosa chinensis HOM05D003564 ORTHO05D005332 8.0e-62 241.1 153 79.7
ECA246G5316 Erigeron canadensis HOM05D003564 ORTHO05D005332 1.0e-61 240.7 156 76.9
SalBow5G4452 Salvia bowleyana HOM05D003564 ORTHO05D005332 1.0e-61 240.7 153 81.0
Manes.15G001800 Manihot esculenta HOM05D003564 ORTHO05D005332 1.8e-61 240.0 153 78.4
Nn3g21762 Nelumbo nucifera HOM05D003564 ORTHO05D005332 1.8e-61 240.0 153 79.1
QL06p012801 Quercus lobata HOM05D003564 ORTHO05D005332 1.8e-61 240.0 153 77.8
Sabra10G0114300 Salix brachista HOM05D003564 ORTHO05D005332 1.8e-61 240.0 156 77.6
Hma1.2p1_1400F.1_g280900 Hydrangea macrophylla HOM05D003564 ORTHO05D005332 2.3e-61 239.6 153 78.4
TWI09G1018 Tripterygium wilfordii HOM05D003564 ORTHO05D005332 2.3e-61 239.6 153 77.8
Potri.010G148100 Populus trichocarpa HOM05D003564 ORTHO05D005332 3.0e-61 239.2 153 79.1
CANSAT80G1613 Cannabis sativa HOM05D003564 ORTHO05D005332 5.2e-61 238.4 153 79.7
ClCG05G006670 Citrullus lanatus HOM05D003564 ORTHO05D005332 5.2e-61 238.4 153 79.1
PGR031G2439 Punica granatum HOM05D003564 ORTHO05D005332 5.2e-61 238.4 153 78.4
TAR362G0511 Trochodendron aralioides HOM05D003564 ORTHO05D005332 5.2e-61 238.4 153 78.4
Aqoxy2G02668 Aquilegia oxysepala HOM05D003564 ORTHO05D005332 6.7e-61 238.0 153 78.4
FvH4_4g20200 Fragaria vesca HOM05D003564 ORTHO05D005332 6.7e-61 238.0 153 77.8
FAN12G0614 Fragaria x ananassa HOM05D003564 ORTHO05D005332 6.7e-61 238.0 153 77.8
Manes.03G206800 Manihot esculenta HOM05D003564 ORTHO05D005332 6.7e-61 238.0 153 78.4
Gohir.A09G241000 Gossypium hirsutum HOM05D003564 ORTHO05D005332 8.8e-61 237.7 153 77.1
Oeu027343.1 Olea europaea HOM05D003564 ORTHO05D005332 8.8e-61 237.7 153 75.8
Sed0008581 Sechium edule HOM05D003564 ORTHO05D005332 8.8e-61 237.7 153 77.8
CANSAT78G0776 Cannabis sativa HOM05D003564 ORTHO05D005332 1.1e-60 237.3 153 75.8
MELO3C006726.2 Cucumis melo HOM05D003564 ORTHO05D005332 1.1e-60 237.3 153 79.1
FAN07G2223 Fragaria x ananassa HOM05D003564 ORTHO05D005332 1.1e-60 237.3 153 77.1
CsaV3_3G015300 Cucumis sativus L. HOM05D003564 ORTHO05D005332 1.5e-60 236.9 153 79.7
Migut.N00033 Erythranthe guttata HOM05D003564 ORTHO05D005332 1.5e-60 236.9 153 78.4
Actinidia13349 Actinidia chinensis HOM05D003564 ORTHO05D005332 2.0e-60 236.5 153 76.5
Potri.008G102800 Populus trichocarpa HOM05D003564 ORTHO05D005332 2.0e-60 236.5 151 79.5
Gohir.D09G241800 Gossypium hirsutum HOM05D003564 ORTHO05D005332 3.3e-60 235.7 153 76.5
Lj6A693T63 Lonicera japonica HOM05D003564 ORTHO05D005332 3.3e-60 235.7 153 77.8
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 3.3e-60 235.7 153 77.8
ATR0693G053 Amborella trichopoda HOM05D003564 ORTHO05D005332 4.4e-60 235.3 153 77.8
Duzib212G0473 Durio zibethinus HOM05D003564 ORTHO05D005332 4.4e-60 235.3 153 77.1
Cpa.g.sc9.29 Carica papaya HOM05D003564 ORTHO05D005332 9.7e-60 234.2 152 78.9
CiPaw.02G073000 Carya illinoinensis HOM05D003564 ORTHO05D005332 9.7e-60 234.2 153 78.4
Eucgr.H04065 Eucalyptus grandis HOM05D003564 ORTHO05D005332 9.7e-60 234.2 153 75.8
Sed0006353 Sechium edule HOM05D003564 ORTHO05D005332 9.7e-60 234.2 153 77.8
PSO673G0028 Papaver somniferum HOM05D003564 ORTHO05D015539 1.7e-59 233.4 152 78.3
Haze_01331 Corylus avellana HOM05D003564 ORTHO05D005332 2.2e-59 233.0 153 76.5
Haze_01336 Corylus avellana HOM05D003564 ORTHO05D005332 2.2e-59 233.0 153 76.5
Gorai.006G265300 Gossypium raimondii HOM05D003564 ORTHO05D005332 2.2e-59 233.0 153 75.2
PGR004G2289 Punica granatum HOM05D003564 ORTHO05D005332 2.2e-59 233.0 153 77.8
vmacro07948 Vaccinium macrocarpon HOM05D003564 ORTHO05D005332 2.2e-59 233.0 155 74.2
vmacro15172 Vaccinium macrocarpon HOM05D003564 ORTHO05D005332 2.8e-59 232.6 153 75.2
Actinidia18464 Actinidia chinensis HOM05D003564 ORTHO05D005332 3.7e-59 232.3 153 75.8
EL10Ac3g05000 Beta vulgaris HOM05D003564 ORTHO05D005332 3.7e-59 232.3 153 76.5
CSS0022249 Camellia sinensis var. sinensis HOM05D003564 ORTHO05D005332 3.7e-59 232.3 153 75.2
Lj6g0012179 Lotus japonicus HOM05D003564 ORTHO05D005332 3.7e-59 232.3 153 75.8
Ciclev10004815m.g Citrus clementina HOM05D003564 ORTHO05D005332 4.8e-59 231.9 153 75.8
PSO210G4867 Papaver somniferum HOM05D003564 ORTHO05D005332 4.8e-59 231.9 153 76.5
MD13G1150000 Malus domestica HOM05D003564 ORTHO05D005332 6.3e-59 231.5 153 76.5
unitig_22.g6346 Utricularia gibba HOM05D003564 ORTHO05D005332 6.3e-59 231.5 153 77.8
Hma1.2p1_0013F.1_g008310 Hydrangea macrophylla HOM05D003564 ORTHO05D005332 8.2e-59 231.1 153 75.2
Oeu046580.1 Olea europaea HOM05D003564 ORTHO05D005332 8.2e-59 231.1 153 77.1
Hund03137 Selenicereus undatus HOM05D003564 ORTHO05D005332 1.1e-58 230.7 153 77.8
THA.LOC104818876 Tarenaya hassleriana HOM05D003564 ORTHO05D005332 1.1e-58 230.7 153 75.8
Prupe.1G114000 Prunus persica HOM05D003564 ORTHO05D005332 1.4e-58 230.3 153 73.9
Peaxi162Scf00228g00614 Petunia axillaris HOM05D003564 ORTHO05D005332 1.8e-58 229.9 153 74.5
AUR62039254 Chenopodium quinoa HOM05D003564 ORTHO05D005332 2.4e-58 229.6 153 75.2
Cc03_g00640 Coffea canephora HOM05D003564 ORTHO05D005332 2.4e-58 229.6 155 76.1
Rhsim04G0241100 Rhododendron simsii HOM05D003564 ORTHO05D005332 2.4e-58 229.6 153 73.9
CiPaw.01G136200 Carya illinoinensis HOM05D003564 ORTHO05D005332 3.1e-58 229.2 153 76.5
Thecc.04G304400 Theobroma cacao HOM05D003564 ORTHO05D005332 3.1e-58 229.2 153 76.5
AL3G17620 Arabidopsis lyrata HOM05D003564 ORTHO05D005332 5.3e-58 228.4 153 72.5
BolC1t05602H Brassica oleracea HOM05D003564 ORTHO05D005332 5.3e-58 228.4 153 73.9
BraA01t04431Z Brassica rapa HOM05D003564 ORTHO05D005332 5.3e-58 228.4 153 73.9
Thhalv10020583m.g Eutrema salsugineum HOM05D003564 ORTHO05D005332 5.3e-58 228.4 153 73.9
Gohir.A01G035000 Gossypium hirsutum HOM05D003564 ORTHO05D005332 5.3e-58 228.4 153 75.2
AT3G06580 Arabidopsis thaliana HOM05D003564 ORTHO05D005332 7.0e-58 228.0 153 72.5
A05p41470 Brassica napus HOM05D003564 ORTHO05D005332 7.0e-58 228.0 153 73.2
DCAR_023360 Daucus carota HOM05D003564 ORTHO05D005332 7.0e-58 228.0 153 75.8
Nitab4.5_0000655g0040 Nicotiana tabacum HOM05D003564 ORTHO05D005332 7.0e-58 228.0 153 75.2
AUR62016236 Chenopodium quinoa HOM05D003564 ORTHO05D005332 9.1e-58 227.6 153 73.9
Peaxi162Scf00164g00106 Petunia axillaris HOM05D003564 ORTHO05D005332 9.1e-58 227.6 153 76.5
BraA05t22867Z Brassica rapa HOM05D003564 ORTHO05D005332 1.2e-57 227.3 153 73.2
Nitab4.5_0005111g0010 Nicotiana tabacum HOM05D003564 ORTHO05D005332 1.2e-57 227.3 153 75.2
C05p60630 Brassica napus HOM05D003564 ORTHO05D001609 1.6e-57 226.9 153 73.2
BolC5t34726H Brassica oleracea HOM05D003564 ORTHO05D005332 1.6e-57 226.9 153 73.2
Sp3g05510 Schrenkiella parvula HOM05D003564 ORTHO05D005332 1.6e-57 226.9 153 72.5
Hund11987 Selenicereus undatus HOM05D003564 ORTHO05D005332 1.6e-57 226.9 153 73.9
CANSAT21G1208 Cannabis sativa HOM05D003564 ORTHO05D005332 2.0e-57 226.5 148 74.3
Cfa015286 Carpinus fangiana HOM05D003564 ORTHO05D005332 2.0e-57 226.5 155 76.1
Carub.0003s0604 Capsella rubella HOM05D003564 ORTHO05D005332 2.7e-57 226.1 153 71.9
Gohir.D01G023559 Gossypium hirsutum HOM05D003564 ORTHO05D005332 2.7e-57 226.1 153 73.9
Gorai.002G030900 Gossypium raimondii HOM05D003564 ORTHO05D005332 2.7e-57 226.1 153 73.9
Oeu001157.1 Olea europaea HOM05D003564 ORTHO05D005332 2.7e-57 226.1 153 73.2
Ah.07g201490 Amaranthus hybridus HOM05D003564 ORTHO05D005332 3.5e-57 225.7 153 73.9
BNapus_Darmor_BZH_scaffold_118p00030 Brassica napus HOM05D003564 ORTHO05D001609 3.5e-57 225.7 153 72.5
DCAR_026993 Daucus carota HOM05D003564 ORTHO05D005332 3.5e-57 225.7 157 73.9
Lalb_Chr07g0181971 Lupinus albus HOM05D003564 ORTHO05D005332 3.5e-57 225.7 153 73.9
MD16G1150400 Malus domestica HOM05D003564 ORTHO05D005332 3.5e-57 225.7 153 73.9
Solyc01g058390.3 Solanum lycopersicum HOM05D003564 ORTHO05D005332 3.5e-57 225.7 153 74.5
CSS0008122 Camellia sinensis var. sinensis HOM05D003564 ORTHO05D015539 4.5e-57 225.3 158 72.2
Sc13g0007180 Simmondsia chinensis HOM05D003564 ORTHO05D005332 4.5e-57 225.3 153 75.2
CARHR081120 Cardamine hirsuta HOM05D003564 ORTHO05D005332 7.7e-57 224.6 153 71.9
Ciclev10004814m.g Citrus clementina HOM05D003564 ORTHO05D005332 7.7e-57 224.6 153 72.5
unitig_8.g3092 Utricularia gibba HOM05D001060 ORTHO05D000905 1.0e-56 224.2 153 74.5
Sopen01g023960 Solanum pennellii HOM05D003564 ORTHO05D005332 1.3e-56 223.8 153 73.9
PGSC0003DMG400017095 Solanum tuberosum HOM05D003564 ORTHO05D005332 1.7e-56 223.4 153 73.9
Rhsim02G0002600 Rhododendron simsii HOM05D003564 ORTHO05D005332 2.2e-56 223.0 153 73.2
Aa31LG5G17120 Aethionema arabicum HOM05D003564 ORTHO05D005332 2.9e-56 222.6 153 71.9
Atru.chr5.3350 Acer truncatum HOM05D003564 ORTHO05D005332 3.8e-56 222.2 153 72.5
Lj3A833G36 Lonicera japonica HOM05D003564 ORTHO05D005332 6.5e-56 221.5 153 73.9
Nitab4.5_0004165g0030 Nicotiana tabacum HOM05D003564 ORTHO05D005332 6.5e-56 221.5 155 73.5
Lsat_1_v5_gn_6_116000 Lactuca sativa HOM05D003564 ORTHO05D005332 8.5e-56 221.1 153 73.9
arahy.Tifrunner.gnm1.ann1.W3XDQ4 Arachis hypogaea HOM05D003564 ORTHO05D005332 1.1e-55 220.7 153 72.5
Psat4g021800 Pisum sativum HOM05D003564 ORTHO05D005332 1.1e-55 220.7 153 73.9
TPR.G25421 Trifolium pratense HOM05D003564 ORTHO05D005332 1.5e-55 220.3 153 73.2
Lj4g0010100 Lotus japonicus HOM05D003564 ORTHO05D005332 3.2e-55 219.2 153 72.5
Lalb_Chr12g0200801 Lupinus albus HOM05D003564 ORTHO05D005332 4.2e-55 218.8 153 72.5
Phvul.003G116700 Phaseolus vulgaris HOM05D003564 ORTHO05D005332 4.2e-55 218.8 153 72.5
VMungo1215G0911 Vigna mungo HOM05D003564 ORTHO05D005332 4.2e-55 218.8 153 71.9
arahy.Tifrunner.gnm1.ann1.5PE0GF Arachis hypogaea HOM05D003564 ORTHO05D005332 5.5e-55 218.4 153 71.9
Ca_21413_v3 Cicer arietinum L. HOM05D003564 ORTHO05D005332 5.5e-55 218.4 153 72.5
Medtr4g122670 Medicago truncatula HOM05D003564 ORTHO05D005332 5.5e-55 218.4 153 71.9
CSS0033456 Camellia sinensis var. sinensis HOM05D003564 ORTHO05D015539 2.1e-54 216.5 149 71.8
HPP92_001226 Vanilla planifolia HOM05D003564 ORTHO05D005332 2.1e-54 216.5 153 71.2
Atru.BG.89.p Acer truncatum HOM05D003564 ORTHO05D005332 3.6e-54 215.7 153 73.2
Glyma.07G237700 Glycine max HOM05D003564 ORTHO05D005332 4.7e-54 215.3 153 71.2
A03p34740 Brassica napus HOM05D003564 ORTHO05D005332 8.0e-54 214.5 153 68.6
Glyma.17G035800 Glycine max HOM05D003564 ORTHO05D005332 1.4e-53 213.8 153 71.2
Zm00001eb063430 Zea mays HOM05D003564 ORTHO05D005332 1.8e-53 213.4 153 71.2
BraA03t12654Z Brassica rapa HOM05D003564 ORTHO05D005332 2.3e-53 213.0 153 68.0
SEGI_35047 Sequoiadendron giganteum HOM05D003564 ORTHO05D005332 2.3e-53 213.0 153 71.9
Os03g0832600 Oryza sativa ssp. japonica HOM05D003564 ORTHO05D005332 3.0e-53 212.6 156 69.9
CAN.G281.5 Capsicum annuum HOM05D003564 ORTHO05D005332 4.0e-53 212.2 153 69.9
Sabra08G0077700 Salix brachista HOM05D003564 ORTHO05D005332 1.2e-52 210.7 204 58.3
SHI00111 Sapria himalayana HOM05D003564 ORTHO05D005332 1.2e-52 210.7 153 68.0
CDE01G0090 Ceratophyllum demersum HOM05D003564 ORTHO05D005332 1.3e-51 207.2 153 68.0
Aa31LG2G16960 Aethionema arabicum HOM05D003564 ORTHO05D005332 6.3e-51 204.9 134 74.6
Nitab4.5_0000647g0260 Nicotiana tabacum HOM05D003564 ORTHO05D005332 1.8e-50 203.4 184 59.8
Glyma.08G358766 Glycine max HOM05D003564 ORTHO05D015539 3.2e-47 192.6 148 66.9
SGA_v2.0_scaffold367G50068 Striga asiatica HOM05D003564 ORTHO05D005332 3.2e-47 192.6 153 67.3
AagrBONN_evm.TU.Sc2ySwM_117.3800 Anthoceros agrestis HOM05D003564 ORTHO05D005332 4.2e-47 192.2 153 63.4
Phvul.010G104600 Phaseolus vulgaris HOM05D003564 ORTHO05D015539 6.1e-46 188.3 146 66.4
Pp3c9_18770 Physcomitrium patens HOM05D003564 ORTHO05D005332 4.4e-44 182.2 153 59.5
SMO340G0013 Selaginella moellendorffii HOM05D003564 ORTHO05D005332 1.3e-43 180.6 153 60.1
SGA_v2.0_scaffold227G43230 Striga asiatica HOM05D003564 ORTHO05D005332 2.4e-42 176.4 109 80.7
Pp3c19_13990 Physcomitrium patens HOM05D003564 ORTHO05D005332 5.4e-42 175.3 153 58.2
CAN.G311.69 Capsicum annuum HOM05D003564 ORTHO05D005332 1.0e-40 171.0 109 78.9
Mapoly0068s0036 Marchantia polymorpha HOM05D003564 ORTHO05D005332 2.6e-36 156.4 154 57.8
Mapoly0046s0013 Marchantia polymorpha HOM05D003564 ORTHO05D005332 9.8e-36 154.5 151 56.3
Lsat_1_v5_gn_2_75340 Lactuca sativa HOM05D003564 ORTHO05D015539 3.2e-34 149.4 115 66.1
Lsat_1_v5_gn_1_7420 Lactuca sativa HOM05D003564 ORTHO05D001424 5.4e-34 148.7 115 65.2
CBR_g24145 Chara braunii HOM05D003564 ORTHO05D005332 1.7e-32 143.7 160 51.2
Sopen01g020110 Solanum pennellii HOM05D003564 ORTHO05D015539 1.4e-26 124.0 79 81.0
Thecc.02G173700 Theobroma cacao HOM05D003564 ORTHO05D005332 4.6e-25 119.0 70 87.1
BolC3t16502H Brassica oleracea HOM05D003564 ORTHO05D005332 3.3e-23 112.8 153 44.4
PRCOL_00002578 Prasinoderma coloniale HOM05D003564 ORTHO05D005332 5.6e-23 112.1 152 45.4
Cre17.g732300 Chlamydomonas reinhardtii HOM05D003564 ORTHO05D005332 4.7e-22 109.0 151 43.7
MCO14G377 Micromonas commoda HOM05D003564 ORTHO05D005332 1.5e-20 104.0 152 42.1
Lsat_1_v5_gn_5_163121 Lactuca sativa HOM05D003564 ORTHO05D230188 4.4e-20 102.4 90 58.9
TAR365G0167 Trochodendron aralioides HOM05D003564 ORTHO05D024794 3.2e-18 96.3 100 53.0
Hma1.2p1_0760F.1_g214160 Hydrangea macrophylla HOM05D003564 ORTHO05D015539 3.5e-17 92.8 81 60.5
Hma1.2p1_0014F.1_g009450 Hydrangea macrophylla HOM05D003564 ORTHO05D015539 1.3e-16 90.9 59 74.6
Hma1.2p1_0213F.1_g090610 Hydrangea macrophylla HOM05D003564 ORTHO05D015539 1.3e-16 90.9 81 59.3
Nn4g24851 Nelumbo nucifera HOM05D003564 ORTHO05D004901 6.8e-13 78.6 55 69.1
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 2.0e-12 77.0 58 63.8
HanXRQChr14g0435401 Helianthus annuus HOM05D003564 ORTHO05D015539 4.9e-11 72.4 60 63.3
SGA_v2.0_scaffold21G09441 Striga asiatica HOM05D000207 ORTHO05D000606 1.0e-08 64.7 46 65.2


User provided reference genes

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