Gene: Lsat_1_v5_gn_1_7420

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_1_7420
  • Transcript Identifier Lsat_1_v5_gn_1_7420.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_1 : 8861550-8867420 : positive

Gene Family Information

  • ID HOM05D003564
  • #Genes/#Species 192/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_1_7420.v5
  • pacid 38943145

Descriptions

  • Description 2.7.1.6 - Galactokinase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006012
ISO
PLAZA Homology (enrichment)galactose metabolic process HOM05D003564
GO:0046835
ISO
PLAZA Homology (enrichment)carbohydrate phosphorylation HOM05D003564

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D003564
GO:0016773
ISO
PLAZA Homology (enrichment)phosphotransferase activity, alcohol group as acceptor HOM05D003564
GO:0016301
ISO
PLAZA Homology (enrichment)kinase activity HOM05D003564
GO:0004335
ISO
PLAZA Homology (enrichment)galactokinase activity HOM05D003564

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISO
PLAZA Homology (enrichment)cytoplasm HOM05D003564

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011129 Cold shock domain
IPR036875 Zinc finger, CCHC-type superfamily
IPR001878 Zinc finger, CCHC-type
IPR002059 Cold-shock protein, DNA-binding
IPR012340 Nucleic acid-binding, OB-fold
Mapman id Description
16.7.1 RNA processing.RNA chaperone activities.RNA chaperone (CSP)
26.4.3.2 External stimuli response.temperature.cold response.cold-responsive mRNA chaperone (CSD)